RNA–Protein interactions for RNA: ENST00000433619.2

FAM3A-211, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-211ENST00000433619 TMEM241Q24JQ0 296 aa12.93□□□□□ -0.34
FAM3A-211ENST00000433619 DNAJC30Q96LL9 226 aa12.93□□□□□ -0.34
FAM3A-211ENST00000433619 DPH3P1Q9H4G8 78 aa12.93□□□□□ -0.34
FAM3A-211ENST00000433619 OSTCQ9NRP0 149 aa12.93□□□□□ -0.34
FAM3A-211ENST00000433619 H7C1H1 209 aa12.92□□□□□ -0.34
FAM3A-211ENST00000433619 MGPP08493 103 aa12.92□□□□□ -0.34
FAM3A-211ENST00000433619 SRSF3P84103 164 aaKnown RBP12.92□□□□□ -0.34
FAM3A-211ENST00000433619 SUMO4Q6EEV6 95 aa12.92□□□□□ -0.34
FAM3A-211ENST00000433619 NIT1Q86X76 327 aa12.92□□□□□ -0.34
FAM3A-211ENST00000433619 TRBV6-8A0A0A6YYG3 113 aa12.91□□□□□ -0.34
FAM3A-211ENST00000433619 LAGE3Q14657 143 aa12.91□□□□□ -0.34
FAM3A-211ENST00000433619 SPATA12Q7Z6I5 190 aa12.91□□□□□ -0.34
FAM3A-211ENST00000433619 DAZ4Q86SG3 579 aaKnown RBP12.91□□□□□ -0.34
FAM3A-211ENST00000433619 Q8N3U1 123 aa12.91□□□□□ -0.34
FAM3A-211ENST00000433619 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.91□□□□□ -0.34
FAM3A-211ENST00000433619 DAZ3Q9NR90 486 aaKnown RBP12.91□□□□□ -0.34
FAM3A-211ENST00000433619 PKHD1P08F94 4074 aa12.89□□□□□ -0.35
FAM3A-211ENST00000433619 FAM231BA6NCW3 169 aa12.89□□□□□ -0.35
FAM3A-211ENST00000433619 KRTAP10-2P60368 255 aa12.89□□□□□ -0.35
FAM3A-211ENST00000433619 TMEM97Q5BJF2 176 aa12.89□□□□□ -0.35
FAM3A-211ENST00000433619 RASL11AQ6T310 242 aa12.89□□□□□ -0.35
FAM3A-211ENST00000433619 TSKUQ8WUA8 353 aa12.89□□□□□ -0.35
FAM3A-211ENST00000433619 PGLYRP4Q96LB8 373 aa12.89□□□□□ -0.35
FAM3A-211ENST00000433619 CHCHD7Q9BUK0 85 aa12.89□□□□□ -0.35
FAM3A-211ENST00000433619 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
FAM3A-211ENST00000433619 A0A087WTM6 91 aa12.88□□□□□ -0.35
FAM3A-211ENST00000433619 C16orf90A8MZG2 172 aa12.88□□□□□ -0.35
FAM3A-211ENST00000433619 EREGO14944 169 aa12.88□□□□□ -0.35
FAM3A-211ENST00000433619 RPL23P62829 140 aaKnown RBP12.88□□□□□ -0.35
FAM3A-211ENST00000433619 NTM-AS1Q6ZSK4 140 aa12.88□□□□□ -0.35
FAM3A-211ENST00000433619 ISOC2Q96AB3 205 aa12.88□□□□□ -0.35
FAM3A-211ENST00000433619 NIT2Q9NQR4 276 aa12.88□□□□□ -0.35
FAM3A-211ENST00000433619 NAT8Q9UHE5 227 aa12.88□□□□□ -0.35
FAM3A-211ENST00000433619 URGCP-MRPS24S4R325 110 aa12.88□□□□□ -0.35
FAM3A-211ENST00000433619 C15orf54Q8N8G6 183 aa12.87□□□□□ -0.35
FAM3A-211ENST00000433619 Q9HAA7 133 aa12.87□□□□□ -0.35
FAM3A-211ENST00000433619 PGPEP1Q9NXJ5 209 aa12.87□□□□□ -0.35
FAM3A-211ENST00000433619 V9GYV3 84 aa12.87□□□□□ -0.35
FAM3A-211ENST00000433619 TRAV8-3A0A0A6YYJ7 113 aa12.86□□□□□ -0.35
FAM3A-211ENST00000433619 SMIM15Q7Z3B0 74 aa12.86□□□□□ -0.35
FAM3A-211ENST00000433619 FRZBQ92765 325 aa12.86□□□□□ -0.35
FAM3A-211ENST00000433619 A0A087WX48 190 aa12.85□□□□□ -0.35
FAM3A-211ENST00000433619 HIGD1CA8MV81 97 aa12.85□□□□□ -0.35
FAM3A-211ENST00000433619 TM2D2Q9BX73 214 aa12.85□□□□□ -0.35
FAM3A-211ENST00000433619 A0A1B0GUT8 65 aa12.84□□□□□ -0.35
FAM3A-211ENST00000433619 LRCOL1A6NCL2 159 aa12.84□□□□□ -0.35
FAM3A-211ENST00000433619 TMEM262E9PQX1 116 aa12.84□□□□□ -0.35
FAM3A-211ENST00000433619 PSCAO43653 123 aa12.84□□□□□ -0.35
FAM3A-211ENST00000433619 RAB14P61106 215 aa12.84□□□□□ -0.35
FAM3A-211ENST00000433619 ELOBQ15370 118 aa12.84□□□□□ -0.35
FAM3A-211ENST00000433619 KCNIP4Q6PIL6 250 aa12.84□□□□□ -0.35
FAM3A-211ENST00000433619 GATD1Q8NB37 220 aa12.84□□□□□ -0.35
FAM3A-211ENST00000433619 BORCS7Q96B45 105 aa12.84□□□□□ -0.35
FAM3A-211ENST00000433619 PKIAP61925 76 aa12.83□□□□□ -0.36
FAM3A-211ENST00000433619 ADIRFQ15847 76 aa12.83□□□□□ -0.36
FAM3A-211ENST00000433619 KLK12Q9UKR0 248 aa12.83□□□□□ -0.36
FAM3A-211ENST00000433619 DNAH11Q96DT5 4516 aa12.82□□□□□ -0.36
FAM3A-211ENST00000433619 IQCJQ1A5X6 159 aa12.82□□□□□ -0.36
FAM3A-211ENST00000433619 CHCHD5Q9BSY4 110 aa12.82□□□□□ -0.36
FAM3A-211ENST00000433619 TRBV25-1A0A075B6N4 114 aa12.81□□□□□ -0.36
FAM3A-211ENST00000433619 CDPF1Q6NVV7 123 aa12.81□□□□□ -0.36
FAM3A-211ENST00000433619 NUP35Q8NFH5 326 aa12.81□□□□□ -0.36
FAM3A-211ENST00000433619 TRAV26-2A0A0B4J265 109 aa12.8□□□□□ -0.36
FAM3A-211ENST00000433619 IGHV1-24A0A0C4DH33 117 aa12.8□□□□□ -0.36
FAM3A-211ENST00000433619 ATRAIDQ6UW56 229 aa12.8□□□□□ -0.36
FAM3A-211ENST00000433619 TMEM191AQ9H0A3 160 aa12.8□□□□□ -0.36
FAM3A-211ENST00000433619 COX11Q9Y6N1 276 aa12.8□□□□□ -0.36
FAM3A-211ENST00000433619 DYNC1H1Q14204 4646 aaKnown RBP12.79□□□□□ -0.36
FAM3A-211ENST00000433619 Q0VG73 95 aa12.79□□□□□ -0.36
FAM3A-211ENST00000433619 MPV17L2Q567V2 206 aa12.79□□□□□ -0.36
FAM3A-211ENST00000433619 RMI2Q96E14 147 aa12.79□□□□□ -0.36
FAM3A-211ENST00000433619 NAT8BQ9UHF3 227 aa12.79□□□□□ -0.36
FAM3A-211ENST00000433619 SMIM27A0A1W2PRY6 76 aa12.78□□□□□ -0.36
FAM3A-211ENST00000433619 RIGQ13278 110 aa12.78□□□□□ -0.36
FAM3A-211ENST00000433619 CLLU1Q5K131 121 aa12.78□□□□□ -0.36
FAM3A-211ENST00000433619 UBE2WQ96B02 151 aa12.78□□□□□ -0.36
FAM3A-211ENST00000433619 CDK2AP2O75956 126 aa12.77□□□□□ -0.37
FAM3A-211ENST00000433619 ENHOQ6UWT2 76 aa12.77□□□□□ -0.37
FAM3A-211ENST00000433619 MAPKAPK5-AS1Q8N8E1 139 aa12.77□□□□□ -0.37
FAM3A-211ENST00000433619 RPL39LQ96EH5 51 aaKnown RBP12.77□□□□□ -0.37
FAM3A-211ENST00000433619 RAB4AP20338 218 aa12.76□□□□□ -0.37
FAM3A-211ENST00000433619 FUSP35637 526 aaKnown RBP eCLIP12.76□□□□□ -0.37
FAM3A-211ENST00000433619 RBX1P62877 108 aa12.76□□□□□ -0.37
FAM3A-211ENST00000433619 IFITM2Q01629 132 aa12.76□□□□□ -0.37
FAM3A-211ENST00000433619 GAGE6Q13070 117 aa12.76□□□□□ -0.37
FAM3A-211ENST00000433619 COTL1Q14019 142 aa12.76□□□□□ -0.37
FAM3A-211ENST00000433619 Q8N976 141 aa12.76□□□□□ -0.37
FAM3A-211ENST00000433619 RNF185Q96GF1 192 aa12.76□□□□□ -0.37
FAM3A-211ENST00000433619 TMEM243Q9BU79 118 aa12.76□□□□□ -0.37
FAM3A-211ENST00000433619 TRBV6-5A0A0K0K1A5 114 aa12.75□□□□□ -0.37
FAM3A-211ENST00000433619 ANGP03950 147 aaKnown RBP12.75□□□□□ -0.37
FAM3A-211ENST00000433619 Q8N814 137 aa12.75□□□□□ -0.37
FAM3A-211ENST00000433619 KIAA1109Q2LD37 5005 aa12.75□□□□□ -0.37
FAM3A-211ENST00000433619 IGKV2D-24A0A075B6R9 120 aa12.74□□□□□ -0.37
FAM3A-211ENST00000433619 A0A1B0GUV1 79 aa12.74□□□□□ -0.37
FAM3A-211ENST00000433619 PRR34Q9NV39 138 aa12.74□□□□□ -0.37
FAM3A-211ENST00000433619 NCR2O95944 276 aa12.73□□□□□ -0.37
FAM3A-211ENST00000433619 DEFB104AQ8WTQ1 72 aa12.73□□□□□ -0.37
FAM3A-211ENST00000433619 NTN5Q8WTR8 489 aaPredicted RBP12.73□□□□□ -0.37
FAM3A-211ENST00000433619 MRAP2Q96G30 205 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms