RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 PARP4Q9UKK3 1724 aaKnown RBP3.59□□□□□ -1.83
TTC39DP-201ENST00000416781 IGKV2D-26A0A0A0MRZ7 120 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 C17orf51A8MQB3 221 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 C5orf67F2Z3F1 127 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 MIAQ16674 131 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 C15orf32Q32M92 178 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 IFI27L1Q96BM0 104 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 COL11A1P12107 1806 aaPredicted RBP3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 ABCA7Q8IZY2 2146 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 TRBV7-3A0A075B6L6 115 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 A0A0B4J2C4 111 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 LOC107984156A0A0G2JMH3 177 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 hDV103S1A0JD37 113 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 A8MWP4 228 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 HCG22E2RYF7 251 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 HMGN2P05204 90 aaKnown RBP3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 ROMO1P60602 79 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 NDUFA11Q86Y39 141 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 ARL17AQ8IVW1 177 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 C20orf203Q8NBC4 194 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 LINC00467Q9BRT7 94 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 SHROOM3Q8TF72 1996 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 SPTBP11277 2137 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 BRWD3Q6RI45 1802 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 LTBP4Q8N2S1 1624 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 NRXN3Q9Y4C0 1643 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 IGHV3-66A0A0C4DH42 116 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 A0A1B0GWA3 101 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 FAM223BA6NKX1 122 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 K7ERS5 55 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 LECT2O14960 151 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 ZNF117Q03924 483 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 C9orf116Q5BN46 136 aaPredicted RBP3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 ZNF826PQ6ZT77 177 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 FAM167A-AS1Q96KT0 104 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 SMIM7Q9BQ49 75 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 CHCHD7Q9BUK0 85 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 PROK2Q9HC23 129 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 CDC42SE1Q9NRR8 79 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 MDC1Q14676 2089 aaKnown RBP3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 SAMD9LQ8IVG5 1584 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 COL2A1P02458 1487 aaPredicted RBP3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 SHPRHQ149N8 1683 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 IGHV3-49A0A0A0MS15 119 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 LY6HO94772 140 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 CAMK2N1Q7Z7J9 78 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 C20orf197Q8N268 126 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 ABRACLQ9P1F3 81 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 SDK2Q58EX2 2172 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 KIAA0100Q14667 2235 aaKnown RBP3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 TRAV7A0A075B6U4 112 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 IGLV3-32A0A0A0MS00 114 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 TRAV22A0A0B4J277 110 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 IGHV5-10-1A0A0J9YXX1 117 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 TRBV10-2A0A0K0K1G8 114 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 E7EUB6 86 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 PRH1P02810 166 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 MIFP14174 115 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 SSBP1Q04837 148 aaKnown RBP3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 C1orf134Q5TEV5 83 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 Q6JHZ5 121 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 DYNAPQ8N1N2 210 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 Q8N377 158 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 Q8N6K4 173 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 GNG13Q9P2W3 67 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 PRO1854Q9UHT4 67 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 TRBV25-1A0A075B6N4 114 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 TMSB15BA0A087X1C1 80 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 CYSRT1A8MQ03 144 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 BPY2O14599 106 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 IGKV1D-33P01593 117 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 IGKV1-33P01594 117 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 MSMBP08118 114 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 RPL28P46779 137 aaKnown RBP3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 Q5VV11 94 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 SPTSSBQ8NFR3 76 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 SIP14410 1827 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 LRP5O75197 1615 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 TEX49A0A1B0GTD5 131 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 A0A1B0GVX0 72 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 A6NED7 52 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 F8WEM9 126 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 SH2D1AO60880 128 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 ZNF22P17026 224 aaPredicted RBP3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 LTBP1Q14766 1721 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 DDX60LQ5H9U9 1706 aaKnown RBP3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 ZFHX3Q15911 3703 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 MALRD1Q5VYJ5 2156 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 TMEM30CPA0ZSE6 113 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 TRGV3P03979 118 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 CLPSP04118 112 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 IGHV1-8P0DP01 117 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 ZCCHC23Q6ZST2 131 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 CLECL1Q8IZS7 167 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 C15orf56Q8N910 161 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 CEBPZOSA8MTT3 80 aa3.52□□□□□ -1.85
TTC39DP-201ENST00000416781 H3BVH4 76 aa3.52□□□□□ -1.85
TTC39DP-201ENST00000416781 LEPROTL1O95214 131 aa3.52□□□□□ -1.85
TTC39DP-201ENST00000416781 IFI27P40305 119 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms