RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 LINC00269Q8N2A0 174 aa8.72□□□□□ -1.01
SEC16A-206ENST00000431893 SNURFQ9Y675 71 aa8.72□□□□□ -1.01
SEC16A-206ENST00000431893 HRCT1Q6UXD1 115 aa8.72□□□□□ -1.01
SEC16A-206ENST00000431893 THSD7BQ9C0I4 1608 aa8.72□□□□□ -1.01
SEC16A-206ENST00000431893 IGLV2-14P01704 120 aa8.72□□□□□ -1.01
SEC16A-206ENST00000431893 MIAQ16674 131 aa8.72□□□□□ -1.01
SEC16A-206ENST00000431893 SLX1AQ9BQ83 275 aa8.72□□□□□ -1.01
SEC16A-206ENST00000431893 OBSL1O75147 1896 aa8.71□□□□□ -1.01
SEC16A-206ENST00000431893 NLRC5Q86WI3 1866 aa8.71□□□□□ -1.01
SEC16A-206ENST00000431893 ZNF80P51504 273 aaPredicted RBP8.71□□□□□ -1.01
SEC16A-206ENST00000431893 C3orf22Q8N5N4 141 aa8.71□□□□□ -1.01
SEC16A-206ENST00000431893 PRR4Q16378 134 aa8.71□□□□□ -1.02
SEC16A-206ENST00000431893 B9D2Q9BPU9 175 aa8.71□□□□□ -1.02
SEC16A-206ENST00000431893 A0A0J9YXY3 114 aa8.71□□□□□ -1.02
SEC16A-206ENST00000431893 FAM236DA0A1B0GTK5 79 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 FAM236CP0DP71 79 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 PIK3CD-AS1Q5SR53 167 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 LINC00322Q6ZN03 302 aaPredicted RBP8.7□□□□□ -1.02
SEC16A-206ENST00000431893 SPTBN1Q01082 2364 aaKnown RBP8.7□□□□□ -1.02
SEC16A-206ENST00000431893 CTRLP40313 264 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 GDF5OSQ5U4N7 250 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 IGHV4-30-4P0DP06 118 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 IGHV4-31P0DP07 118 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 MRPL55Q7Z7F7 128 aaKnown RBP8.7□□□□□ -1.02
SEC16A-206ENST00000431893 ODF3L1Q8IXM7 274 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 NCOR1O75376 2440 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 ZNF407Q9C0G0 2248 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 DOPEY2Q9Y3R5 2298 aa8.7□□□□□ -1.02
SEC16A-206ENST00000431893 ZDBF2Q9HCK1 2354 aa8.69□□□□□ -1.02
SEC16A-206ENST00000431893 H3BT86 120 aa8.69□□□□□ -1.02
SEC16A-206ENST00000431893 MGAMO43451 1857 aa8.69□□□□□ -1.02
SEC16A-206ENST00000431893 TRBV6-1A0A0K0K1D8 114 aa8.69□□□□□ -1.02
SEC16A-206ENST00000431893 C3orf84H3BNL1 204 aa8.69□□□□□ -1.02
SEC16A-206ENST00000431893 FAM19A1Q7Z5A9 133 aa8.69□□□□□ -1.02
SEC16A-206ENST00000431893 Q8N7P7 452 aa8.69□□□□□ -1.02
SEC16A-206ENST00000431893 LINC00467Q9BRT7 94 aa8.69□□□□□ -1.02
SEC16A-206ENST00000431893 USP17L23D6RBM5 183 aa8.68□□□□□ -1.02
SEC16A-206ENST00000431893 IGKV1D-37A0A075B6S9 117 aa8.68□□□□□ -1.02
SEC16A-206ENST00000431893 FAM19A5Q7Z5A7 132 aaPredicted RBP8.68□□□□□ -1.02
SEC16A-206ENST00000431893 USF3Q68DE3 2245 aa8.68□□□□□ -1.02
SEC16A-206ENST00000431893 LINC00643Q86TS7 51 aa8.68□□□□□ -1.02
SEC16A-206ENST00000431893 IGF1P05019 195 aa8.67□□□□□ -1.02
SEC16A-206ENST00000431893 Q6ZTI0 123 aa8.67□□□□□ -1.02
SEC16A-206ENST00000431893 GTF3C1Q12789 2109 aa8.67□□□□□ -1.02
SEC16A-206ENST00000431893 C4orf3Q8WVX3 66 aa8.67□□□□□ -1.02
SEC16A-206ENST00000431893 COL6A6A6NMZ7 2263 aa8.67□□□□□ -1.02
SEC16A-206ENST00000431893 ZFAND2AQ8N6M9 145 aa8.67□□□□□ -1.02
SEC16A-206ENST00000431893 C20orf203Q8NBC4 194 aa8.67□□□□□ -1.02
SEC16A-206ENST00000431893 LINC01548A6NM66 108 aa8.67□□□□□ -1.02
SEC16A-206ENST00000431893 A8MZ25 164 aa8.67□□□□□ -1.02
SEC16A-206ENST00000431893 MAP6D1Q9H9H5 199 aa8.66□□□□□ -1.02
SEC16A-206ENST00000431893 H3BQ85 93 aa8.66□□□□□ -1.02
SEC16A-206ENST00000431893 DENND4AQ7Z401 1863 aa8.66□□□□□ -1.02
SEC16A-206ENST00000431893 GPHB5Q86YW7 130 aa8.66□□□□□ -1.02
SEC16A-206ENST00000431893 SPANXB1Q9NS25 103 aaPredicted RBP8.66□□□□□ -1.02
SEC16A-206ENST00000431893 CXCL5P42830 114 aa8.66□□□□□ -1.02
SEC16A-206ENST00000431893 PROK1P58294 105 aa8.66□□□□□ -1.02
SEC16A-206ENST00000431893 REG3AQ06141 175 aa8.66□□□□□ -1.02
SEC16A-206ENST00000431893 MAPKAPK5-AS1Q8N8E1 139 aa8.66□□□□□ -1.02
SEC16A-206ENST00000431893 TRIOBPQ9H2D6 2365 aa8.66□□□□□ -1.02
SEC16A-206ENST00000431893 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.65□□□□□ -1.02
SEC16A-206ENST00000431893 KRTAP27-1Q3LI81 207 aa8.65□□□□□ -1.02
SEC16A-206ENST00000431893 PPDPFQ9H3Y8 114 aa8.65□□□□□ -1.02
SEC16A-206ENST00000431893 A0A087WZ39 114 aa8.65□□□□□ -1.02
SEC16A-206ENST00000431893 C19orf71A6NCJ1 209 aa8.65□□□□□ -1.02
SEC16A-206ENST00000431893 NDUFC2-KCTD14E9PQ53 114 aa8.65□□□□□ -1.03
SEC16A-206ENST00000431893 C1orf158Q8N1D5 194 aa8.65□□□□□ -1.03
SEC16A-206ENST00000431893 C20orf173Q96LM9 149 aa8.65□□□□□ -1.03
SEC16A-206ENST00000431893 XAGE1AQ9HD64 81 aa8.65□□□□□ -1.03
SEC16A-206ENST00000431893 DSCAML1Q8TD84 2053 aa8.64□□□□□ -1.03
SEC16A-206ENST00000431893 ADORA2A-AS1P86434 159 aa8.64□□□□□ -1.03
SEC16A-206ENST00000431893 TRIAP1O43715 76 aa8.64□□□□□ -1.03
SEC16A-206ENST00000431893 WISP2O76076 250 aa8.64□□□□□ -1.03
SEC16A-206ENST00000431893 PLA2G2CQ5R387 149 aa8.64□□□□□ -1.03
SEC16A-206ENST00000431893 LINC00526Q96FQ7 95 aa8.64□□□□□ -1.03
SEC16A-206ENST00000431893 DENND4CQ5VZ89 1909 aa8.64□□□□□ -1.03
SEC16A-206ENST00000431893 C22orf34Q6ZV56 151 aa8.63□□□□□ -1.03
SEC16A-206ENST00000431893 CHCHD10Q8WYQ3 142 aaPredicted RBP8.63□□□□□ -1.03
SEC16A-206ENST00000431893 A0A0J9YX75 114 aa8.63□□□□□ -1.03
SEC16A-206ENST00000431893 POM121L12Q8N7R1 296 aa8.63□□□□□ -1.03
SEC16A-206ENST00000431893 SPINK6Q6UWN8 80 aa8.63□□□□□ -1.03
SEC16A-206ENST00000431893 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
SEC16A-206ENST00000431893 FAM240AA0A1B0GVK7 77 aa8.63□□□□□ -1.03
SEC16A-206ENST00000431893 IGKV2-28A0A075B6P5 120 aa8.63□□□□□ -1.03
SEC16A-206ENST00000431893 IGKV2D-28P01615 120 aa8.63□□□□□ -1.03
SEC16A-206ENST00000431893 SPTA1P02549 2419 aa8.63□□□□□ -1.03
SEC16A-206ENST00000431893 MRPS12O15235 138 aaKnown RBP8.62□□□□□ -1.03
SEC16A-206ENST00000431893 CDKN2A-AS1Q9UH64 79 aa8.62□□□□□ -1.03
SEC16A-206ENST00000431893 WFDC13Q8IUB5 93 aa8.62□□□□□ -1.03
SEC16A-206ENST00000431893 CCDC140Q96MF4 163 aa8.62□□□□□ -1.03
SEC16A-206ENST00000431893 UQCRQO14949 82 aa8.62□□□□□ -1.03
SEC16A-206ENST00000431893 TRBV10-1A0A0K0K1A3 114 aa8.62□□□□□ -1.03
SEC16A-206ENST00000431893 KIF26AQ9ULI4 1882 aaPredicted RBP8.62□□□□□ -1.03
SEC16A-206ENST00000431893 CCDC179H3BU77 68 aa8.62□□□□□ -1.03
SEC16A-206ENST00000431893 PKDREJQ9NTG1 2253 aa8.62□□□□□ -1.03
SEC16A-206ENST00000431893 ZFAND3Q9H8U3 227 aa8.61□□□□□ -1.03
SEC16A-206ENST00000431893 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
SEC16A-206ENST00000431893 IGLV2-8P01709 118 aa8.61□□□□□ -1.03
SEC16A-206ENST00000431893 MED14OSP0DP75 135 aa8.61□□□□□ -1.03
SEC16A-206ENST00000431893 PRO0255Q9UI72 69 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms