RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 NEGR1Q7Z3B1 354 aa10.66□□□□□ -0.7
CNOT9-205ENST00000433439 GATD1Q8NB37 220 aa10.66□□□□□ -0.7
CNOT9-205ENST00000433439 NEXN-AS1Q8NBZ9 246 aa10.66□□□□□ -0.7
CNOT9-205ENST00000433439 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.7
CNOT9-205ENST00000433439 NCR2O95944 276 aa10.65□□□□□ -0.7
CNOT9-205ENST00000433439 ELOBQ15370 118 aa10.65□□□□□ -0.7
CNOT9-205ENST00000433439 MRPL51Q4U2R6 128 aaKnown RBP10.65□□□□□ -0.7
CNOT9-205ENST00000433439 UBE2DNLQ8IWF7 75 aa10.65□□□□□ -0.7
CNOT9-205ENST00000433439 RPL39LQ96EH5 51 aaKnown RBP10.65□□□□□ -0.7
CNOT9-205ENST00000433439 SMCO4Q9NRQ5 59 aa10.65□□□□□ -0.7
CNOT9-205ENST00000433439 TNFRSF18Q9Y5U5 241 aa10.65□□□□□ -0.7
CNOT9-205ENST00000433439 TRBV7-3A0A075B6L6 115 aa10.64□□□□□ -0.71
CNOT9-205ENST00000433439 GAS8-AS1O95177 125 aa10.64□□□□□ -0.71
CNOT9-205ENST00000433439 ATP6V0E2Q8NHE4 81 aa10.64□□□□□ -0.71
CNOT9-205ENST00000433439 IGHV3-38A0A0C4DH36 116 aa10.63□□□□□ -0.71
CNOT9-205ENST00000433439 SCO1O75880 301 aa10.63□□□□□ -0.71
CNOT9-205ENST00000433439 OR10J3Q5JRS4 329 aa10.63□□□□□ -0.71
CNOT9-205ENST00000433439 TMEM136Q6ZRR5 245 aa10.63□□□□□ -0.71
CNOT9-205ENST00000433439 MRAP2Q96G30 205 aa10.63□□□□□ -0.71
CNOT9-205ENST00000433439 NIT2Q9NQR4 276 aa10.63□□□□□ -0.71
CNOT9-205ENST00000433439 LY6G6CO95867 125 aa10.62□□□□□ -0.71
CNOT9-205ENST00000433439 S100A1P23297 94 aa10.62□□□□□ -0.71
CNOT9-205ENST00000433439 CKS2P33552 79 aa10.62□□□□□ -0.71
CNOT9-205ENST00000433439 CCL18P55774 89 aa10.62□□□□□ -0.71
CNOT9-205ENST00000433439 ESRGQ1W209 222 aa10.62□□□□□ -0.71
CNOT9-205ENST00000433439 DEFB104AQ8WTQ1 72 aa10.62□□□□□ -0.71
CNOT9-205ENST00000433439 DNAJC30Q96LL9 226 aa10.62□□□□□ -0.71
CNOT9-205ENST00000433439 D6R8Y8 96 aa10.61□□□□□ -0.71
CNOT9-205ENST00000433439 RPS10P46783 165 aaKnown RBP10.61□□□□□ -0.71
CNOT9-205ENST00000433439 UBE2D3P61077 147 aa10.61□□□□□ -0.71
CNOT9-205ENST00000433439 UBE2D2P62837 147 aa10.61□□□□□ -0.71
CNOT9-205ENST00000433439 LYPD5Q6UWN5 251 aa10.61□□□□□ -0.71
CNOT9-205ENST00000433439 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
CNOT9-205ENST00000433439 FRZBQ92765 325 aa10.61□□□□□ -0.71
CNOT9-205ENST00000433439 TRBV24-1A0A075B6N3 115 aa10.6□□□□□ -0.71
CNOT9-205ENST00000433439 HLA-DQA1P01909 254 aa10.6□□□□□ -0.71
CNOT9-205ENST00000433439 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
CNOT9-205ENST00000433439 KIAA1644Q3SXP7 199 aa10.6□□□□□ -0.71
CNOT9-205ENST00000433439 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.6□□□□□ -0.71
CNOT9-205ENST00000433439 APCSP02743 223 aa10.59□□□□□ -0.71
CNOT9-205ENST00000433439 COX19Q49B96 90 aa10.59□□□□□ -0.71
CNOT9-205ENST00000433439 GNB1LQ9BYB4 327 aa10.59□□□□□ -0.71
CNOT9-205ENST00000433439 GTSF1LQ9H1H1 148 aa10.59□□□□□ -0.71
CNOT9-205ENST00000433439 ST20Q9HBF5 79 aa10.59□□□□□ -0.71
CNOT9-205ENST00000433439 LINC00588Q9Y4M8 146 aa10.59□□□□□ -0.71
CNOT9-205ENST00000433439 DNAH7Q8WXX0 4024 aa10.58□□□□□ -0.72
CNOT9-205ENST00000433439 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
CNOT9-205ENST00000433439 ORMDL3Q8N138 153 aa10.58□□□□□ -0.72
CNOT9-205ENST00000433439 PRELID3AQ96N28 172 aa10.58□□□□□ -0.72
CNOT9-205ENST00000433439 YPEL4Q96NS1 127 aa10.58□□□□□ -0.72
CNOT9-205ENST00000433439 MRPL18Q9H0U6 180 aaKnown RBP10.58□□□□□ -0.72
CNOT9-205ENST00000433439 TRAPPC1Q9Y5R8 145 aa10.58□□□□□ -0.72
CNOT9-205ENST00000433439 SDHAF1A6NFY7 115 aa10.57□□□□□ -0.72
CNOT9-205ENST00000433439 TNFRSF6BO95407 300 aa10.57□□□□□ -0.72
CNOT9-205ENST00000433439 NPYP01303 97 aa10.57□□□□□ -0.72
CNOT9-205ENST00000433439 PPBPP02775 128 aa10.57□□□□□ -0.72
CNOT9-205ENST00000433439 LGALS9CQ6DKI2 356 aa10.57□□□□□ -0.72
CNOT9-205ENST00000433439 NRACQ8N912 160 aa10.57□□□□□ -0.72
CNOT9-205ENST00000433439 LINC00476Q8WZB0 136 aa10.57□□□□□ -0.72
CNOT9-205ENST00000433439 STARD9Q9P2P6 4700 aa10.56□□□□□ -0.72
CNOT9-205ENST00000433439 PPP1R17O96001 155 aa10.56□□□□□ -0.72
CNOT9-205ENST00000433439 MT-ND6P03923 174 aa10.56□□□□□ -0.72
CNOT9-205ENST00000433439 PMCHP20382 165 aa10.56□□□□□ -0.72
CNOT9-205ENST00000433439 DAZ4Q86SG3 579 aaKnown RBP10.56□□□□□ -0.72
CNOT9-205ENST00000433439 DAZ3Q9NR90 486 aaKnown RBP10.56□□□□□ -0.72
CNOT9-205ENST00000433439 RYR2Q92736 4967 aa10.56□□□□□ -0.72
CNOT9-205ENST00000433439 TRBV6-5A0A0K0K1A5 114 aa10.55□□□□□ -0.72
CNOT9-205ENST00000433439 SUMO2P61956 95 aaKnown RBP10.55□□□□□ -0.72
CNOT9-205ENST00000433439 TMEM70Q9BUB7 260 aa10.55□□□□□ -0.72
CNOT9-205ENST00000433439 MRPS16Q9Y3D3 137 aaKnown RBP10.55□□□□□ -0.72
CNOT9-205ENST00000433439 TRAV8-6A0A0B4J262 113 aa10.54□□□□□ -0.72
CNOT9-205ENST00000433439 LOC389332A0A1B0GUA5 103 aa10.54□□□□□ -0.72
CNOT9-205ENST00000433439 COTL1Q14019 142 aa10.54□□□□□ -0.72
CNOT9-205ENST00000433439 LELP1Q5T871 98 aa10.54□□□□□ -0.72
CNOT9-205ENST00000433439 IGLV2-18A0A075B6J9 118 aa10.53□□□□□ -0.72
CNOT9-205ENST00000433439 TIRAPP58753 221 aa10.53□□□□□ -0.72
CNOT9-205ENST00000433439 WFDC10BQ8IUB3 73 aa10.53□□□□□ -0.72
CNOT9-205ENST00000433439 CSMD3Q7Z407 3707 aa10.53□□□□□ -0.72
CNOT9-205ENST00000433439 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.73
CNOT9-205ENST00000433439 LCE6AA0A183 80 aa10.52□□□□□ -0.73
CNOT9-205ENST00000433439 I3L3M4 83 aa10.52□□□□□ -0.73
CNOT9-205ENST00000433439 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.73
CNOT9-205ENST00000433439 TMEM97Q5BJF2 176 aa10.52□□□□□ -0.73
CNOT9-205ENST00000433439 NTM-AS1Q6ZSK4 140 aa10.52□□□□□ -0.73
CNOT9-205ENST00000433439 C20orf78Q9BR46 151 aa10.52□□□□□ -0.73
CNOT9-205ENST00000433439 MAP1LC3AQ9H492 121 aa10.52□□□□□ -0.73
CNOT9-205ENST00000433439 TENM2Q9NT68 2774 aa10.51□□□□□ -0.73
CNOT9-205ENST00000433439 COLCA2A8K830 154 aa10.51□□□□□ -0.73
CNOT9-205ENST00000433439 VCYO14598 125 aa10.51□□□□□ -0.73
CNOT9-205ENST00000433439 PHOX2AO14813 284 aa10.51□□□□□ -0.73
CNOT9-205ENST00000433439 FCER1GP30273 86 aa10.51□□□□□ -0.73
CNOT9-205ENST00000433439 AMTP48728 403 aa10.51□□□□□ -0.73
CNOT9-205ENST00000433439 CHCHD5Q9BSY4 110 aa10.51□□□□□ -0.73
CNOT9-205ENST00000433439 SMIM2Q9BVW6 85 aa10.51□□□□□ -0.73
CNOT9-205ENST00000433439 Q9H8V8 135 aa10.51□□□□□ -0.73
CNOT9-205ENST00000433439 TRBV25-1A0A075B6N4 114 aa10.5□□□□□ -0.73
CNOT9-205ENST00000433439 IGHV1-24A0A0C4DH33 117 aa10.5□□□□□ -0.73
CNOT9-205ENST00000433439 TMEM262E9PQX1 116 aa10.5□□□□□ -0.73
CNOT9-205ENST00000433439 SIVA1O15304 175 aa10.5□□□□□ -0.73
CNOT9-205ENST00000433439 RAB5AP20339 215 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms