RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 UBE2D3P61077 147 aa9.88□□□□□ -0.83
CSTF3-202ENST00000431742 UBE2D2P62837 147 aa9.88□□□□□ -0.83
CSTF3-202ENST00000431742 ATP6V0E2Q8NHE4 81 aa9.88□□□□□ -0.83
CSTF3-202ENST00000431742 CTDSP1Q9GZU7 261 aa9.88□□□□□ -0.83
CSTF3-202ENST00000431742 DNAH10Q8IVF4 4471 aa9.88□□□□□ -0.83
CSTF3-202ENST00000431742 RPL36AP83881 106 aaKnown RBP9.87□□□□□ -0.83
CSTF3-202ENST00000431742 RHEBQ15382 184 aa9.87□□□□□ -0.83
CSTF3-202ENST00000431742 ATP5L2Q7Z4Y8 100 aa9.87□□□□□ -0.83
CSTF3-202ENST00000431742 GATD1Q8NB37 220 aa9.87□□□□□ -0.83
CSTF3-202ENST00000431742 CLRN3Q8NCR9 226 aa9.87□□□□□ -0.83
CSTF3-202ENST00000431742 RPL36ALQ969Q0 106 aaKnown RBP9.87□□□□□ -0.83
CSTF3-202ENST00000431742 IMMP2LQ96T52 175 aa9.87□□□□□ -0.83
CSTF3-202ENST00000431742 GTSF1LQ9H1H1 148 aa9.87□□□□□ -0.83
CSTF3-202ENST00000431742 A0A087WWC5 75 aa9.86□□□□□ -0.83
CSTF3-202ENST00000431742 C7orf77A4D0Y5 90 aa9.86□□□□□ -0.83
CSTF3-202ENST00000431742 MRPL54Q6P161 138 aaKnown RBP9.86□□□□□ -0.83
CSTF3-202ENST00000431742 RASL11AQ6T310 242 aa9.86□□□□□ -0.83
CSTF3-202ENST00000431742 FRZBQ92765 325 aa9.86□□□□□ -0.83
CSTF3-202ENST00000431742 RNF185Q96GF1 192 aa9.86□□□□□ -0.83
CSTF3-202ENST00000431742 DNAJC30Q96LL9 226 aa9.86□□□□□ -0.83
CSTF3-202ENST00000431742 TMEM242Q9NWH2 141 aa9.86□□□□□ -0.83
CSTF3-202ENST00000431742 FRAS1Q86XX4 4008 aa9.86□□□□□ -0.83
CSTF3-202ENST00000431742 TRAV26-2A0A0B4J265 109 aa9.85□□□□□ -0.83
CSTF3-202ENST00000431742 HBBP68871 147 aa9.85□□□□□ -0.83
CSTF3-202ENST00000431742 SLC7A5P1Q8MH63 180 aa9.85□□□□□ -0.83
CSTF3-202ENST00000431742 APOC3P02656 99 aa9.84□□□□□ -0.83
CSTF3-202ENST00000431742 S100A8P05109 93 aa9.84□□□□□ -0.83
CSTF3-202ENST00000431742 RAB4AP20338 218 aa9.84□□□□□ -0.83
CSTF3-202ENST00000431742 CAMPP49913 170 aa9.84□□□□□ -0.83
CSTF3-202ENST00000431742 NDUFA5Q16718 116 aa9.84□□□□□ -0.83
CSTF3-202ENST00000431742 LELP1Q5T871 98 aa9.84□□□□□ -0.83
CSTF3-202ENST00000431742 AMN1Q8IY45 258 aa9.84□□□□□ -0.83
CSTF3-202ENST00000431742 Q9H8V8 135 aa9.84□□□□□ -0.83
CSTF3-202ENST00000431742 NIT2Q9NQR4 276 aa9.84□□□□□ -0.83
CSTF3-202ENST00000431742 FAM104BQ5XKR9 115 aa9.83□□□□□ -0.84
CSTF3-202ENST00000431742 Q6ZR54 194 aa9.83□□□□□ -0.84
CSTF3-202ENST00000431742 WFDC10BQ8IUB3 73 aa9.83□□□□□ -0.84
CSTF3-202ENST00000431742 SVBPQ8N300 66 aa9.83□□□□□ -0.84
CSTF3-202ENST00000431742 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
CSTF3-202ENST00000431742 BTF3L4Q96K17 158 aa9.83□□□□□ -0.84
CSTF3-202ENST00000431742 DNAH17Q9UFH2 4485 aa9.83□□□□□ -0.84
CSTF3-202ENST00000431742 IGLV2-18A0A075B6J9 118 aa9.82□□□□□ -0.84
CSTF3-202ENST00000431742 TRAV9-1A0A075B6T8 112 aa9.82□□□□□ -0.84
CSTF3-202ENST00000431742 SIVA1O15304 175 aa9.82□□□□□ -0.84
CSTF3-202ENST00000431742 GAS8-AS1O95177 125 aa9.82□□□□□ -0.84
CSTF3-202ENST00000431742 C4orf48Q5BLP8 95 aa9.82□□□□□ -0.84
CSTF3-202ENST00000431742 DAZ4Q86SG3 579 aaKnown RBP9.82□□□□□ -0.84
CSTF3-202ENST00000431742 RPL39LQ96EH5 51 aaKnown RBP9.82□□□□□ -0.84
CSTF3-202ENST00000431742 DAZ3Q9NR90 486 aaKnown RBP9.82□□□□□ -0.84
CSTF3-202ENST00000431742 TNFRSF18Q9Y5U5 241 aa9.82□□□□□ -0.84
CSTF3-202ENST00000431742 TRBV6-5A0A0K0K1A5 114 aa9.81□□□□□ -0.84
CSTF3-202ENST00000431742 NBDYA0A0U1RRE5 68 aa9.81□□□□□ -0.84
CSTF3-202ENST00000431742 SNAPINO95295 136 aa9.81□□□□□ -0.84
CSTF3-202ENST00000431742 DNAH10OSP0CZ25 163 aa9.81□□□□□ -0.84
CSTF3-202ENST00000431742 MRPL51Q4U2R6 128 aaKnown RBP9.81□□□□□ -0.84
CSTF3-202ENST00000431742 KCNIP4Q6PIL6 250 aa9.81□□□□□ -0.84
CSTF3-202ENST00000431742 RPS10P5Q9NQ39 176 aa9.81□□□□□ -0.84
CSTF3-202ENST00000431742 TRAV8-6A0A0B4J262 113 aa9.8□□□□□ -0.84
CSTF3-202ENST00000431742 IGHV3-38A0A0C4DH36 116 aa9.8□□□□□ -0.84
CSTF3-202ENST00000431742 RPS10P46783 165 aaKnown RBP9.8□□□□□ -0.84
CSTF3-202ENST00000431742 OR10J3Q5JRS4 329 aa9.8□□□□□ -0.84
CSTF3-202ENST00000431742 KRTAP1-5Q9BYS1 174 aa9.8□□□□□ -0.84
CSTF3-202ENST00000431742 TRBV6-8A0A0A6YYG3 113 aa9.79□□□□□ -0.84
CSTF3-202ENST00000431742 NCR2O95944 276 aa9.79□□□□□ -0.84
CSTF3-202ENST00000431742 NTM-AS1Q6ZSK4 140 aa9.79□□□□□ -0.84
CSTF3-202ENST00000431742 NRACQ8N912 160 aa9.79□□□□□ -0.84
CSTF3-202ENST00000431742 FAT2Q9NYQ8 4349 aa9.78□□□□□ -0.84
CSTF3-202ENST00000431742 SMKR1H3BMG3 65 aa9.78□□□□□ -0.84
CSTF3-202ENST00000431742 M0R2N4 97 aa9.78□□□□□ -0.84
CSTF3-202ENST00000431742 S100PP25815 95 aa9.78□□□□□ -0.84
CSTF3-202ENST00000431742 TMEM97Q5BJF2 176 aa9.78□□□□□ -0.84
CSTF3-202ENST00000431742 TTC32Q5I0X7 151 aa9.78□□□□□ -0.84
CSTF3-202ENST00000431742 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
CSTF3-202ENST00000431742 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.78□□□□□ -0.84
CSTF3-202ENST00000431742 URGCP-MRPS24S4R325 110 aa9.78□□□□□ -0.84
CSTF3-202ENST00000431742 SDHAF1A6NFY7 115 aa9.77□□□□□ -0.85
CSTF3-202ENST00000431742 LCE2AQ5TA79 106 aaPredicted RBP9.77□□□□□ -0.85
CSTF3-202ENST00000431742 K7EP13 123 aa9.76□□□□□ -0.85
CSTF3-202ENST00000431742 PPP1R17O96001 155 aa9.76□□□□□ -0.85
CSTF3-202ENST00000431742 IQCJQ1A5X6 159 aa9.76□□□□□ -0.85
CSTF3-202ENST00000431742 ATRAIDQ6UW56 229 aa9.76□□□□□ -0.85
CSTF3-202ENST00000431742 TMEM136Q6ZRR5 245 aa9.76□□□□□ -0.85
CSTF3-202ENST00000431742 TMEM70Q9BUB7 260 aa9.76□□□□□ -0.85
CSTF3-202ENST00000431742 TRBV24-1A0A075B6N3 115 aa9.75□□□□□ -0.85
CSTF3-202ENST00000431742 D6R8Y8 96 aa9.75□□□□□ -0.85
CSTF3-202ENST00000431742 PPBPP02775 128 aa9.75□□□□□ -0.85
CSTF3-202ENST00000431742 CKS2P33552 79 aa9.75□□□□□ -0.85
CSTF3-202ENST00000431742 POLR2KP53803 58 aaKnown RBP9.75□□□□□ -0.85
CSTF3-202ENST00000431742 NIT1Q86X76 327 aa9.75□□□□□ -0.85
CSTF3-202ENST00000431742 Q8N3U1 123 aa9.75□□□□□ -0.85
CSTF3-202ENST00000431742 ST20Q9HBF5 79 aa9.75□□□□□ -0.85
CSTF3-202ENST00000431742 TRBV25-1A0A075B6N4 114 aa9.74□□□□□ -0.85
CSTF3-202ENST00000431742 IGHV1-24A0A0C4DH33 117 aa9.74□□□□□ -0.85
CSTF3-202ENST00000431742 TRBV27A0A0K0K1C4 114 aa9.74□□□□□ -0.85
CSTF3-202ENST00000431742 SUMO2P61956 95 aaKnown RBP9.74□□□□□ -0.85
CSTF3-202ENST00000431742 ELOBQ15370 118 aa9.74□□□□□ -0.85
CSTF3-202ENST00000431742 I3L3M4 83 aa9.73□□□□□ -0.85
CSTF3-202ENST00000431742 PHOX2AO14813 284 aa9.73□□□□□ -0.85
CSTF3-202ENST00000431742 TNFRSF6BO95407 300 aa9.73□□□□□ -0.85
CSTF3-202ENST00000431742 BTF3P20290 206 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 366.6 ms