RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 OXTP01178 125 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 IGKV1D-16P01601 117 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 RBP4P02753 201 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 MRPL3P09001 348 aaKnown RBP2.78□□□□□ -1.96
HMGB3-203ENST00000430118 ZNF138P52744 262 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 KRTAP10-3P60369 221 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 NMSQ5H8A3 153 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 C3orf22Q8N5N4 141 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 NUP35Q8NFH5 326 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 OR5C1Q8NGR4 320 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 OR10AC1Q8NH08 325 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 PLEKHB2Q96CS7 222 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 ADAT3Q96EY9 351 aaPredicted RBP2.78□□□□□ -1.96
HMGB3-203ENST00000430118 LINC00526Q96FQ7 95 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 GPX7Q96SL4 187 aaPredicted RBP2.78□□□□□ -1.96
HMGB3-203ENST00000430118 SLC25A2Q9BXI2 301 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 FBXL15Q9H469 300 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 TP53TG1Q9Y2A0 90 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 TEX50A0A1B0GTY4 177 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 IGLL5B9A064 214 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 OVOL1O14753 267 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 GAS8-AS1O95177 125 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 IGLV2-23P01705 113 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 HMGN2P05204 90 aaKnown RBP2.77□□□□□ -1.97
HMGB3-203ENST00000430118 IGLC6P0CF74 106 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 CRYGAP11844 174 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 SYNJ2BPP57105 145 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 KRTAP10-6P60371 365 aaPredicted RBP2.77□□□□□ -1.97
HMGB3-203ENST00000430118 QRFPP83859 136 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 EBI3Q14213 229 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 RRN3P1Q2M238 152 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 KRTAP27-1Q3LI81 207 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 Q5XG85 94 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 SH2D6Q7Z4S9 175 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 ATP5L2Q7Z4Y8 100 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 GATD1Q8NB37 220 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 LRRC29Q8WV35 223 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 RNF185Q96GF1 192 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 PBOV1Q9GZY1 135 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 OSTCQ9NRP0 149 aa2.77□□□□□ -1.97
HMGB3-203ENST00000430118 RPUSD1Q9UJJ7 312 aaKnown RBP2.77□□□□□ -1.97
HMGB3-203ENST00000430118 RYR1P21817 5038 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 TMED7-TICAM2A0A0A6YYA0 188 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 IGHV1-69DA0A0B4J2H0 117 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 IGHV3-66A0A0C4DH42 116 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 C3orf85A0A1B0GTC6 90 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 FAM24AA6NFZ4 105 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 K7EN84 100 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 NDUFB2O95178 105 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 LEPROTL1O95214 131 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 PPYP01298 95 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 IGHV1-69P01742 117 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 IGHV1-46P01743 117 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 INSL3P51460 131 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 DYNLT3P51808 116 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 RBM11P57052 281 aaKnown RBP2.76□□□□□ -1.97
HMGB3-203ENST00000430118 FGF12P61328 243 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 RPL30P62888 115 aaKnown RBP2.76□□□□□ -1.97
HMGB3-203ENST00000430118 HERVK_113P63121 156 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 HBG1P69891 147 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 HBG2P69892 147 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 RPL18AQ02543 176 aaKnown RBP2.76□□□□□ -1.97
HMGB3-203ENST00000430118 REG3AQ06141 175 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 LGALS9BQ3B8N2 356 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 C9orf153Q5TBE3 101 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 LINC01590Q5TEZ4 76 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 C1orf140Q5VVS0 124 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 LGALS9CQ6DKI2 356 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 C1orf158Q8N1D5 194 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 SLC22A24Q8N4F4 322 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 Q96M85 177 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 NMNAT3Q96T66 252 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 PRSS27Q9BQR3 290 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 WFDC6Q9BQY6 131 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 NAA38Q9BRA0 125 aaKnown RBP2.76□□□□□ -1.97
HMGB3-203ENST00000430118 HEATR1Q9H583 2144 aaKnown RBP2.76□□□□□ -1.97
HMGB3-203ENST00000430118 C21orf62Q9NYP8 219 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 ZNRD1Q9P1U0 126 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 V9GYV3 84 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 PRR14LQ5THK1 2151 aa2.76□□□□□ -1.97
HMGB3-203ENST00000430118 CSMD3Q7Z407 3707 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 IGLV11-55A0A075B6I3 123 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 TRBV20-1A0A075B6N2 111 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 IGHV3-64DA0A0J9YX35 117 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 LOC107984640A0A0U1RRK4 108 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 WI2-2373I1.2A0A1W2PRP0 233 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 SMIM27A0A1W2PRY6 76 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 IZUMO1RA6ND01 250 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 CPSF4LA6NMK7 179 aaKnown RBP2.75□□□□□ -1.97
HMGB3-203ENST00000430118 C11orf94C9JXX5 98 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 NDUFC2-KCTD14E9PQ53 114 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 LY6LH3BQJ8 138 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 DPM2O94777 84 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 FSTL3O95633 263 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 P0DMU3 169 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 FAM231AP0DMU4 169 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 FAM231CP0DMU5 169 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 PSMB8P28062 276 aa2.75□□□□□ -1.97
HMGB3-203ENST00000430118 HLA-DMBP28068 263 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms