RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SMIM12Q96EX1 92 aa3.93□□□□□ -1.78
HMGB3P24-201ENST00000433260 SMIM7Q9BQ49 75 aa3.93□□□□□ -1.78
HMGB3P24-201ENST00000433260 GTSF1LQ9H1H1 148 aa3.93□□□□□ -1.78
HMGB3P24-201ENST00000433260 RPP21Q9H633 154 aaKnown RBP3.93□□□□□ -1.78
HMGB3P24-201ENST00000433260 LY96Q9Y6Y9 160 aa3.93□□□□□ -1.78
HMGB3P24-201ENST00000433260 PLECQ15149 4684 aaKnown RBP3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 TRAV9-2A0A087WT02 112 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 IGHV3-38A0A0C4DH36 116 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 TNFRSF6BO95407 300 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 CXCL1P09341 107 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 EVI2AP22794 236 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 CACNG7P62955 275 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 TMEM241Q24JQ0 296 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 DEFB104AQ8WTQ1 72 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 GTSF1Q8WW33 167 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 PGLYRP4Q96LB8 373 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 KIF25-AS1Q9Y6Z4 181 aa3.92□□□□□ -1.78
HMGB3P24-201ENST00000433260 TRBV7-3A0A075B6L6 115 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 A0A1W2PPQ1 181 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 F2Z2F3 143 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 H0Y8G0 127 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 FOXA3P55318 350 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 LINC00315P59091 139 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 RAB14P61106 215 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 RPL23P62829 140 aaKnown RBP3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 RPL36AP83881 106 aaKnown RBP3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 ADIRFQ15847 76 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 TTC32Q5I0X7 151 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 LELP1Q5T871 98 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 FAM231DQ6ZW35 169 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 LINC01551Q86U37 167 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 RPL36ALQ969Q0 106 aaKnown RBP3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 LYSTQ99698 3801 aa3.91□□□□□ -1.78
HMGB3P24-201ENST00000433260 A0A1B0GVY2 172 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 A4D1N5 150 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 A8MWL6 223 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 TMEM262E9PQX1 116 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 TRGC1P0CF51 173 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 FUSP35637 526 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 UBE2D3P61077 147 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 UBE2D2P62837 147 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 FAM74A3Q4VXF1 159 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 SUMO4Q6EEV6 95 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 C15orf54Q8N8G6 183 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 NEXN-AS1Q8NBZ9 246 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 OR10G8Q8NGN5 311 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 AP1S3Q96PC3 154 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 Q9HAA7 133 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 NAT8Q9UHE5 227 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 ALMS1Q8TCU4 4167 aa3.9□□□□□ -1.79
HMGB3P24-201ENST00000433260 TRAV26-2A0A0B4J265 109 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 TRBV10-1A0A0K0K1A3 114 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 HSBP1L1C9JCN9 74 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 M0QY20 66 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 LINC00694P0DN24 101 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 TIRAPP58753 221 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 IFITM2Q01629 132 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 DAZ4Q86SG3 579 aaKnown RBP3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 ISOC2Q96AB3 205 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 BORCS7Q96B45 105 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 KRTAP3-1Q9BYR8 98 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 DPH3P1Q9H4G8 78 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 DAZ3Q9NR90 486 aaKnown RBP3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 OSTCQ9NRP0 149 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 URGCP-MRPS24S4R325 110 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 V9GYV3 84 aa3.89□□□□□ -1.79
HMGB3P24-201ENST00000433260 A0A087WWC5 75 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 HIGD1CA8MV81 97 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 IBA57-AS1B1ANH7 110 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 H7C1H1 209 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 PSCAO43653 123 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 NDUFS6O75380 124 aaKnown RBP3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 CTRLP40313 264 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 GAGE6Q13070 117 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 LINC01556Q5JQF7 62 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 KCNIP4Q6PIL6 250 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 RASL11AQ6T310 242 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 NTM-AS1Q6ZSK4 140 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 SMIM15Q7Z3B0 74 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 SPATA12Q7Z6I5 190 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 NFE4Q86UQ8 179 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 GATD1Q8NB37 220 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 TSKUQ8WUA8 353 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 RPL39LQ96EH5 51 aaKnown RBP3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 DNAJC30Q96LL9 226 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 CHCHD5Q9BSY4 110 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 SMDT1Q9H4I9 107 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 NIT2Q9NQR4 276 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 KLK12Q9UKR0 248 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
HMGB3P24-201ENST00000433260 DNAH1Q9P2D7 4330 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 A0A087WX48 190 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 TRBV6-8A0A0A6YYG3 113 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 A0A1B0GUT8 65 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 TRIAP1O43715 76 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 GAS8-AS1O95177 125 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 CAMPP49913 170 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms