RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 KIF25-AS1Q9Y6Z4 181 aa13.74□□□□□ -0.21
PCGF3-204ENST00000427463 EIF5AP63241 154 aaKnown RBP13.73□□□□□ -0.21
PCGF3-204ENST00000427463 C11orf52Q96A22 123 aa13.73□□□□□ -0.21
PCGF3-204ENST00000427463 C1orf43Q9BWL3 253 aa13.73□□□□□ -0.21
PCGF3-204ENST00000427463 F5H697 171 aa13.72□□□□□ -0.21
PCGF3-204ENST00000427463 SSTP61278 116 aa13.72□□□□□ -0.21
PCGF3-204ENST00000427463 CCL20P78556 96 aa13.72□□□□□ -0.21
PCGF3-204ENST00000427463 NTM-AS1Q6ZSK4 140 aa13.72□□□□□ -0.21
PCGF3-204ENST00000427463 MANBALQ9NQG1 85 aa13.72□□□□□ -0.21
PCGF3-204ENST00000427463 GNG13Q9P2W3 67 aa13.72□□□□□ -0.21
PCGF3-204ENST00000427463 VAX2Q9UIW0 290 aa13.72□□□□□ -0.21
PCGF3-204ENST00000427463 CRPP02741 224 aa13.71□□□□□ -0.21
PCGF3-204ENST00000427463 ANGP03950 147 aaKnown RBP13.71□□□□□ -0.21
PCGF3-204ENST00000427463 AP1S3Q96PC3 154 aa13.71□□□□□ -0.21
PCGF3-204ENST00000427463 CHCHD5Q9BSY4 110 aa13.71□□□□□ -0.21
PCGF3-204ENST00000427463 CHAC1Q9BUX1 264 aa13.71□□□□□ -0.21
PCGF3-204ENST00000427463 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.7□□□□□ -0.22
PCGF3-204ENST00000427463 TRAV1-1A0A0B4J248 108 aa13.69□□□□□ -0.22
PCGF3-204ENST00000427463 SMIM17P0DL12 118 aa13.69□□□□□ -0.22
PCGF3-204ENST00000427463 PKIAP61925 76 aa13.69□□□□□ -0.22
PCGF3-204ENST00000427463 C14orf177Q52M58 125 aa13.69□□□□□ -0.22
PCGF3-204ENST00000427463 CENPWQ5EE01 88 aa13.69□□□□□ -0.22
PCGF3-204ENST00000427463 IGLV2-8P01709 118 aa13.68□□□□□ -0.22
PCGF3-204ENST00000427463 IGLC6P0CF74 106 aa13.68□□□□□ -0.22
PCGF3-204ENST00000427463 GZMBP10144 247 aa13.68□□□□□ -0.22
PCGF3-204ENST00000427463 TMEM97Q5BJF2 176 aa13.68□□□□□ -0.22
PCGF3-204ENST00000427463 C19orf71A6NCJ1 209 aa13.66□□□□□ -0.22
PCGF3-204ENST00000427463 USP17L23D6RBM5 183 aa13.66□□□□□ -0.22
PCGF3-204ENST00000427463 J3QL48 77 aa13.66□□□□□ -0.22
PCGF3-204ENST00000427463 HLA-DQA1P01909 254 aa13.66□□□□□ -0.22
PCGF3-204ENST00000427463 MIAQ16674 131 aa13.66□□□□□ -0.22
PCGF3-204ENST00000427463 FER1L6-AS1Q8NA97 138 aa13.66□□□□□ -0.22
PCGF3-204ENST00000427463 CIRBP-AS1Q8TBR5 109 aa13.66□□□□□ -0.22
PCGF3-204ENST00000427463 TPPP3Q9BW30 176 aa13.66□□□□□ -0.22
PCGF3-204ENST00000427463 PRR34Q9NV39 138 aa13.66□□□□□ -0.22
PCGF3-204ENST00000427463 TRBV25-1A0A075B6N4 114 aa13.65□□□□□ -0.22
PCGF3-204ENST00000427463 M0QY20 66 aa13.65□□□□□ -0.22
PCGF3-204ENST00000427463 RAB5CP51148 216 aa13.65□□□□□ -0.22
PCGF3-204ENST00000427463 KRTAP10-4P60372 401 aaPredicted RBP13.65□□□□□ -0.22
PCGF3-204ENST00000427463 RBX1P62877 108 aa13.65□□□□□ -0.22
PCGF3-204ENST00000427463 OR2D3Q8NGH3 330 aa13.65□□□□□ -0.22
PCGF3-204ENST00000427463 DEFB104AQ8WTQ1 72 aa13.65□□□□□ -0.22
PCGF3-204ENST00000427463 MGPP08493 103 aa13.64□□□□□ -0.23
PCGF3-204ENST00000427463 RPS20P60866 119 aaKnown RBP13.64□□□□□ -0.23
PCGF3-204ENST00000427463 GAGE6Q13070 117 aa13.64□□□□□ -0.23
PCGF3-204ENST00000427463 IQCJQ1A5X6 159 aa13.64□□□□□ -0.23
PCGF3-204ENST00000427463 CLPSL2Q6UWE3 100 aa13.64□□□□□ -0.23
PCGF3-204ENST00000427463 DAZAP1Q96EP5 407 aaKnown RBP13.64□□□□□ -0.23
PCGF3-204ENST00000427463 SMIM12Q96EX1 92 aa13.64□□□□□ -0.23
PCGF3-204ENST00000427463 RAB19A4D1S5 217 aa13.63□□□□□ -0.23
PCGF3-204ENST00000427463 KRTAP29-1A8MX34 341 aaPredicted RBP13.63□□□□□ -0.23
PCGF3-204ENST00000427463 MEF2BQ02080 365 aaPredicted RBP13.63□□□□□ -0.23
PCGF3-204ENST00000427463 SUMO4Q6EEV6 95 aa13.63□□□□□ -0.23
PCGF3-204ENST00000427463 KRTAP26-1Q6PEX3 210 aa13.63□□□□□ -0.23
PCGF3-204ENST00000427463 LINC00269Q8N2A0 174 aa13.63□□□□□ -0.23
PCGF3-204ENST00000427463 TRBV20OR9-2A0A075B6H5 130 aa13.62□□□□□ -0.23
PCGF3-204ENST00000427463 GNG4P50150 75 aa13.62□□□□□ -0.23
PCGF3-204ENST00000427463 SULT1A2P50226 295 aa13.62□□□□□ -0.23
PCGF3-204ENST00000427463 CACNG7P62955 275 aa13.62□□□□□ -0.23
PCGF3-204ENST00000427463 EIF5AL1Q6IS14 154 aaKnown RBP13.62□□□□□ -0.23
PCGF3-204ENST00000427463 IGHV1-24A0A0C4DH33 117 aa13.61□□□□□ -0.23
PCGF3-204ENST00000427463 TEX46H3BTG2 121 aa13.61□□□□□ -0.23
PCGF3-204ENST00000427463 H7C1H1 209 aa13.61□□□□□ -0.23
PCGF3-204ENST00000427463 PRSS1P07477 247 aa13.61□□□□□ -0.23
PCGF3-204ENST00000427463 PDE6DO43924 150 aa13.6□□□□□ -0.23
PCGF3-204ENST00000427463 P01737 135 aa13.6□□□□□ -0.23
PCGF3-204ENST00000427463 LRP1Q07954 4544 aaKnown RBP13.59□□□□□ -0.23
PCGF3-204ENST00000427463 XKRY2A2RUG3 117 aa13.59□□□□□ -0.23
PCGF3-204ENST00000427463 F2Z2F3 143 aa13.59□□□□□ -0.23
PCGF3-204ENST00000427463 BCL2P10415 239 aa13.58□□□□□ -0.24
PCGF3-204ENST00000427463 NKX2-5P52952 324 aaPredicted RBP13.58□□□□□ -0.24
PCGF3-204ENST00000427463 LYZL1Q6UWQ5 148 aa13.58□□□□□ -0.24
PCGF3-204ENST00000427463 MED9Q9NWA0 146 aa13.58□□□□□ -0.24
PCGF3-204ENST00000427463 IFNA1P01562 189 aa13.57□□□□□ -0.24
PCGF3-204ENST00000427463 REG3AQ06141 175 aa13.57□□□□□ -0.24
PCGF3-204ENST00000427463 DGAT2L7PQ6IED9 249 aa13.57□□□□□ -0.24
PCGF3-204ENST00000427463 RASL11AQ6T310 242 aa13.57□□□□□ -0.24
PCGF3-204ENST00000427463 C20orf203Q8NBC4 194 aa13.57□□□□□ -0.24
PCGF3-204ENST00000427463 TRGC1P0CF51 173 aa13.56□□□□□ -0.24
PCGF3-204ENST00000427463 C9orf163Q8N9P6 203 aa13.56□□□□□ -0.24
PCGF3-204ENST00000427463 TMEM243Q9BU79 118 aa13.56□□□□□ -0.24
PCGF3-204ENST00000427463 DPH3P1Q9H4G8 78 aa13.56□□□□□ -0.24
PCGF3-204ENST00000427463 BIN3Q9NQY0 253 aa13.56□□□□□ -0.24
PCGF3-204ENST00000427463 IGLV10-54A0A075B6I4 117 aa13.55□□□□□ -0.24
PCGF3-204ENST00000427463 NTF3P20783 257 aa13.55□□□□□ -0.24
PCGF3-204ENST00000427463 CTRLP40313 264 aa13.55□□□□□ -0.24
PCGF3-204ENST00000427463 TCTE3Q8IZS6 198 aa13.55□□□□□ -0.24
PCGF3-204ENST00000427463 PGLYRP4Q96LB8 373 aa13.55□□□□□ -0.24
PCGF3-204ENST00000427463 IGLV4-60A0A075B6I1 120 aa13.54□□□□□ -0.24
PCGF3-204ENST00000427463 A0A1B0GUV1 79 aa13.54□□□□□ -0.24
PCGF3-204ENST00000427463 C9orf62Q8N4C0 152 aa13.54□□□□□ -0.24
PCGF3-204ENST00000427463 GFRA4Q9GZZ7 299 aa13.54□□□□□ -0.24
PCGF3-204ENST00000427463 NIT2Q9NQR4 276 aa13.54□□□□□ -0.24
PCGF3-204ENST00000427463 PKHD1L1Q86WI1 4243 aa13.53□□□□□ -0.24
PCGF3-204ENST00000427463 SLC51BQ86UW2 128 aa13.53□□□□□ -0.24
PCGF3-204ENST00000427463 NUDT10Q8NFP7 164 aa13.53□□□□□ -0.24
PCGF3-204ENST00000427463 NUDT11Q96G61 164 aa13.53□□□□□ -0.24
PCGF3-204ENST00000427463 CNFNQ9BYD5 112 aa13.53□□□□□ -0.24
PCGF3-204ENST00000427463 WDR73Q6P4I2 378 aa13.52□□□□□ -0.25
PCGF3-204ENST00000427463 CLRN3Q8NCR9 226 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms