RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 E9PLD3 99 aa9.93□□□□□ -0.82
TNFRSF8-203ENST00000417814 DEFB131AP59861 70 aa9.93□□□□□ -0.82
TNFRSF8-203ENST00000417814 Q6ZSV7 163 aa9.93□□□□□ -0.82
TNFRSF8-203ENST00000417814 C18orf65Q6ZTR6 163 aa9.93□□□□□ -0.82
TNFRSF8-203ENST00000417814 APRG1Q8IVJ8 170 aa9.93□□□□□ -0.82
TNFRSF8-203ENST00000417814 DAZ1Q9NQZ3 744 aaKnown RBP9.93□□□□□ -0.82
TNFRSF8-203ENST00000417814 CFHR3Q02985 330 aa9.92□□□□□ -0.82
TNFRSF8-203ENST00000417814 RRN3P1Q2M238 152 aa9.92□□□□□ -0.82
TNFRSF8-203ENST00000417814 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
TNFRSF8-203ENST00000417814 TRBV6-1A0A0K0K1D8 114 aa9.92□□□□□ -0.82
TNFRSF8-203ENST00000417814 C9JAW5 83 aa9.92□□□□□ -0.82
TNFRSF8-203ENST00000417814 RNASE3P12724 160 aaKnown RBP9.92□□□□□ -0.82
TNFRSF8-203ENST00000417814 ID1P41134 155 aa9.92□□□□□ -0.82
TNFRSF8-203ENST00000417814 HERV-K104P63124 156 aa9.92□□□□□ -0.82
TNFRSF8-203ENST00000417814 FOXI1Q12951 378 aa9.92□□□□□ -0.82
TNFRSF8-203ENST00000417814 SHISA2Q6UWI4 295 aa9.92□□□□□ -0.82
TNFRSF8-203ENST00000417814 NBL1P41271 181 aa9.91□□□□□ -0.82
TNFRSF8-203ENST00000417814 DEFB112Q30KQ8 113 aa9.91□□□□□ -0.82
TNFRSF8-203ENST00000417814 VCX2Q9H322 139 aa9.91□□□□□ -0.82
TNFRSF8-203ENST00000417814 XGP55808 180 aa9.91□□□□□ -0.82
TNFRSF8-203ENST00000417814 GPHB5Q86YW7 130 aa9.91□□□□□ -0.82
TNFRSF8-203ENST00000417814 TEX29Q8N6K0 151 aa9.91□□□□□ -0.82
TNFRSF8-203ENST00000417814 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF8-203ENST00000417814 IGKV2-29A2NJV5 120 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF8-203ENST00000417814 OVOL1O14753 267 aa9.91□□□□□ -0.82
TNFRSF8-203ENST00000417814 C9orf47Q6ZRZ4 202 aa9.91□□□□□ -0.82
TNFRSF8-203ENST00000417814 IGLV2-18A0A075B6J9 118 aa9.9□□□□□ -0.82
TNFRSF8-203ENST00000417814 TRBV20-1A0A075B6N2 111 aa9.9□□□□□ -0.82
TNFRSF8-203ENST00000417814 RNF223E7ERA6 249 aa9.9□□□□□ -0.82
TNFRSF8-203ENST00000417814 Q6ZUT4 128 aa9.9□□□□□ -0.82
TNFRSF8-203ENST00000417814 OOSP1A8MZH6 123 aa9.9□□□□□ -0.82
TNFRSF8-203ENST00000417814 CD28P10747 220 aa9.9□□□□□ -0.82
TNFRSF8-203ENST00000417814 XCL2Q9UBD3 114 aa9.9□□□□□ -0.82
TNFRSF8-203ENST00000417814 TSPEAR-AS2P59090 65 aa9.89□□□□□ -0.83
TNFRSF8-203ENST00000417814 SNRPD3P62318 126 aaKnown RBP9.89□□□□□ -0.83
TNFRSF8-203ENST00000417814 GAGE5Q13069 117 aa9.89□□□□□ -0.83
TNFRSF8-203ENST00000417814 GAGE6Q13070 117 aa9.89□□□□□ -0.83
TNFRSF8-203ENST00000417814 ZFAND6Q6FIF0 208 aa9.89□□□□□ -0.83
TNFRSF8-203ENST00000417814 SLURP1P55000 103 aa9.89□□□□□ -0.83
TNFRSF8-203ENST00000417814 LINC01587Q99440 93 aa9.89□□□□□ -0.83
TNFRSF8-203ENST00000417814 C1QTNF4Q9BXJ3 329 aa9.89□□□□□ -0.83
TNFRSF8-203ENST00000417814 PIFOQ8TCI5 191 aa9.88□□□□□ -0.83
TNFRSF8-203ENST00000417814 A4D1N5 150 aa9.88□□□□□ -0.83
TNFRSF8-203ENST00000417814 C3orf56Q8N813 242 aa9.88□□□□□ -0.83
TNFRSF8-203ENST00000417814 FLNBO75369 2602 aaKnown RBP9.88□□□□□ -0.83
TNFRSF8-203ENST00000417814 A6NJY4 79 aa9.88□□□□□ -0.83
TNFRSF8-203ENST00000417814 ERG28Q9UKR5 140 aa9.88□□□□□ -0.83
TNFRSF8-203ENST00000417814 VCYO14598 125 aa9.87□□□□□ -0.83
TNFRSF8-203ENST00000417814 J3QQQ9 107 aa9.87□□□□□ -0.83
TNFRSF8-203ENST00000417814 NDUFA4O00483 81 aa9.87□□□□□ -0.83
TNFRSF8-203ENST00000417814 PMVKQ15126 192 aa9.87□□□□□ -0.83
TNFRSF8-203ENST00000417814 NEXN-AS1Q8NBZ9 246 aa9.87□□□□□ -0.83
TNFRSF8-203ENST00000417814 DLX4Q92988 240 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF8-203ENST00000417814 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
TNFRSF8-203ENST00000417814 TNFRSF18Q9Y5U5 241 aa9.87□□□□□ -0.83
TNFRSF8-203ENST00000417814 MSMBP08118 114 aa9.86□□□□□ -0.83
TNFRSF8-203ENST00000417814 EBI3Q14213 229 aa9.86□□□□□ -0.83
TNFRSF8-203ENST00000417814 ZNRF2Q8NHG8 242 aa9.86□□□□□ -0.83
TNFRSF8-203ENST00000417814 CDIP1Q9H305 208 aa9.86□□□□□ -0.83
TNFRSF8-203ENST00000417814 TRAV13-1A0A0B4J241 112 aa9.86□□□□□ -0.83
TNFRSF8-203ENST00000417814 TSPAN13O95857 204 aa9.86□□□□□ -0.83
TNFRSF8-203ENST00000417814 CRIP2P52943 208 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF8-203ENST00000417814 TOMM6Q96B49 74 aa9.86□□□□□ -0.83
TNFRSF8-203ENST00000417814 TM2D2Q9BX73 214 aa9.86□□□□□ -0.83
TNFRSF8-203ENST00000417814 C11orf68Q9H3H3 251 aaKnown RBP9.86□□□□□ -0.83
TNFRSF8-203ENST00000417814 TTC32Q5I0X7 151 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 HIST2H2BCQ6DN03 193 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 NFE4Q86UQ8 179 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 DYNLRB2Q8TF09 96 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 TOMM7Q9P0U1 55 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 TCL1BO95988 128 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 MUSTN1Q8IVN3 82 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 IGHV4OR15-8A0A075B7B6 117 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 A0A087WW49 117 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 FAM223BA6NKX1 122 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 FAM223AQ8IWN6 122 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 TMEM190Q8WZ59 177 aa9.85□□□□□ -0.83
TNFRSF8-203ENST00000417814 UCNP55089 124 aa9.84□□□□□ -0.83
TNFRSF8-203ENST00000417814 TRBV7-9A0A0J9YWB2 115 aa9.84□□□□□ -0.83
TNFRSF8-203ENST00000417814 MORN3Q6PF18 240 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF8-203ENST00000417814 UBR5O95071 2799 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF8-203ENST00000417814 RS1O15537 224 aa9.84□□□□□ -0.83
TNFRSF8-203ENST00000417814 TSHBP01222 138 aa9.84□□□□□ -0.83
TNFRSF8-203ENST00000417814 FBXL19-AS1Q494R0 122 aa9.84□□□□□ -0.83
TNFRSF8-203ENST00000417814 SNCGO76070 127 aa9.83□□□□□ -0.84
TNFRSF8-203ENST00000417814 NDUFA7O95182 113 aa9.83□□□□□ -0.84
TNFRSF8-203ENST00000417814 GAGE2BQ13066 116 aa9.83□□□□□ -0.84
TNFRSF8-203ENST00000417814 GAGE2EQ4V326 116 aa9.83□□□□□ -0.84
TNFRSF8-203ENST00000417814 CNFNQ9BYD5 112 aa9.83□□□□□ -0.84
TNFRSF8-203ENST00000417814 GAGE2DQ9UEU5 116 aa9.83□□□□□ -0.84
TNFRSF8-203ENST00000417814 CRYGDP07320 174 aa9.83□□□□□ -0.84
TNFRSF8-203ENST00000417814 FHL3Q13643 280 aa9.83□□□□□ -0.84
TNFRSF8-203ENST00000417814 ZMAT4Q9H898 229 aa9.83□□□□□ -0.84
TNFRSF8-203ENST00000417814 ITPR2Q14571 2701 aa9.83□□□□□ -0.84
TNFRSF8-203ENST00000417814 TRBV7-3A0A075B6L6 115 aa9.82□□□□□ -0.84
TNFRSF8-203ENST00000417814 A8MWV9 139 aa9.82□□□□□ -0.84
TNFRSF8-203ENST00000417814 HOXD3P31249 432 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF8-203ENST00000417814 PPDPFLQ8WWR9 84 aa9.82□□□□□ -0.84
TNFRSF8-203ENST00000417814 IGHV1OR15-1A0A075B7D0 117 aa9.82□□□□□ -0.84
TNFRSF8-203ENST00000417814 NTN5Q8WTR8 489 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms