RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TRAV26-2A0A0B4J265 109 aa10.62□□□□□ -0.71
TREX1-201ENST00000433541 SMIM27A0A1W2PRY6 76 aa10.62□□□□□ -0.71
TREX1-201ENST00000433541 LINC00694P0DN24 101 aa10.62□□□□□ -0.71
TREX1-201ENST00000433541 LINC00315P59091 139 aa10.62□□□□□ -0.71
TREX1-201ENST00000433541 UBE2D3P61077 147 aa10.62□□□□□ -0.71
TREX1-201ENST00000433541 UBE2D2P62837 147 aa10.62□□□□□ -0.71
TREX1-201ENST00000433541 Q6ZR54 194 aa10.62□□□□□ -0.71
TREX1-201ENST00000433541 M0QY20 66 aa10.61□□□□□ -0.71
TREX1-201ENST00000433541 CAMPP49913 170 aa10.61□□□□□ -0.71
TREX1-201ENST00000433541 ANAPC16Q96DE5 110 aa10.61□□□□□ -0.71
TREX1-201ENST00000433541 DNAJC30Q96LL9 226 aa10.61□□□□□ -0.71
TREX1-201ENST00000433541 URGCP-MRPS24S4R325 110 aa10.61□□□□□ -0.71
TREX1-201ENST00000433541 DNAH6Q9C0G6 4158 aa10.61□□□□□ -0.71
TREX1-201ENST00000433541 LINC00862A6NCI5 91 aa10.6□□□□□ -0.71
TREX1-201ENST00000433541 IGHV3-30P01768 117 aa10.6□□□□□ -0.71
TREX1-201ENST00000433541 IGHV3-33P01772 117 aa10.6□□□□□ -0.71
TREX1-201ENST00000433541 IGHV3-30-3P0DP02 117 aa10.6□□□□□ -0.71
TREX1-201ENST00000433541 IGHV3-30-5P0DP03 117 aa10.6□□□□□ -0.71
TREX1-201ENST00000433541 MRPL54Q6P161 138 aaKnown RBP10.6□□□□□ -0.71
TREX1-201ENST00000433541 KCNIP4Q6PIL6 250 aa10.6□□□□□ -0.71
TREX1-201ENST00000433541 C6orf223Q8N319 242 aa10.6□□□□□ -0.71
TREX1-201ENST00000433541 NIT2Q9NQR4 276 aa10.6□□□□□ -0.71
TREX1-201ENST00000433541 ADCYAP1P18509 176 aa10.59□□□□□ -0.71
TREX1-201ENST00000433541 DAZ4Q86SG3 579 aaKnown RBP10.59□□□□□ -0.71
TREX1-201ENST00000433541 SEC11CQ9BY50 192 aa10.59□□□□□ -0.71
TREX1-201ENST00000433541 TMEM191AQ9H0A3 160 aa10.59□□□□□ -0.71
TREX1-201ENST00000433541 DAZ3Q9NR90 486 aaKnown RBP10.59□□□□□ -0.71
TREX1-201ENST00000433541 S100A8P05109 93 aa10.58□□□□□ -0.72
TREX1-201ENST00000433541 DNAH10OSP0CZ25 163 aa10.58□□□□□ -0.72
TREX1-201ENST00000433541 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
TREX1-201ENST00000433541 GATD1Q8NB37 220 aa10.58□□□□□ -0.72
TREX1-201ENST00000433541 KRTAP1-5Q9BYS1 174 aa10.58□□□□□ -0.72
TREX1-201ENST00000433541 A0A1B0GW15 77 aa10.57□□□□□ -0.72
TREX1-201ENST00000433541 HBBP68871 147 aa10.57□□□□□ -0.72
TREX1-201ENST00000433541 TMEM97Q5BJF2 176 aa10.57□□□□□ -0.72
TREX1-201ENST00000433541 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
TREX1-201ENST00000433541 AMN1Q8IY45 258 aa10.57□□□□□ -0.72
TREX1-201ENST00000433541 CHCHD5Q9BSY4 110 aa10.57□□□□□ -0.72
TREX1-201ENST00000433541 A0A087WX48 190 aa10.56□□□□□ -0.72
TREX1-201ENST00000433541 TRBV6-8A0A0A6YYG3 113 aa10.56□□□□□ -0.72
TREX1-201ENST00000433541 TMEM262E9PQX1 116 aa10.56□□□□□ -0.72
TREX1-201ENST00000433541 LINC01556Q5JQF7 62 aa10.56□□□□□ -0.72
TREX1-201ENST00000433541 RPL39LQ96EH5 51 aaKnown RBP10.56□□□□□ -0.72
TREX1-201ENST00000433541 TRBV25-1A0A075B6N4 114 aa10.55□□□□□ -0.72
TREX1-201ENST00000433541 PRSS29PA6NIE9 313 aa10.55□□□□□ -0.72
TREX1-201ENST00000433541 K7EP13 123 aa10.55□□□□□ -0.72
TREX1-201ENST00000433541 DEFB104AQ8WTQ1 72 aa10.55□□□□□ -0.72
TREX1-201ENST00000433541 MRAP2Q96G30 205 aa10.55□□□□□ -0.72
TREX1-201ENST00000433541 RTL8CO15255 209 aa10.54□□□□□ -0.72
TREX1-201ENST00000433541 RAB4AP20338 218 aa10.54□□□□□ -0.72
TREX1-201ENST00000433541 COTL1Q14019 142 aa10.54□□□□□ -0.72
TREX1-201ENST00000433541 NDUFA5Q16718 116 aa10.54□□□□□ -0.72
TREX1-201ENST00000433541 FRZBQ92765 325 aa10.54□□□□□ -0.72
TREX1-201ENST00000433541 Q9HAA7 133 aa10.54□□□□□ -0.72
TREX1-201ENST00000433541 IGHV1-24A0A0C4DH33 117 aa10.53□□□□□ -0.72
TREX1-201ENST00000433541 NCR2O95944 276 aa10.53□□□□□ -0.72
TREX1-201ENST00000433541 NFE4Q86UQ8 179 aa10.53□□□□□ -0.72
TREX1-201ENST00000433541 ST20Q9HBF5 79 aa10.53□□□□□ -0.72
TREX1-201ENST00000433541 SMKR1H3BMG3 65 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 UBE2L6O14933 153 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 PMCHP20382 165 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 S100PP25815 95 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 AMTP48728 403 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 PKIAP61925 76 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 ATP5L2Q7Z4Y8 100 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 NIT1Q86X76 327 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 Q8N3U1 123 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 RNF185Q96GF1 192 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 CTDSP1Q9GZU7 261 aa10.52□□□□□ -0.73
TREX1-201ENST00000433541 SDHAF1A6NFY7 115 aa10.51□□□□□ -0.73
TREX1-201ENST00000433541 PSCAO43653 123 aa10.51□□□□□ -0.73
TREX1-201ENST00000433541 APOC3P02656 99 aa10.51□□□□□ -0.73
TREX1-201ENST00000433541 CKS2P33552 79 aa10.51□□□□□ -0.73
TREX1-201ENST00000433541 FAM104BQ5XKR9 115 aa10.51□□□□□ -0.73
TREX1-201ENST00000433541 BTF3L4Q96K17 158 aa10.51□□□□□ -0.73
TREX1-201ENST00000433541 TMEM243Q9BU79 118 aa10.51□□□□□ -0.73
TREX1-201ENST00000433541 RPS10P5Q9NQ39 176 aa10.51□□□□□ -0.73
TREX1-201ENST00000433541 PPP1R17O96001 155 aa10.5□□□□□ -0.73
TREX1-201ENST00000433541 BTF3P20290 206 aaKnown RBP10.5□□□□□ -0.73
TREX1-201ENST00000433541 GAGE6Q13070 117 aa10.5□□□□□ -0.73
TREX1-201ENST00000433541 ELOBQ15370 118 aa10.5□□□□□ -0.73
TREX1-201ENST00000433541 MRPL51Q4U2R6 128 aaKnown RBP10.5□□□□□ -0.73
TREX1-201ENST00000433541 NTM-AS1Q6ZSK4 140 aa10.5□□□□□ -0.73
TREX1-201ENST00000433541 CARHSP1Q9Y2V2 147 aaKnown RBP10.5□□□□□ -0.73
TREX1-201ENST00000433541 A0A1B0GXF2 115 aa10.49□□□□□ -0.73
TREX1-201ENST00000433541 GAS8-AS1O95177 125 aa10.49□□□□□ -0.73
TREX1-201ENST00000433541 APCSP02743 223 aa10.49□□□□□ -0.73
TREX1-201ENST00000433541 ANGP03950 147 aaKnown RBP10.49□□□□□ -0.73
TREX1-201ENST00000433541 RPS10P46783 165 aaKnown RBP10.49□□□□□ -0.73
TREX1-201ENST00000433541 RHEBQ15382 184 aa10.49□□□□□ -0.73
TREX1-201ENST00000433541 CLRN3Q8NCR9 226 aa10.49□□□□□ -0.73
TREX1-201ENST00000433541 CHCHD7Q9BUK0 85 aa10.49□□□□□ -0.73
TREX1-201ENST00000433541 KLK12Q9UKR0 248 aa10.49□□□□□ -0.73
TREX1-201ENST00000433541 C7orf77A4D0Y5 90 aa10.48□□□□□ -0.73
TREX1-201ENST00000433541 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
TREX1-201ENST00000433541 I3L3M4 83 aa10.48□□□□□ -0.73
TREX1-201ENST00000433541 CRPP02741 224 aa10.48□□□□□ -0.73
TREX1-201ENST00000433541 TNP2Q05952 138 aa10.48□□□□□ -0.73
TREX1-201ENST00000433541 IQCJQ1A5X6 159 aa10.48□□□□□ -0.73
TREX1-201ENST00000433541 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms