RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CFAP126Q5VTH2 177 aa9.61□□□□□ -0.87
LINC00642-201ENST00000419459 DNHD1Q96M86 4753 aa9.61□□□□□ -0.87
LINC00642-201ENST00000419459 IGHV4-4A0A075B6R2 117 aa9.61□□□□□ -0.87
LINC00642-201ENST00000419459 PRB4P10163 310 aaPredicted RBP9.61□□□□□ -0.87
LINC00642-201ENST00000419459 NRACQ8N912 160 aa9.61□□□□□ -0.87
LINC00642-201ENST00000419459 Q8TAT8 98 aa9.61□□□□□ -0.87
LINC00642-201ENST00000419459 RHPN1-AS1Q9BWJ2 59 aa9.61□□□□□ -0.87
LINC00642-201ENST00000419459 IGHV7-4-1A0A0J9YVY3 117 aa9.6□□□□□ -0.87
LINC00642-201ENST00000419459 AMTNQ6UX39 209 aa9.6□□□□□ -0.87
LINC00642-201ENST00000419459 GEMIN7Q9H840 131 aaKnown RBP9.6□□□□□ -0.87
LINC00642-201ENST00000419459 UFC1Q9Y3C8 167 aa9.6□□□□□ -0.87
LINC00642-201ENST00000419459 LGALS9O00182 355 aa9.6□□□□□ -0.87
LINC00642-201ENST00000419459 OVOL1O14753 267 aa9.6□□□□□ -0.87
LINC00642-201ENST00000419459 GAS8-AS1O95177 125 aa9.6□□□□□ -0.87
LINC00642-201ENST00000419459 CRYBA4P53673 196 aa9.6□□□□□ -0.87
LINC00642-201ENST00000419459 MORN3Q6PF18 240 aaPredicted RBP9.6□□□□□ -0.87
LINC00642-201ENST00000419459 RPL11P62913 178 aaKnown RBP9.59□□□□□ -0.87
LINC00642-201ENST00000419459 ORMDL2Q53FV1 153 aa9.59□□□□□ -0.87
LINC00642-201ENST00000419459 LINC00482Q8N8I6 264 aa9.59□□□□□ -0.87
LINC00642-201ENST00000419459 SYT8Q8NBV8 401 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 SLC50A1Q9BRV3 221 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 PEMTQ9UBM1 199 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 U3KQE9 123 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 NOTCH1P46531 2555 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 TRAV26-1A0A087WT03 109 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 K7EMT4 169 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 GATA1P15976 413 aaPredicted RBP9.58□□□□□ -0.88
LINC00642-201ENST00000419459 SHISA2Q6UWI4 295 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 CDIP1Q9H305 208 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 SMAD5-AS1Q9Y6J3 95 aa9.58□□□□□ -0.88
LINC00642-201ENST00000419459 SPINK8P0C7L1 97 aa9.57□□□□□ -0.88
LINC00642-201ENST00000419459 INSL3P51460 131 aa9.57□□□□□ -0.88
LINC00642-201ENST00000419459 UBE2D1P51668 147 aa9.57□□□□□ -0.88
LINC00642-201ENST00000419459 GLMPQ8WWB7 406 aa9.57□□□□□ -0.88
LINC00642-201ENST00000419459 PPDPFLQ8WWR9 84 aa9.57□□□□□ -0.88
LINC00642-201ENST00000419459 MRPL53Q96EL3 112 aaKnown RBP9.57□□□□□ -0.88
LINC00642-201ENST00000419459 C20orf78Q9BR46 151 aa9.57□□□□□ -0.88
LINC00642-201ENST00000419459 NBEAL1Q6ZS30 2694 aa9.57□□□□□ -0.88
LINC00642-201ENST00000419459 TRBV20-1A0A075B6N2 111 aa9.56□□□□□ -0.88
LINC00642-201ENST00000419459 UBE2D3P61077 147 aa9.56□□□□□ -0.88
LINC00642-201ENST00000419459 UBE2D2P62837 147 aa9.56□□□□□ -0.88
LINC00642-201ENST00000419459 IGFL4Q6B9Z1 124 aa9.56□□□□□ -0.88
LINC00642-201ENST00000419459 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
LINC00642-201ENST00000419459 SMIM2Q9BVW6 85 aa9.56□□□□□ -0.88
LINC00642-201ENST00000419459 MGAM2Q2M2H8 2515 aa9.56□□□□□ -0.88
LINC00642-201ENST00000419459 IGKV3D-20A0A0C4DH25 116 aa9.56□□□□□ -0.88
LINC00642-201ENST00000419459 TEN1Q86WV5 123 aa9.56□□□□□ -0.88
LINC00642-201ENST00000419459 NEXN-AS1Q8NBZ9 246 aa9.56□□□□□ -0.88
LINC00642-201ENST00000419459 LINC01549A6NIU2 74 aa9.55□□□□□ -0.88
LINC00642-201ENST00000419459 SMCPP49901 116 aaPredicted RBP9.55□□□□□ -0.88
LINC00642-201ENST00000419459 TMEM78Q5T7P6 136 aa9.55□□□□□ -0.88
LINC00642-201ENST00000419459 Q6ZUT4 128 aa9.55□□□□□ -0.88
LINC00642-201ENST00000419459 TSPAN13O95857 204 aa9.55□□□□□ -0.88
LINC00642-201ENST00000419459 TMEM61Q8N0U2 210 aa9.55□□□□□ -0.88
LINC00642-201ENST00000419459 DYNLRB2Q8TF09 96 aa9.55□□□□□ -0.88
LINC00642-201ENST00000419459 AGRNO00468 2067 aa9.54□□□□□ -0.88
LINC00642-201ENST00000419459 TMEM262E9PQX1 116 aa9.54□□□□□ -0.88
LINC00642-201ENST00000419459 ERCC8Q13216 396 aa9.54□□□□□ -0.88
LINC00642-201ENST00000419459 SBSPONQ8IVN8 264 aa9.54□□□□□ -0.88
LINC00642-201ENST00000419459 SCGB3A1Q96QR1 104 aa9.54□□□□□ -0.88
LINC00642-201ENST00000419459 M0QXV9 152 aa9.53□□□□□ -0.88
LINC00642-201ENST00000419459 HLA-DMBP28068 263 aa9.53□□□□□ -0.88
LINC00642-201ENST00000419459 PAPPA-AS1Q5QFB9 102 aa9.53□□□□□ -0.88
LINC00642-201ENST00000419459 RNF182Q8N6D2 247 aa9.53□□□□□ -0.88
LINC00642-201ENST00000419459 ERG28Q9UKR5 140 aa9.53□□□□□ -0.88
LINC00642-201ENST00000419459 DEFB114Q30KQ6 69 aa9.53□□□□□ -0.88
LINC00642-201ENST00000419459 SPANXN1Q5VSR9 72 aa9.53□□□□□ -0.88
LINC00642-201ENST00000419459 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.53□□□□□ -0.88
LINC00642-201ENST00000419459 NFE4Q86UQ8 179 aa9.53□□□□□ -0.88
LINC00642-201ENST00000419459 PRADC1Q9BSG0 188 aa9.53□□□□□ -0.88
LINC00642-201ENST00000419459 ZNF815PA8K554 130 aa9.52□□□□□ -0.89
LINC00642-201ENST00000419459 M0R381 172 aa9.52□□□□□ -0.89
LINC00642-201ENST00000419459 PPP1R17O96001 155 aa9.52□□□□□ -0.89
LINC00642-201ENST00000419459 SUMO2P61956 95 aaKnown RBP9.52□□□□□ -0.89
LINC00642-201ENST00000419459 LENEPQ9Y5L5 61 aa9.52□□□□□ -0.89
LINC00642-201ENST00000419459 CD7P09564 240 aa9.51□□□□□ -0.89
LINC00642-201ENST00000419459 DEFB1P60022 68 aa9.51□□□□□ -0.89
LINC00642-201ENST00000419459 SCGB1D4Q6XE38 83 aa9.51□□□□□ -0.89
LINC00642-201ENST00000419459 C9orf47Q6ZRZ4 202 aa9.51□□□□□ -0.89
LINC00642-201ENST00000419459 AGPAT4-IT1Q9H0P7 198 aa9.51□□□□□ -0.89
LINC00642-201ENST00000419459 C11orf21Q9P2W6 132 aa9.51□□□□□ -0.89
LINC00642-201ENST00000419459 PRAC2D3DTV9 90 aa9.51□□□□□ -0.89
LINC00642-201ENST00000419459 PSMB2P49721 201 aa9.51□□□□□ -0.89
LINC00642-201ENST00000419459 XGP55808 180 aa9.51□□□□□ -0.89
LINC00642-201ENST00000419459 SRSF9Q13242 221 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00642-201ENST00000419459 DCANP1Q8TF63 244 aa9.51□□□□□ -0.89
LINC00642-201ENST00000419459 TRAV26-2A0A0B4J265 109 aa9.5□□□□□ -0.89
LINC00642-201ENST00000419459 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
LINC00642-201ENST00000419459 A8MWV9 139 aa9.5□□□□□ -0.89
LINC00642-201ENST00000419459 MT-ATP8P03928 68 aa9.5□□□□□ -0.89
LINC00642-201ENST00000419459 ZNF688P0C7X2 276 aa9.5□□□□□ -0.89
LINC00642-201ENST00000419459 HERVK_113P61574 105 aa9.5□□□□□ -0.89
LINC00642-201ENST00000419459 OXLD1Q5BKU9 147 aa9.5□□□□□ -0.89
LINC00642-201ENST00000419459 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
LINC00642-201ENST00000419459 BAALCQ8WXS3 180 aa9.5□□□□□ -0.89
LINC00642-201ENST00000419459 IGLV1-51P01701 117 aa9.49□□□□□ -0.89
LINC00642-201ENST00000419459 TRAV8-2A0A0B4J237 113 aa9.49□□□□□ -0.89
LINC00642-201ENST00000419459 SOCS3O14543 225 aa9.49□□□□□ -0.89
LINC00642-201ENST00000419459 MED14OSP0DP75 135 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms