RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 IGLV10-54A0A075B6I4 117 aa6.39□□□□□ -1.39
MDC1-202ENST00000416571 TRBV25-1A0A075B6N4 114 aa6.39□□□□□ -1.39
MDC1-202ENST00000416571 CTXND1A0A1B0GTU2 59 aa6.39□□□□□ -1.39
MDC1-202ENST00000416571 DEFA1P59665 94 aa6.39□□□□□ -1.39
MDC1-202ENST00000416571 DEFA3P59666 94 aa6.39□□□□□ -1.39
MDC1-202ENST00000416571 CNBPP62633 177 aaKnown RBP6.39□□□□□ -1.39
MDC1-202ENST00000416571 COX8CQ7Z4L0 72 aa6.39□□□□□ -1.39
MDC1-202ENST00000416571 RNF185Q96GF1 192 aa6.39□□□□□ -1.39
MDC1-202ENST00000416571 AQP10Q96PS8 301 aa6.39□□□□□ -1.39
MDC1-202ENST00000416571 DERL1Q9BUN8 251 aa6.39□□□□□ -1.39
MDC1-202ENST00000416571 ZNF471Q9BX82 626 aaPredicted RBP6.39□□□□□ -1.39
MDC1-202ENST00000416571 A0A087WYN8 130 aa6.38□□□□□ -1.39
MDC1-202ENST00000416571 FAM74A7A6NL05 159 aa6.38□□□□□ -1.39
MDC1-202ENST00000416571 SMIM17P0DL12 118 aa6.38□□□□□ -1.39
MDC1-202ENST00000416571 REG3AQ06141 175 aa6.38□□□□□ -1.39
MDC1-202ENST00000416571 CIRBPQ14011 172 aaKnown RBP6.38□□□□□ -1.39
MDC1-202ENST00000416571 SPANXN1Q5VSR9 72 aa6.38□□□□□ -1.39
MDC1-202ENST00000416571 PRR27Q6MZM9 219 aa6.38□□□□□ -1.39
MDC1-202ENST00000416571 BORCS7-ASMTA0A0B4J1R7 106 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 TRAV8-4A0A0B4J246 113 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 TRBV6-1A0A0K0K1D8 114 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 PHOX2AO14813 284 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 P01737 135 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 CHTF8P0CG12 524 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 AKR1C3P42330 323 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 IFITM3Q01628 133 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 KRTAP26-1Q6PEX3 210 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 NTM-AS1Q6ZSK4 140 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 OR10AG1Q8NH19 301 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 VAX2Q9UIW0 290 aa6.37□□□□□ -1.39
MDC1-202ENST00000416571 IGHV1-24A0A0C4DH33 117 aa6.36□□□□□ -1.39
MDC1-202ENST00000416571 LTAP01374 205 aa6.36□□□□□ -1.39
MDC1-202ENST00000416571 SSTP61278 116 aa6.36□□□□□ -1.39
MDC1-202ENST00000416571 ZNF726P1Q15940 193 aa6.36□□□□□ -1.39
MDC1-202ENST00000416571 AKR1C8PQ5T2L2 129 aa6.36□□□□□ -1.39
MDC1-202ENST00000416571 CST9LP1Q5W188 147 aa6.36□□□□□ -1.39
MDC1-202ENST00000416571 INO80EQ8NBZ0 244 aaPredicted RBP6.36□□□□□ -1.39
MDC1-202ENST00000416571 STOML3Q8TAV4 291 aa6.36□□□□□ -1.39
MDC1-202ENST00000416571 SPACA4Q8TDM5 124 aa6.36□□□□□ -1.39
MDC1-202ENST00000416571 MUC21A0A0G2JKD1 596 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 MUC21A0A140T8X8 626 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 MAP1LC3B2A6NCE7 125 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 GZMBP10144 247 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 RAB5CP51148 216 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 IQCJQ1A5X6 159 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 RPL7L1Q6DKI1 246 aaKnown RBP6.35□□□□□ -1.39
MDC1-202ENST00000416571 WDR73Q6P4I2 378 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 GTSF1Q8WW33 167 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 LINC01600Q96MT4 127 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 TCEAL7Q9BRU2 100 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 MAP1LC3BQ9GZQ8 125 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 KIF25-AS1Q9Y6Z4 181 aa6.35□□□□□ -1.39
MDC1-202ENST00000416571 H7C1H1 209 aa6.34□□□□□ -1.39
MDC1-202ENST00000416571 SNAI2O43623 268 aa6.34□□□□□ -1.39
MDC1-202ENST00000416571 CXCL1P09341 107 aa6.34□□□□□ -1.39
MDC1-202ENST00000416571 PLAC8Q9NZF1 115 aa6.34□□□□□ -1.39
MDC1-202ENST00000416571 UBE2L6O14933 153 aa6.33□□□□□ -1.4
MDC1-202ENST00000416571 MGPP08493 103 aa6.33□□□□□ -1.4
MDC1-202ENST00000416571 OR5AL1P0C617 328 aa6.33□□□□□ -1.4
MDC1-202ENST00000416571 FHITP49789 147 aa6.33□□□□□ -1.4
MDC1-202ENST00000416571 SULT1A2P50226 295 aa6.33□□□□□ -1.4
MDC1-202ENST00000416571 MAJINQ3KP22 176 aa6.33□□□□□ -1.4
MDC1-202ENST00000416571 C20orf203Q8NBC4 194 aa6.33□□□□□ -1.4
MDC1-202ENST00000416571 TMEM243Q9BU79 118 aa6.33□□□□□ -1.4
MDC1-202ENST00000416571 SSBP4Q9BWG4 385 aaPredicted RBP6.33□□□□□ -1.4
MDC1-202ENST00000416571 ALG5Q9Y673 324 aa6.33□□□□□ -1.4
MDC1-202ENST00000416571 IGKV2-24A0A0C4DH68 120 aa6.32□□□□□ -1.4
MDC1-202ENST00000416571 A0A1B0GUV1 79 aa6.32□□□□□ -1.4
MDC1-202ENST00000416571 SLPIP03973 132 aa6.32□□□□□ -1.4
MDC1-202ENST00000416571 S100A9P06702 114 aaKnown RBP6.32□□□□□ -1.4
MDC1-202ENST00000416571 COX6A2Q02221 97 aa6.32□□□□□ -1.4
MDC1-202ENST00000416571 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
MDC1-202ENST00000416571 REG3GQ6UW15 175 aa6.32□□□□□ -1.4
MDC1-202ENST00000416571 MED28Q9H204 178 aa6.32□□□□□ -1.4
MDC1-202ENST00000416571 IGLV4-60A0A075B6I1 120 aa6.31□□□□□ -1.4
MDC1-202ENST00000416571 FXYD6-FXYD2A0A087WZ82 144 aa6.31□□□□□ -1.4
MDC1-202ENST00000416571 A0A0J9YXV3 536 aa6.31□□□□□ -1.4
MDC1-202ENST00000416571 PFDN1O60925 122 aa6.31□□□□□ -1.4
MDC1-202ENST00000416571 NDUFS6O75380 124 aaKnown RBP6.31□□□□□ -1.4
MDC1-202ENST00000416571 RPS10P46783 165 aaKnown RBP6.31□□□□□ -1.4
MDC1-202ENST00000416571 PRR3P79522 188 aaKnown RBP6.31□□□□□ -1.4
MDC1-202ENST00000416571 BAGE2Q86Y30 109 aa6.31□□□□□ -1.4
MDC1-202ENST00000416571 STPG4Q8N801 248 aa6.31□□□□□ -1.4
MDC1-202ENST00000416571 LYPD6BQ8NI32 183 aa6.31□□□□□ -1.4
MDC1-202ENST00000416571 TNXBP22105 4242 aa6.3□□□□□ -1.4
MDC1-202ENST00000416571 IGKV3OR2-268A0A0C4DH90 116 aa6.3□□□□□ -1.4
MDC1-202ENST00000416571 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
MDC1-202ENST00000416571 M0QY20 66 aa6.3□□□□□ -1.4
MDC1-202ENST00000416571 PAGE4O60829 102 aa6.3□□□□□ -1.4
MDC1-202ENST00000416571 NKX2-5P52952 324 aaPredicted RBP6.3□□□□□ -1.4
MDC1-202ENST00000416571 ODF1Q14990 250 aa6.3□□□□□ -1.4
MDC1-202ENST00000416571 PRSS3P2Q8NHM4 247 aa6.3□□□□□ -1.4
MDC1-202ENST00000416571 TPPP3Q9BW30 176 aa6.3□□□□□ -1.4
MDC1-202ENST00000416571 GFRA4Q9GZZ7 299 aa6.3□□□□□ -1.4
MDC1-202ENST00000416571 GIPP09681 153 aaPredicted RBP6.29□□□□□ -1.4
MDC1-202ENST00000416571 AMTP48728 403 aa6.29□□□□□ -1.4
MDC1-202ENST00000416571 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
MDC1-202ENST00000416571 Q5BKY6 102 aa6.29□□□□□ -1.4
MDC1-202ENST00000416571 SUMO4Q6EEV6 95 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms