RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 NEXN-AS1Q8NBZ9 246 aa12.17□□□□□ -0.46
LINC00271-201ENST00000421378 FRZBQ92765 325 aa12.17□□□□□ -0.46
LINC00271-201ENST00000421378 LINC00694P0DN24 101 aa12.16□□□□□ -0.46
LINC00271-201ENST00000421378 ELOBQ15370 118 aa12.16□□□□□ -0.46
LINC00271-201ENST00000421378 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
LINC00271-201ENST00000421378 MRAP2Q96G30 205 aa12.16□□□□□ -0.46
LINC00271-201ENST00000421378 LYSTQ99698 3801 aa12.15□□□□□ -0.46
LINC00271-201ENST00000421378 SMCO4Q9NRQ5 59 aa12.15□□□□□ -0.46
LINC00271-201ENST00000421378 ATP6V1G1O75348 118 aa12.14□□□□□ -0.47
LINC00271-201ENST00000421378 MRPL51Q4U2R6 128 aaKnown RBP12.14□□□□□ -0.47
LINC00271-201ENST00000421378 CBLN2Q8IUK8 224 aa12.14□□□□□ -0.47
LINC00271-201ENST00000421378 NIT2Q9NQR4 276 aa12.14□□□□□ -0.47
LINC00271-201ENST00000421378 TNFRSF18Q9Y5U5 241 aa12.14□□□□□ -0.47
LINC00271-201ENST00000421378 TGIF2-C20orf24A0A0A6YYL0 155 aa12.13□□□□□ -0.47
LINC00271-201ENST00000421378 CCL18P55774 89 aa12.13□□□□□ -0.47
LINC00271-201ENST00000421378 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
LINC00271-201ENST00000421378 DNAJC30Q96LL9 226 aa12.13□□□□□ -0.47
LINC00271-201ENST00000421378 TRBV24-1A0A075B6N3 115 aa12.13□□□□□ -0.47
LINC00271-201ENST00000421378 UBE2D3P61077 147 aa12.13□□□□□ -0.47
LINC00271-201ENST00000421378 UBE2D2P62837 147 aa12.13□□□□□ -0.47
LINC00271-201ENST00000421378 RPL39LQ96EH5 51 aaKnown RBP12.13□□□□□ -0.47
LINC00271-201ENST00000421378 GAS8-AS1O95177 125 aa12.12□□□□□ -0.47
LINC00271-201ENST00000421378 NCR2O95944 276 aa12.12□□□□□ -0.47
LINC00271-201ENST00000421378 CKS2P33552 79 aa12.12□□□□□ -0.47
LINC00271-201ENST00000421378 ESRGQ1W209 222 aa12.12□□□□□ -0.47
LINC00271-201ENST00000421378 COX19Q49B96 90 aa12.12□□□□□ -0.47
LINC00271-201ENST00000421378 TMEM136Q6ZRR5 245 aa12.12□□□□□ -0.47
LINC00271-201ENST00000421378 SMKR1H3BMG3 65 aa12.11□□□□□ -0.47
LINC00271-201ENST00000421378 HLA-DQA1P01909 254 aa12.11□□□□□ -0.47
LINC00271-201ENST00000421378 S100A1P23297 94 aa12.11□□□□□ -0.47
LINC00271-201ENST00000421378 OR10J3Q5JRS4 329 aa12.11□□□□□ -0.47
LINC00271-201ENST00000421378 LGALS9CQ6DKI2 356 aa12.11□□□□□ -0.47
LINC00271-201ENST00000421378 LYPD5Q6UWN5 251 aa12.11□□□□□ -0.47
LINC00271-201ENST00000421378 UBE2DNLQ8IWF7 75 aa12.11□□□□□ -0.47
LINC00271-201ENST00000421378 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.11□□□□□ -0.47
LINC00271-201ENST00000421378 GNB1LQ9BYB4 327 aa12.11□□□□□ -0.47
LINC00271-201ENST00000421378 D6R8Y8 96 aa12.1□□□□□ -0.47
LINC00271-201ENST00000421378 PPP1R17O96001 155 aa12.1□□□□□ -0.47
LINC00271-201ENST00000421378 RPS10P46783 165 aaKnown RBP12.1□□□□□ -0.47
LINC00271-201ENST00000421378 LINC00476Q8WZB0 136 aa12.1□□□□□ -0.47
LINC00271-201ENST00000421378 YPEL4Q96NS1 127 aa12.1□□□□□ -0.47
LINC00271-201ENST00000421378 GTSF1LQ9H1H1 148 aa12.1□□□□□ -0.47
LINC00271-201ENST00000421378 LINC00588Q9Y4M8 146 aa12.1□□□□□ -0.47
LINC00271-201ENST00000421378 PPBPP02775 128 aa12.09□□□□□ -0.47
LINC00271-201ENST00000421378 DAZ4Q86SG3 579 aaKnown RBP12.09□□□□□ -0.47
LINC00271-201ENST00000421378 ORMDL3Q8N138 153 aa12.09□□□□□ -0.47
LINC00271-201ENST00000421378 DAZ3Q9NR90 486 aaKnown RBP12.09□□□□□ -0.47
LINC00271-201ENST00000421378 LY6G6CO95867 125 aa12.09□□□□□ -0.47
LINC00271-201ENST00000421378 MT-ND6P03923 174 aa12.09□□□□□ -0.47
LINC00271-201ENST00000421378 TIRAPP58753 221 aa12.09□□□□□ -0.47
LINC00271-201ENST00000421378 NRACQ8N912 160 aa12.09□□□□□ -0.47
LINC00271-201ENST00000421378 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.48
LINC00271-201ENST00000421378 TRBV6-5A0A0K0K1A5 114 aa12.08□□□□□ -0.48
LINC00271-201ENST00000421378 SDHAF1A6NFY7 115 aa12.07□□□□□ -0.48
LINC00271-201ENST00000421378 APCSP02743 223 aa12.07□□□□□ -0.48
LINC00271-201ENST00000421378 ST20Q9HBF5 79 aa12.07□□□□□ -0.48
LINC00271-201ENST00000421378 MRPS16Q9Y3D3 137 aaKnown RBP12.07□□□□□ -0.48
LINC00271-201ENST00000421378 SCO1O75880 301 aa12.06□□□□□ -0.48
LINC00271-201ENST00000421378 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
LINC00271-201ENST00000421378 SUMO2P61956 95 aaKnown RBP12.05□□□□□ -0.48
LINC00271-201ENST00000421378 LELP1Q5T871 98 aa12.05□□□□□ -0.48
LINC00271-201ENST00000421378 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
LINC00271-201ENST00000421378 UPK3BQ9BT76 320 aa12.05□□□□□ -0.48
LINC00271-201ENST00000421378 TMEM70Q9BUB7 260 aa12.05□□□□□ -0.48
LINC00271-201ENST00000421378 MRPL18Q9H0U6 180 aaKnown RBP12.05□□□□□ -0.48
LINC00271-201ENST00000421378 PHOX2AO14813 284 aa12.05□□□□□ -0.48
LINC00271-201ENST00000421378 NPYP01303 97 aa12.05□□□□□ -0.48
LINC00271-201ENST00000421378 TMEM97Q5BJF2 176 aa12.04□□□□□ -0.48
LINC00271-201ENST00000421378 C20orf78Q9BR46 151 aa12.04□□□□□ -0.48
LINC00271-201ENST00000421378 LAMTOR2Q9Y2Q5 125 aa12.04□□□□□ -0.48
LINC00271-201ENST00000421378 TRAPPC1Q9Y5R8 145 aa12.04□□□□□ -0.48
LINC00271-201ENST00000421378 TRBV6-8A0A0A6YYG3 113 aa12.03□□□□□ -0.48
LINC00271-201ENST00000421378 LCE6AA0A183 80 aa12.03□□□□□ -0.48
LINC00271-201ENST00000421378 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
LINC00271-201ENST00000421378 KIAA1644Q3SXP7 199 aa12.03□□□□□ -0.48
LINC00271-201ENST00000421378 TRAV8-6A0A0B4J262 113 aa12.02□□□□□ -0.49
LINC00271-201ENST00000421378 TRBV27A0A0K0K1C4 114 aa12.02□□□□□ -0.49
LINC00271-201ENST00000421378 I3L3M4 83 aa12.02□□□□□ -0.49
LINC00271-201ENST00000421378 POLR2KP53803 58 aaKnown RBP12.02□□□□□ -0.49
LINC00271-201ENST00000421378 COTL1Q14019 142 aa12.02□□□□□ -0.49
LINC00271-201ENST00000421378 ALMS1Q8TCU4 4167 aa12.02□□□□□ -0.49
LINC00271-201ENST00000421378 NTM-AS1Q6ZSK4 140 aa12.01□□□□□ -0.49
LINC00271-201ENST00000421378 WFDC10BQ8IUB3 73 aa12.01□□□□□ -0.49
LINC00271-201ENST00000421378 DEFB104AQ8WTQ1 72 aa12.01□□□□□ -0.49
LINC00271-201ENST00000421378 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
LINC00271-201ENST00000421378 VCYO14598 125 aa12.01□□□□□ -0.49
LINC00271-201ENST00000421378 PMCHP20382 165 aa12.01□□□□□ -0.49
LINC00271-201ENST00000421378 Q9H8V8 135 aa12.01□□□□□ -0.49
LINC00271-201ENST00000421378 COLCA2A8K830 154 aa12□□□□□ -0.49
LINC00271-201ENST00000421378 SIVA1O15304 175 aa12□□□□□ -0.49
LINC00271-201ENST00000421378 RPL32P62910 135 aaKnown RBP12□□□□□ -0.49
LINC00271-201ENST00000421378 KIR2DL4Q99706 377 aa12□□□□□ -0.49
LINC00271-201ENST00000421378 SMIM2Q9BVW6 85 aa12□□□□□ -0.49
LINC00271-201ENST00000421378 MAP1LC3AQ9H492 121 aa12□□□□□ -0.49
LINC00271-201ENST00000421378 IGHV1-24A0A0C4DH33 117 aa11.99□□□□□ -0.49
LINC00271-201ENST00000421378 IQCJQ1A5X6 159 aa11.99□□□□□ -0.49
LINC00271-201ENST00000421378 VPS13DQ5THJ4 4388 aa11.99□□□□□ -0.49
LINC00271-201ENST00000421378 DNAH1Q9P2D7 4330 aa11.98□□□□□ -0.49
LINC00271-201ENST00000421378 AMTP48728 403 aa11.98□□□□□ -0.49
LINC00271-201ENST00000421378 ALKBH7Q9BT30 221 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms