RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 TRAV9-2A0A087WT02 112 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 A0A087X0K7 114 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.36□□□□□ -1.71
PTPRK-211ENST00000429595 A0A1B0GUT8 65 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 RBAKDNA6NC62 111 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 H3BUA1 57 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 HSBP1O75506 76 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 C3orf79P0CE67 100 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 IGLC3P0DOY3 106 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 RPL7P18124 248 aaKnown RBP4.36□□□□□ -1.71
PTPRK-211ENST00000429595 SLAQ13239 276 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 FXYD3Q14802 87 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 PSG3Q16557 428 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 ZNF876PQ49A33 203 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 GDF5OSQ5U4N7 250 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 PET117Q6UWS5 81 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 Q86TA4 180 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 DEFB104AQ8WTQ1 72 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 GTSF1Q8WW33 167 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 MRPL53Q96EL3 112 aaKnown RBP4.36□□□□□ -1.71
PTPRK-211ENST00000429595 RNF125Q96EQ8 232 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 USMG5Q96IX5 58 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 MS4A6AQ9H2W1 248 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 FBXL15Q9H469 300 aa4.36□□□□□ -1.71
PTPRK-211ENST00000429595 TRAV25A0A0B4J276 109 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 LINC01546A6NGU7 62 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 TRBV12-3P01733 135 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 LINC00614P0C842 121 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 CSN1S1P47710 185 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 MRPL54Q6P161 138 aaKnown RBP4.35□□□□□ -1.71
PTPRK-211ENST00000429595 CNFNQ9BYD5 112 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 ST20Q9HBF5 79 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 C21orf62Q9NYP8 219 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 HSPB8Q9UJY1 196 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 PSG8Q9UQ74 426 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 LAMTOR2Q9Y2Q5 125 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 DNAH6Q9C0G6 4158 aa4.35□□□□□ -1.71
PTPRK-211ENST00000429595 TRAV34A0A0B4J273 112 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 NBDYA0A0U1RRE5 68 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 A0A1B0GV90 55 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 TCAPO15273 167 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 GNG7O60262 68 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 PPBPP02775 128 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 CTSGP08311 255 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.71
PTPRK-211ENST00000429595 NDPQ00604 133 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 COL5A1-AS1Q5SY13 56 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 BLNKQ8WV28 456 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 PMCHL2Q9BQD1 86 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 TMEM70Q9BUB7 260 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 LENEPQ9Y5L5 61 aa4.34□□□□□ -1.71
PTPRK-211ENST00000429595 TRBV7-9A0A0J9YWB2 115 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 KRTAP16-1A8MUX0 517 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 F2Z2F3 143 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 M0R2Z0 102 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 CHEK1O14757 476 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 CA1P00915 261 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-211ENST00000429595 CT45A10P0DMU9 189 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 EDN2P20800 178 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 ASIPP42127 132 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 CMC4P56277 68 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-211ENST00000429595 TCL1AP56279 114 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 KRTDAPP60985 99 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 LYZP61626 148 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 GNG5P63218 68 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 ATP5G2Q06055 141 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 KIAA1644Q3SXP7 199 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 TDRG1Q3Y452 100 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 FAM106AQ4KMX7 169 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 OR2D3Q8NGH3 330 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 SLC50A1Q9BRV3 221 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 RABAC1Q9UI14 185 aa4.33□□□□□ -1.72
PTPRK-211ENST00000429595 MYCBP2O75592 4640 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 TRBV7-1A0A0A6YYK4 115 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 OR4C46A6NHA9 309 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 SYS1-DBNDD2H3BUS1 97 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 SIVA1O15304 175 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 LEPROTL1O95214 131 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 OXTP01178 125 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 IL4P05112 153 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 IGLC6P0CF74 106 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 MIFP14174 115 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 CRIP1P50238 77 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 SPATA45Q537H7 98 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 LINC01545Q5VT33 79 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 FAM104BQ5XKR9 115 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 EBLN2Q6P2I7 272 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 ZNF705AQ6ZN79 300 aaPredicted RBP4.32□□□□□ -1.72
PTPRK-211ENST00000429595 GOLT1AQ6ZVE7 132 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 TCF24Q7RTU0 167 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 ZNF502Q8TBZ5 544 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 ORAOV1Q8WV07 137 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 ZC2HC1AQ96GY0 325 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 SPAG8Q99932 426 aaPredicted RBP4.32□□□□□ -1.72
PTPRK-211ENST00000429595 MAP1LC3CQ9BXW4 147 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 TMEM191AQ9H0A3 160 aa4.32□□□□□ -1.72
PTPRK-211ENST00000429595 TMEM189A5PLL7 270 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 FABP5P3A8MUU1 101 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 DLEU1O43261 78 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms