RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 GAS8-AS1O95177 125 aa11.02□□□□□ -0.65
SYNGAP1-203ENST00000428982 TP53TG1Q9Y2A0 90 aa11.02□□□□□ -0.65
SYNGAP1-203ENST00000428982 B4DSR2 109 aa11.01□□□□□ -0.65
SYNGAP1-203ENST00000428982 Q6ZS46 218 aa11.01□□□□□ -0.65
SYNGAP1-203ENST00000428982 RNF185Q96GF1 192 aa11.01□□□□□ -0.65
SYNGAP1-203ENST00000428982 S4R3C0 116 aa11.01□□□□□ -0.65
SYNGAP1-203ENST00000428982 K7EIM0 57 aa11.01□□□□□ -0.65
SYNGAP1-203ENST00000428982 UBE2E1P51965 193 aa11.01□□□□□ -0.65
SYNGAP1-203ENST00000428982 NEXN-AS1Q8NBZ9 246 aa11.01□□□□□ -0.65
SYNGAP1-203ENST00000428982 SDIM1Q6ZPB5 146 aa11.01□□□□□ -0.65
SYNGAP1-203ENST00000428982 TOMM6Q96B49 74 aa11.01□□□□□ -0.65
SYNGAP1-203ENST00000428982 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.01□□□□□ -0.652e-16■■■□□ 15.2
SYNGAP1-203ENST00000428982 PKD1L2Q7Z442 2459 aa11.01□□□□□ -0.65
SYNGAP1-203ENST00000428982 C19orf84I3L1E1 186 aa11□□□□□ -0.65
SYNGAP1-203ENST00000428982 SPRY2O43597 315 aa11□□□□□ -0.65
SYNGAP1-203ENST00000428982 C20orf173Q96LM9 149 aa11□□□□□ -0.65
SYNGAP1-203ENST00000428982 ZFHX4Q86UP3 3567 aa11□□□□□ -0.65
SYNGAP1-203ENST00000428982 RPL11P62913 178 aaKnown RBP11□□□□□ -0.65
SYNGAP1-203ENST00000428982 ERCC8Q13216 396 aa11□□□□□ -0.65
SYNGAP1-203ENST00000428982 KHDC1LQ5JSQ8 128 aa11□□□□□ -0.65
SYNGAP1-203ENST00000428982 FSTL3O95633 263 aa11□□□□□ -0.65
SYNGAP1-203ENST00000428982 NPBQ8NG41 125 aa11□□□□□ -0.65
SYNGAP1-203ENST00000428982 TMEM263Q8WUH6 116 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-203ENST00000428982 BAALC-AS2P0C853 105 aa10.99□□□□□ -0.65
SYNGAP1-203ENST00000428982 CDSNQ15517 529 aa10.98□□□□□ -0.65
SYNGAP1-203ENST00000428982 TRGV3P03979 118 aa10.98□□□□□ -0.65
SYNGAP1-203ENST00000428982 EBI3Q14213 229 aa10.98□□□□□ -0.65
SYNGAP1-203ENST00000428982 LY6EQ16553 131 aa10.98□□□□□ -0.65
SYNGAP1-203ENST00000428982 IGFL4Q6B9Z1 124 aa10.98□□□□□ -0.65
SYNGAP1-203ENST00000428982 SPENQ96T58 3664 aaKnown RBP10.98□□□□□ -0.65
SYNGAP1-203ENST00000428982 IGHV3-23P01764 117 aa10.97□□□□□ -0.65
SYNGAP1-203ENST00000428982 PAX8Q06710 450 aa10.97□□□□□ -0.65
SYNGAP1-203ENST00000428982 C14orf178Q8N769 122 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-203ENST00000428982 DPH3P1Q9H4G8 78 aa10.97□□□□□ -0.65
SYNGAP1-203ENST00000428982 DMXL1Q9Y485 3027 aa10.97□□□□□ -0.65
SYNGAP1-203ENST00000428982 IGHG2P01859 326 aa10.97□□□□□ -0.65
SYNGAP1-203ENST00000428982 DSCAMO60469 2012 aa10.97□□□□□ -0.65
SYNGAP1-203ENST00000428982 TMEM141Q96I45 108 aa10.96□□□□□ -0.65
SYNGAP1-203ENST00000428982 FAM110DQ8TAY7 271 aaPredicted RBP10.96□□□□□ -0.65
SYNGAP1-203ENST00000428982 NACAE9PAV3 2078 aa10.96□□□□□ -0.66
SYNGAP1-203ENST00000428982 C20orf197Q8N268 126 aa10.96□□□□□ -0.66
SYNGAP1-203ENST00000428982 ADARB2-AS1A8MUL3 147 aa10.95□□□□□ -0.66
SYNGAP1-203ENST00000428982 LEPROTO15243 131 aa10.95□□□□□ -0.66
SYNGAP1-203ENST00000428982 MRPL53Q96EL3 112 aaKnown RBP10.95□□□□□ -0.66
SYNGAP1-203ENST00000428982 TET2Q6N021 2002 aaPredicted RBP10.95□□□□□ -0.66
SYNGAP1-203ENST00000428982 IGLV11-55A0A075B6I3 123 aa10.95□□□□□ -0.66
SYNGAP1-203ENST00000428982 MSMBP08118 114 aa10.95□□□□□ -0.66
SYNGAP1-203ENST00000428982 FAM19A4Q96LR4 140 aa10.95□□□□□ -0.66
SYNGAP1-203ENST00000428982 POM121L12Q8N7R1 296 aa10.95□□□□□ -0.66
SYNGAP1-203ENST00000428982 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
SYNGAP1-203ENST00000428982 TRBV7-1A0A0A6YYK4 115 aa10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 TRAV21A0A0B4J279 112 aa10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 LINC00336Q6ZUF6 198 aa10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 LINC01356Q8N9X3 169 aa10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 USP17L23D6RBM5 183 aa10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 S100A7L2Q5SY68 101 aa10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 C9orf139Q6ZV77 190 aa10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 TRAV12-2A0A075B6T6 113 aa10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 CRYGDP07320 174 aa10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 HOXB4P17483 251 aaPredicted RBP10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 CELSR3Q9NYQ7 3312 aa10.94□□□□□ -0.66
SYNGAP1-203ENST00000428982 C15orf32Q32M92 178 aa10.93□□□□□ -0.66
SYNGAP1-203ENST00000428982 LST1O00453 97 aa10.93□□□□□ -0.66
SYNGAP1-203ENST00000428982 CLEC19AQ6UXS0 136 aa10.93□□□□□ -0.66
SYNGAP1-203ENST00000428982 GHRHP01286 108 aa10.93□□□□□ -0.66
SYNGAP1-203ENST00000428982 IGHV3-35A0A0C4DH35 117 aa10.93□□□□□ -0.66
SYNGAP1-203ENST00000428982 RNF223E7ERA6 249 aa10.93□□□□□ -0.66
SYNGAP1-203ENST00000428982 DAZ2Q13117 558 aaKnown RBP10.93□□□□□ -0.66
SYNGAP1-203ENST00000428982 DAZ4Q86SG3 579 aaKnown RBP10.93□□□□□ -0.66
SYNGAP1-203ENST00000428982 DAZ1Q9NQZ3 744 aaKnown RBP10.93□□□□□ -0.66
SYNGAP1-203ENST00000428982 DAZ3Q9NR90 486 aaKnown RBP10.93□□□□□ -0.66
SYNGAP1-203ENST00000428982 MYO18BQ8IUG5 2567 aa10.92□□□□□ -0.66
SYNGAP1-203ENST00000428982 SMIM26A0A096LP01 95 aa10.92□□□□□ -0.66
SYNGAP1-203ENST00000428982 DYNAPQ8N1N2 210 aa10.92□□□□□ -0.66
SYNGAP1-203ENST00000428982 C9orf85Q96MD7 179 aa10.92□□□□□ -0.66
SYNGAP1-203ENST00000428982 ZFYVE26Q68DK2 2539 aa10.92□□□□□ -0.66
SYNGAP1-203ENST00000428982 SAA4P35542 130 aa10.92□□□□□ -0.66
SYNGAP1-203ENST00000428982 SERP1Q9Y6X1 66 aa10.92□□□□□ -0.66
SYNGAP1-203ENST00000428982 NAV3Q8IVL0 2385 aa10.91□□□□□ -0.66
SYNGAP1-203ENST00000428982 VCYO14598 125 aa10.91□□□□□ -0.66
SYNGAP1-203ENST00000428982 A0A0U1RRA0 63 aa10.91□□□□□ -0.66
SYNGAP1-203ENST00000428982 BRD3OSQ6XYD6 125 aa10.91□□□□□ -0.66
SYNGAP1-203ENST00000428982 RPL39LQ96EH5 51 aaKnown RBP10.91□□□□□ -0.66
SYNGAP1-203ENST00000428982 IGHV1-69DA0A0B4J2H0 117 aa10.91□□□□□ -0.66
SYNGAP1-203ENST00000428982 I3L3M4 83 aa10.91□□□□□ -0.66
SYNGAP1-203ENST00000428982 C11orf71Q6IPW1 123 aa10.91□□□□□ -0.66
SYNGAP1-203ENST00000428982 RETNQ9HD89 108 aa10.91□□□□□ -0.66
SYNGAP1-203ENST00000428982 IGHV3OR16-8A0A075B7F1 116 aa10.9□□□□□ -0.66
SYNGAP1-203ENST00000428982 ZNF80P51504 273 aaPredicted RBP10.9□□□□□ -0.66
SYNGAP1-203ENST00000428982 NDUFA12Q9UI09 145 aa10.9□□□□□ -0.66
SYNGAP1-203ENST00000428982 LENEPQ9Y5L5 61 aa10.9□□□□□ -0.66
SYNGAP1-203ENST00000428982 FAM74A4Q5TZK3 123 aa10.9□□□□□ -0.66
SYNGAP1-203ENST00000428982 C11orf68Q9H3H3 251 aaKnown RBP10.9□□□□□ -0.66
SYNGAP1-203ENST00000428982 CFAP47Q6ZTR5 3102 aa10.9□□□□□ -0.66
SYNGAP1-203ENST00000428982 ELANEP08246 267 aa10.9□□□□□ -0.67
SYNGAP1-203ENST00000428982 EPG5Q9HCE0 2579 aa10.89□□□□□ -0.67
SYNGAP1-203ENST00000428982 NDUFC2-KCTD14E9PQ53 114 aa10.89□□□□□ -0.67
SYNGAP1-203ENST00000428982 SIRPDQ9H106 197 aa10.89□□□□□ -0.67
SYNGAP1-203ENST00000428982 IGHV4-61A0A0C4DH41 118 aa10.89□□□□□ -0.67
SYNGAP1-203ENST00000428982 LY6LH3BQJ8 138 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms