RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 LEPP41159 167 aa10.65□□□□□ -0.7
SGCE-202ENST00000415788 FXYD2P54710 66 aa10.65□□□□□ -0.7
SGCE-202ENST00000415788 APOC4P55056 127 aa10.65□□□□□ -0.7
SGCE-202ENST00000415788 DEFB1P60022 68 aa10.65□□□□□ -0.7
SGCE-202ENST00000415788 CEND1Q8N111 149 aa10.65□□□□□ -0.7
SGCE-202ENST00000415788 PHLDA1Q8WV24 401 aaPredicted RBP10.65□□□□□ -0.7
SGCE-202ENST00000415788 RNF185Q96GF1 192 aa10.65□□□□□ -0.7
SGCE-202ENST00000415788 FXYD7P58549 80 aa10.64□□□□□ -0.71
SGCE-202ENST00000415788 RPL24P83731 157 aaKnown RBP10.64□□□□□ -0.71
SGCE-202ENST00000415788 MORN3Q6PF18 240 aaPredicted RBP10.64□□□□□ -0.71
SGCE-202ENST00000415788 SIGMAR1Q99720 223 aa10.64□□□□□ -0.71
SGCE-202ENST00000415788 NOTCH1P46531 2555 aa10.64□□□□□ -0.71
SGCE-202ENST00000415788 E9PLD3 99 aa10.64□□□□□ -0.71
SGCE-202ENST00000415788 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
SGCE-202ENST00000415788 PRSS1P07477 247 aa10.64□□□□□ -0.71
SGCE-202ENST00000415788 RPL35AP18077 110 aaKnown RBP10.64□□□□□ -0.71
SGCE-202ENST00000415788 LINC00477Q96M19 166 aa10.64□□□□□ -0.71
SGCE-202ENST00000415788 TRBV25-1A0A075B6N4 114 aa10.63□□□□□ -0.71
SGCE-202ENST00000415788 TEX48A0A1B0GUV7 120 aa10.63□□□□□ -0.71
SGCE-202ENST00000415788 TCTAP57738 103 aa10.63□□□□□ -0.71
SGCE-202ENST00000415788 C9orf47Q6ZRZ4 202 aa10.63□□□□□ -0.71
SGCE-202ENST00000415788 Q8N8P6 123 aa10.63□□□□□ -0.71
SGCE-202ENST00000415788 IGKV2-40A0A087WW87 121 aaPredicted RBP10.62□□□□□ -0.71
SGCE-202ENST00000415788 IGKV2D-26A0A0A0MRZ7 120 aa10.62□□□□□ -0.71
SGCE-202ENST00000415788 TNFRSF6BO95407 300 aa10.62□□□□□ -0.71
SGCE-202ENST00000415788 IGKV2D-40P01614 121 aaPredicted RBP10.62□□□□□ -0.71
SGCE-202ENST00000415788 TMEM78Q5T7P6 136 aa10.62□□□□□ -0.71
SGCE-202ENST00000415788 C18orf15Q96N68 181 aa10.62□□□□□ -0.71
SGCE-202ENST00000415788 ODF3Q96PU9 254 aa10.62□□□□□ -0.71
SGCE-202ENST00000415788 PRSS47A8MTI9 375 aa10.61□□□□□ -0.71
SGCE-202ENST00000415788 FABP5P3A8MUU1 101 aa10.61□□□□□ -0.71
SGCE-202ENST00000415788 IGKV3-20P01619 116 aa10.61□□□□□ -0.71
SGCE-202ENST00000415788 C1QTNF4Q9BXJ3 329 aa10.61□□□□□ -0.71
SGCE-202ENST00000415788 AMTNQ6UX39 209 aa10.61□□□□□ -0.71
SGCE-202ENST00000415788 AGPAT4-IT1Q9H0P7 198 aa10.61□□□□□ -0.71
SGCE-202ENST00000415788 NBEAL1Q6ZS30 2694 aa10.6□□□□□ -0.71
SGCE-202ENST00000415788 TRBV7-9A0A0J9YWB2 115 aa10.6□□□□□ -0.71
SGCE-202ENST00000415788 IGLL5B9A064 214 aa10.6□□□□□ -0.71
SGCE-202ENST00000415788 ZC2HC1BQ5TFG8 222 aa10.6□□□□□ -0.71
SGCE-202ENST00000415788 NHP2Q9NX24 153 aaKnown RBP10.6□□□□□ -0.71
SGCE-202ENST00000415788 LENEPQ9Y5L5 61 aa10.6□□□□□ -0.71
SGCE-202ENST00000415788 PRB4P10163 310 aaPredicted RBP10.59□□□□□ -0.71
SGCE-202ENST00000415788 ZNF80P51504 273 aaPredicted RBP10.59□□□□□ -0.71
SGCE-202ENST00000415788 ERCC8Q13216 396 aa10.59□□□□□ -0.71
SGCE-202ENST00000415788 B9D2Q9BPU9 175 aa10.59□□□□□ -0.71
SGCE-202ENST00000415788 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
SGCE-202ENST00000415788 ORM1P02763 201 aa10.59□□□□□ -0.71
SGCE-202ENST00000415788 AZU1P20160 251 aa10.59□□□□□ -0.71
SGCE-202ENST00000415788 ZNF479Q96JC4 524 aa10.59□□□□□ -0.71
SGCE-202ENST00000415788 SPATA25Q9BR10 227 aa10.59□□□□□ -0.71
SGCE-202ENST00000415788 IGLV2-18A0A075B6J9 118 aa10.58□□□□□ -0.72
SGCE-202ENST00000415788 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
SGCE-202ENST00000415788 ZNF575Q86XF7 245 aa10.58□□□□□ -0.72
SGCE-202ENST00000415788 FAM19A4Q96LR4 140 aa10.58□□□□□ -0.72
SGCE-202ENST00000415788 A0A1B0GV72 72 aa10.57□□□□□ -0.72
SGCE-202ENST00000415788 K7ERJ3 54 aa10.57□□□□□ -0.72
SGCE-202ENST00000415788 PLNP26678 52 aa10.57□□□□□ -0.72
SGCE-202ENST00000415788 C12orf74Q32Q52 190 aa10.57□□□□□ -0.72
SGCE-202ENST00000415788 A0A087WX48 190 aa10.57□□□□□ -0.72
SGCE-202ENST00000415788 GIG44P09565 113 aaPredicted RBP10.57□□□□□ -0.72
SGCE-202ENST00000415788 LAGE3Q14657 143 aa10.57□□□□□ -0.72
SGCE-202ENST00000415788 SPINK13Q1W4C9 94 aa10.57□□□□□ -0.72
SGCE-202ENST00000415788 SBSPONQ8IVN8 264 aa10.57□□□□□ -0.72
SGCE-202ENST00000415788 Q8TAT8 98 aa10.57□□□□□ -0.72
SGCE-202ENST00000415788 MSRB1Q9NZV6 116 aa10.57□□□□□ -0.72
SGCE-202ENST00000415788 DNAH3Q8TD57 4116 aa10.56□□□□□ -0.72
SGCE-202ENST00000415788 XCL2Q9UBD3 114 aa10.56□□□□□ -0.72
SGCE-202ENST00000415788 A0A1B0GWB2 263 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 TTTY13Q9BZ97 58 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 GTSF1LQ9H1H1 148 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 TP53TG1Q9Y2A0 90 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 TRAV12-1A0A0B4J245 112 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 KLLNB2CW77 178 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 INSP01308 110 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 WFDC2Q14508 124 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 RRN3P1Q2M238 152 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 GAGE13Q4V321 117 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 TM2D3Q9BRN9 247 aa10.55□□□□□ -0.72
SGCE-202ENST00000415788 MRPL35Q9NZE8 188 aaKnown RBP10.55□□□□□ -0.72
SGCE-202ENST00000415788 AGRNO00468 2067 aa10.54□□□□□ -0.72
SGCE-202ENST00000415788 NHLRC4P0CG21 123 aaPredicted RBP10.54□□□□□ -0.72
SGCE-202ENST00000415788 DEFB135Q30KP9 77 aa10.54□□□□□ -0.72
SGCE-202ENST00000415788 ZFAND2AQ8N6M9 145 aa10.54□□□□□ -0.72
SGCE-202ENST00000415788 CSNK1G2-AS1Q8NCQ2 148 aa10.54□□□□□ -0.72
SGCE-202ENST00000415788 SMAGPQ0VAQ4 97 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 RNF183Q96D59 192 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 HIST1H4GQ99525 98 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 TRBV7-3A0A075B6L6 115 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 IGHV4-4A0A075B6R2 117 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 TRAV12-2A0A075B6T6 113 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 H7C1H1 209 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 SPRY2O43597 315 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 GAS8-AS1O95177 125 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 MAPKAPK5-AS1Q8N8E1 139 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 NRACQ8N912 160 aa10.53□□□□□ -0.72
SGCE-202ENST00000415788 F8VRH5 84 aa10.52□□□□□ -0.73
SGCE-202ENST00000415788 ATP6V0E2Q8NHE4 81 aa10.52□□□□□ -0.73
SGCE-202ENST00000415788 MRAP2Q96G30 205 aa10.52□□□□□ -0.73
SGCE-202ENST00000415788 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.51□□□□□ -0.73
SGCE-202ENST00000415788 J3KRW8 73 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms