RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 DAZ4Q86SG3 579 aaKnown RBP11.71□□□□□ -0.53
SLC6A1-202ENST00000425938 NIT1Q86X76 327 aa11.71□□□□□ -0.53
SLC6A1-202ENST00000425938 OCC1Q8TAD7 63 aa11.71□□□□□ -0.53
SLC6A1-202ENST00000425938 RPP21Q9H633 154 aaKnown RBP11.71□□□□□ -0.53
SLC6A1-202ENST00000425938 DAZ3Q9NR90 486 aaKnown RBP11.71□□□□□ -0.53
SLC6A1-202ENST00000425938 KIF25-AS1Q9Y6Z4 181 aa11.71□□□□□ -0.53
SLC6A1-202ENST00000425938 TRGC1P0CF51 173 aa11.7□□□□□ -0.54
SLC6A1-202ENST00000425938 LYZL1Q6UWQ5 148 aa11.7□□□□□ -0.54
SLC6A1-202ENST00000425938 MAPKAPK5-AS1Q8N8E1 139 aa11.7□□□□□ -0.54
SLC6A1-202ENST00000425938 CHCHD7Q9BUK0 85 aa11.7□□□□□ -0.54
SLC6A1-202ENST00000425938 EIF5A2Q9GZV4 153 aaKnown RBP11.7□□□□□ -0.54
SLC6A1-202ENST00000425938 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
SLC6A1-202ENST00000425938 H7C1H1 209 aa11.69□□□□□ -0.54
SLC6A1-202ENST00000425938 K7EN84 100 aa11.69□□□□□ -0.54
SLC6A1-202ENST00000425938 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
SLC6A1-202ENST00000425938 CEBPGP53567 150 aa11.69□□□□□ -0.54
SLC6A1-202ENST00000425938 ELOBQ15370 118 aa11.69□□□□□ -0.54
SLC6A1-202ENST00000425938 KRTAP4-5Q9BYR2 181 aa11.69□□□□□ -0.54
SLC6A1-202ENST00000425938 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
SLC6A1-202ENST00000425938 LRCOL1A6NCL2 159 aa11.68□□□□□ -0.54
SLC6A1-202ENST00000425938 TMEM97Q5BJF2 176 aa11.68□□□□□ -0.54
SLC6A1-202ENST00000425938 WDR73Q6P4I2 378 aa11.68□□□□□ -0.54
SLC6A1-202ENST00000425938 RMI2Q96E14 147 aa11.68□□□□□ -0.54
SLC6A1-202ENST00000425938 TMEM262E9PQX1 116 aa11.67□□□□□ -0.54
SLC6A1-202ENST00000425938 NTF3P20783 257 aa11.67□□□□□ -0.54
SLC6A1-202ENST00000425938 CTRLP40313 264 aa11.67□□□□□ -0.54
SLC6A1-202ENST00000425938 KLK12Q9UKR0 248 aa11.67□□□□□ -0.54
SLC6A1-202ENST00000425938 COX11Q9Y6N1 276 aa11.67□□□□□ -0.54
SLC6A1-202ENST00000425938 NDUFS6O75380 124 aaKnown RBP11.66□□□□□ -0.54
SLC6A1-202ENST00000425938 PKIAP61925 76 aa11.66□□□□□ -0.54
SLC6A1-202ENST00000425938 SUMO4Q6EEV6 95 aa11.66□□□□□ -0.54
SLC6A1-202ENST00000425938 DNAJC30Q96LL9 226 aa11.66□□□□□ -0.54
SLC6A1-202ENST00000425938 FAM210AQ96ND0 272 aa11.66□□□□□ -0.54
SLC6A1-202ENST00000425938 DPH3P1Q9H4G8 78 aa11.66□□□□□ -0.54
SLC6A1-202ENST00000425938 M0QY20 66 aa11.65□□□□□ -0.54
SLC6A1-202ENST00000425938 GATCO43716 136 aaKnown RBP11.65□□□□□ -0.54
SLC6A1-202ENST00000425938 TWIST1Q15672 202 aa11.65□□□□□ -0.54
SLC6A1-202ENST00000425938 NTN5Q8WTR8 489 aaPredicted RBP11.65□□□□□ -0.54
SLC6A1-202ENST00000425938 SMIM7Q9BQ49 75 aa11.65□□□□□ -0.54
SLC6A1-202ENST00000425938 CHCHD5Q9BSY4 110 aa11.65□□□□□ -0.54
SLC6A1-202ENST00000425938 IGLV5-52A0A0A0MRZ9 124 aa11.64□□□□□ -0.55
SLC6A1-202ENST00000425938 FAM231DQ6ZW35 169 aa11.64□□□□□ -0.55
SLC6A1-202ENST00000425938 Q8N1X5 172 aa11.64□□□□□ -0.55
SLC6A1-202ENST00000425938 Q8N814 137 aa11.64□□□□□ -0.55
SLC6A1-202ENST00000425938 UBE2WQ96B02 151 aa11.64□□□□□ -0.55
SLC6A1-202ENST00000425938 CNFNQ9BYD5 112 aa11.64□□□□□ -0.55
SLC6A1-202ENST00000425938 A8MWL6 223 aa11.63□□□□□ -0.55
SLC6A1-202ENST00000425938 GCSHP23434 173 aa11.63□□□□□ -0.55
SLC6A1-202ENST00000425938 RASL11AQ6T310 242 aa11.63□□□□□ -0.55
SLC6A1-202ENST00000425938 TRBV25-1A0A075B6N4 114 aa11.62□□□□□ -0.55
SLC6A1-202ENST00000425938 IGKV2D-24A0A075B6R9 120 aa11.62□□□□□ -0.55
SLC6A1-202ENST00000425938 ZNF727A8MUV8 499 aa11.62□□□□□ -0.55
SLC6A1-202ENST00000425938 Q0VG73 95 aa11.62□□□□□ -0.55
SLC6A1-202ENST00000425938 SMIM15Q7Z3B0 74 aa11.62□□□□□ -0.55
SLC6A1-202ENST00000425938 CRPP02741 224 aa11.61□□□□□ -0.55
SLC6A1-202ENST00000425938 MPV17L2Q567V2 206 aa11.61□□□□□ -0.55
SLC6A1-202ENST00000425938 CT83Q5H943 113 aa11.61□□□□□ -0.55
SLC6A1-202ENST00000425938 NTM-AS1Q6ZSK4 140 aa11.61□□□□□ -0.55
SLC6A1-202ENST00000425938 C15orf54Q8N8G6 183 aa11.61□□□□□ -0.55
SLC6A1-202ENST00000425938 GTSF1Q8WW33 167 aa11.61□□□□□ -0.55
SLC6A1-202ENST00000425938 IGHV1-24A0A0C4DH33 117 aa11.6□□□□□ -0.55
SLC6A1-202ENST00000425938 ANGP03950 147 aaKnown RBP11.6□□□□□ -0.55
SLC6A1-202ENST00000425938 SRP19P09132 144 aaKnown RBP11.6□□□□□ -0.55
SLC6A1-202ENST00000425938 KRTAP10-1P60331 282 aa11.6□□□□□ -0.55
SLC6A1-202ENST00000425938 LINC01551Q86U37 167 aa11.6□□□□□ -0.55
SLC6A1-202ENST00000425938 BORCS7Q96B45 105 aa11.6□□□□□ -0.55
SLC6A1-202ENST00000425938 NIT2Q9NQR4 276 aa11.6□□□□□ -0.55
SLC6A1-202ENST00000425938 IQCJQ1A5X6 159 aa11.59□□□□□ -0.55
SLC6A1-202ENST00000425938 PGLYRP4Q96LB8 373 aa11.59□□□□□ -0.55
SLC6A1-202ENST00000425938 LECT2O14960 151 aa11.58□□□□□ -0.56
SLC6A1-202ENST00000425938 GAGE6Q13070 117 aa11.58□□□□□ -0.56
SLC6A1-202ENST00000425938 WFDC2Q14508 124 aa11.58□□□□□ -0.56
SLC6A1-202ENST00000425938 ATRAIDQ6UW56 229 aa11.58□□□□□ -0.56
SLC6A1-202ENST00000425938 TEX261Q6UWH6 196 aa11.58□□□□□ -0.56
SLC6A1-202ENST00000425938 BAALCQ8WXS3 180 aa11.58□□□□□ -0.56
SLC6A1-202ENST00000425938 FRZBQ92765 325 aa11.58□□□□□ -0.56
SLC6A1-202ENST00000425938 C1orf43Q9BWL3 253 aa11.58□□□□□ -0.56
SLC6A1-202ENST00000425938 FAM74A3Q4VXF1 159 aa11.57□□□□□ -0.56
SLC6A1-202ENST00000425938 Q8N976 141 aa11.57□□□□□ -0.56
SLC6A1-202ENST00000425938 FOXA3P55318 350 aaPredicted RBP11.56□□□□□ -0.56
SLC6A1-202ENST00000425938 RBX1P62877 108 aa11.56□□□□□ -0.56
SLC6A1-202ENST00000425938 ENHOQ6UWT2 76 aa11.56□□□□□ -0.56
SLC6A1-202ENST00000425938 TSKUQ8WUA8 353 aa11.56□□□□□ -0.56
SLC6A1-202ENST00000425938 TMEM243Q9BU79 118 aa11.56□□□□□ -0.56
SLC6A1-202ENST00000425938 OSTCQ9NRP0 149 aa11.56□□□□□ -0.56
SLC6A1-202ENST00000425938 COTL1Q14019 142 aa11.55□□□□□ -0.56
SLC6A1-202ENST00000425938 PEA15Q15121 130 aa11.55□□□□□ -0.56
SLC6A1-202ENST00000425938 MIAQ16674 131 aa11.55□□□□□ -0.56
SLC6A1-202ENST00000425938 TMEM241Q24JQ0 296 aa11.55□□□□□ -0.56
SLC6A1-202ENST00000425938 GATD1Q8NB37 220 aa11.55□□□□□ -0.56
SLC6A1-202ENST00000425938 GFRA4Q9GZZ7 299 aa11.55□□□□□ -0.56
SLC6A1-202ENST00000425938 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.54□□□□□ -0.56
SLC6A1-202ENST00000425938 TRAV26-2A0A0B4J265 109 aa11.54□□□□□ -0.56
SLC6A1-202ENST00000425938 FAM231BA6NCW3 169 aa11.54□□□□□ -0.56
SLC6A1-202ENST00000425938 HIGD1CA8MV81 97 aa11.54□□□□□ -0.56
SLC6A1-202ENST00000425938 XGP55808 180 aa11.54□□□□□ -0.56
SLC6A1-202ENST00000425938 TMEM70Q9BUB7 260 aa11.54□□□□□ -0.56
SLC6A1-202ENST00000425938 A0A1B0GUT8 65 aa11.53□□□□□ -0.56
SLC6A1-202ENST00000425938 UBE2L6O14933 153 aa11.53□□□□□ -0.56
SLC6A1-202ENST00000425938 SMDT1Q9H4I9 107 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms