RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	ANAPC16	Q96DE5	110 aa		11.17	□□□□□ -0.62
DDR1-231	ENST00000417521	KIF25-AS1	Q9Y6Z4	181 aa		11.17	□□□□□ -0.62
DDR1-231	ENST00000417521	TRAV9-2	A0A087WT02	112 aa		11.16	□□□□□ -0.62
DDR1-231	ENST00000417521		A0A1B0GUT8	65 aa		11.16	□□□□□ -0.62
DDR1-231	ENST00000417521	LINC00315	P59091	139 aa		11.16	□□□□□ -0.62
DDR1-231	ENST00000417521	BORCS7	Q96B45	105 aa		11.16	□□□□□ -0.62
DDR1-231	ENST00000417521	APOC3	P02656	99 aa		11.15	□□□□□ -0.62
DDR1-231	ENST00000417521	CLRN3	Q8NCR9	226 aa		11.15	□□□□□ -0.62
DDR1-231	ENST00000417521	C7orf77	A4D0Y5	90 aa		11.14	□□□□□ -0.63
DDR1-231	ENST00000417521	TRGC1	P0CF51	173 aa		11.14	□□□□□ -0.63
DDR1-231	ENST00000417521	SMIM17	P0DL12	118 aa		11.14	□□□□□ -0.63
DDR1-231	ENST00000417521	ZNF56	Q15929	161 aa		11.14	□□□□□ -0.63
DDR1-231	ENST00000417521	WFDC10B	Q8IUB3	73 aa		11.14	□□□□□ -0.63
DDR1-231	ENST00000417521		Q9UF83	564 aa		11.14	□□□□□ -0.63
DDR1-231	ENST00000417521	MGP	P08493	103 aa		11.13	□□□□□ -0.63
DDR1-231	ENST00000417521	DNAH10OS	P0CZ25	163 aa		11.13	□□□□□ -0.63
DDR1-231	ENST00000417521		F5H697	171 aa		11.12	□□□□□ -0.63
DDR1-231	ENST00000417521		Q6ZRN7	208 aa	Predicted RBP	11.12	□□□□□ -0.63
DDR1-231	ENST00000417521	DPH3P1	Q9H4G8	78 aa		11.12	□□□□□ -0.63
DDR1-231	ENST00000417521	RAB4B	P61018	213 aa		11.12	□□□□□ -0.63
DDR1-231	ENST00000417521	RIG	Q13278	110 aa		11.12	□□□□□ -0.63
DDR1-231	ENST00000417521	NFE4	Q86UQ8	179 aa		11.12	□□□□□ -0.63
DDR1-231	ENST00000417521	CTDSP1	Q9GZU7	261 aa		11.12	□□□□□ -0.63
DDR1-231	ENST00000417521	RHEB	Q15382	184 aa		11.11	□□□□□ -0.63
DDR1-231	ENST00000417521	MRPL54	Q6P161	138 aa	Known RBP	11.11	□□□□□ -0.63
DDR1-231	ENST00000417521	SVBP	Q8N300	66 aa		11.11	□□□□□ -0.63
DDR1-231	ENST00000417521	ATP6V0E2	Q8NHE4	81 aa		11.11	□□□□□ -0.63
DDR1-231	ENST00000417521	RPS10P5	Q9NQ39	176 aa		11.11	□□□□□ -0.63
DDR1-231	ENST00000417521	C16orf90	A8MZG2	172 aa		11.1	□□□□□ -0.63
DDR1-231	ENST00000417521	CAMP	P49913	170 aa		11.1	□□□□□ -0.63
DDR1-231	ENST00000417521	SUMO4	Q6EEV6	95 aa		11.1	□□□□□ -0.63
DDR1-231	ENST00000417521	SMIM15	Q7Z3B0	74 aa		11.1	□□□□□ -0.63
DDR1-231	ENST00000417521	C10orf126	Q8N4M7	172 aa		11.1	□□□□□ -0.63
DDR1-231	ENST00000417521	GTSF1L	Q9H1H1	148 aa		11.1	□□□□□ -0.63
DDR1-231	ENST00000417521		A0A087WWC5	75 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	TRAV8-6	A0A0B4J262	113 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	IGHV3-38	A0A0C4DH36	116 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	GAGE12J	A6NER3	117 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	SNAPIN	O95295	136 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	GAGE1	Q13065	139 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	GAGE4	Q13068	117 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	GAGE5	Q13069	117 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	GAGE13	Q4V321	117 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	LELP1	Q5T871	98 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	TNFRSF18	Q9Y5U5	241 aa		11.09	□□□□□ -0.63
DDR1-231	ENST00000417521	TRAV26-2	A0A0B4J265	109 aa		11.08	□□□□□ -0.64
DDR1-231	ENST00000417521		A0A1B0GXF2	115 aa		11.08	□□□□□ -0.64
DDR1-231	ENST00000417521	LINC01556	Q5JQF7	62 aa		11.08	□□□□□ -0.64
DDR1-231	ENST00000417521	SPATA12	Q7Z6I5	190 aa		11.08	□□□□□ -0.64
DDR1-231	ENST00000417521	IMMP2L	Q96T52	175 aa		11.08	□□□□□ -0.64
DDR1-231	ENST00000417521	TMEM191A	Q9H0A3	160 aa		11.08	□□□□□ -0.64
DDR1-231	ENST00000417521	LRP1B	Q9NZR2	4599 aa		11.08	□□□□□ -0.64
DDR1-231	ENST00000417521		M0QY20	66 aa		11.07	□□□□□ -0.64
DDR1-231	ENST00000417521	LINC00694	P0DN24	101 aa		11.07	□□□□□ -0.64
DDR1-231	ENST00000417521	OR10J3	Q5JRS4	329 aa		11.07	□□□□□ -0.64
DDR1-231	ENST00000417521	TMEM242	Q9NWH2	141 aa		11.07	□□□□□ -0.64
DDR1-231	ENST00000417521	HBB	P68871	147 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	ATRAID	Q6UW56	229 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	AMN1	Q8IY45	258 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	URGCP-MRPS24	S4R325	110 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	TRBV10-1	A0A0K0K1A3	114 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521		A0A1B0GW15	77 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	KCNIP4	Q6PIL6	250 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	ATP5L2	Q7Z4Y8	100 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	GATD1	Q8NB37	220 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	NEXN-AS1	Q8NBZ9	246 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	RNF185	Q96GF1	192 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	BTF3L4	Q96K17	158 aa		11.06	□□□□□ -0.64
DDR1-231	ENST00000417521	RAB4A	P20338	218 aa		11.05	□□□□□ -0.64
DDR1-231	ENST00000417521	KRTAP10-2	P60368	255 aa		11.05	□□□□□ -0.64
DDR1-231	ENST00000417521	ABCA13	Q86UQ4	5058 aa		11.04	□□□□□ -0.64
DDR1-231	ENST00000417521	EREG	O14944	169 aa		11.04	□□□□□ -0.64
DDR1-231	ENST00000417521	GAS8-AS1	O95177	125 aa		11.04	□□□□□ -0.64
DDR1-231	ENST00000417521	S100A8	P05109	93 aa		11.04	□□□□□ -0.64
DDR1-231	ENST00000417521	S100P	P25815	95 aa		11.04	□□□□□ -0.64
DDR1-231	ENST00000417521	RPL36A	P83881	106 aa	Known RBP	11.04	□□□□□ -0.64
DDR1-231	ENST00000417521	RASL11A	Q6T310	242 aa		11.04	□□□□□ -0.64
DDR1-231	ENST00000417521	RPL36AL	Q969Q0	106 aa	Known RBP	11.04	□□□□□ -0.64
DDR1-231	ENST00000417521	TRBV7-3	A0A075B6L6	115 aa		11.03	□□□□□ -0.64
DDR1-231	ENST00000417521	IBA57-AS1	B1ANH7	110 aa		11.03	□□□□□ -0.64
DDR1-231	ENST00000417521		H7C1H1	209 aa		11.03	□□□□□ -0.64
DDR1-231	ENST00000417521	FAM104B	Q5XKR9	115 aa		11.03	□□□□□ -0.64
DDR1-231	ENST00000417521	PGPEP1	Q9NXJ5	209 aa		11.03	□□□□□ -0.64
DDR1-231	ENST00000417521	DNAH5	Q8TE73	4624 aa		11.03	□□□□□ -0.64
DDR1-231	ENST00000417521	CDK2AP2	O75956	126 aa		11.02	□□□□□ -0.65
DDR1-231	ENST00000417521	UBE2D3	P61077	147 aa		11.02	□□□□□ -0.65
DDR1-231	ENST00000417521	UBE2D2	P62837	147 aa		11.02	□□□□□ -0.65
DDR1-231	ENST00000417521	RPL39L	Q96EH5	51 aa	Known RBP	11.02	□□□□□ -0.65
DDR1-231	ENST00000417521	TRAV9-1	A0A075B6T8	112 aa		11.01	□□□□□ -0.65
DDR1-231	ENST00000417521	SMKR1	H3BMG3	65 aa		11.01	□□□□□ -0.65
DDR1-231	ENST00000417521	NCR2	O95944	276 aa		11.01	□□□□□ -0.65
DDR1-231	ENST00000417521	MRPL51	Q4U2R6	128 aa	Known RBP	11.01	□□□□□ -0.65
DDR1-231	ENST00000417521	NIT2	Q9NQR4	276 aa		11.01	□□□□□ -0.65
DDR1-231	ENST00000417521		A0A087WTM6	91 aa		11	□□□□□ -0.65
DDR1-231	ENST00000417521	MRAP2	Q96G30	205 aa		11	□□□□□ -0.65
DDR1-231	ENST00000417521	DNAJC30	Q96LL9	226 aa		11	□□□□□ -0.65
DDR1-231	ENST00000417521	IGHV3-30	P01768	117 aa		11	□□□□□ -0.65
DDR1-231	ENST00000417521	IGHV3-33	P01772	117 aa		11	□□□□□ -0.65
DDR1-231	ENST00000417521	IGHV3-30-3	P0DP02	117 aa		11	□□□□□ -0.65
DDR1-231	ENST00000417521	IGHV3-30-5	P0DP03	117 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 295.7 ms