RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 LINC00467Q9BRT7 94 aa14.3□□□□□ -0.12
PTPRU-203ENST00000415600 TRGV2A0A075B6R0 118 aa14.29□□□□□ -0.12
PTPRU-203ENST00000415600 NBDYA0A0U1RRE5 68 aa14.29□□□□□ -0.12
PTPRU-203ENST00000415600 H3BNG1 76 aa14.29□□□□□ -0.12
PTPRU-203ENST00000415600 AMN1Q8IY45 258 aa14.29□□□□□ -0.12
PTPRU-203ENST00000415600 ZNRF2Q8NHG8 242 aa14.29□□□□□ -0.12
PTPRU-203ENST00000415600 SCRT2Q9NQ03 307 aa14.29□□□□□ -0.12
PTPRU-203ENST00000415600 NACAE9PAV3 2078 aa14.29□□□□□ -0.12
PTPRU-203ENST00000415600 S100A4P26447 101 aaKnown RBP14.28□□□□□ -0.12
PTPRU-203ENST00000415600 C12orf57Q99622 126 aa14.28□□□□□ -0.12
PTPRU-203ENST00000415600 GNRH2O43555 120 aa14.27□□□□□ -0.12
PTPRU-203ENST00000415600 SPANXN1Q5VSR9 72 aa14.27□□□□□ -0.12
PTPRU-203ENST00000415600 RNASE3P12724 160 aaKnown RBP14.26□□□□□ -0.13
PTPRU-203ENST00000415600 MRPL51Q4U2R6 128 aaKnown RBP14.26□□□□□ -0.13
PTPRU-203ENST00000415600 TTC32Q5I0X7 151 aa14.26□□□□□ -0.13
PTPRU-203ENST00000415600 LINC00588Q9Y4M8 146 aa14.26□□□□□ -0.13
PTPRU-203ENST00000415600 DNAH2Q9P225 4427 aa14.26□□□□□ -0.13
PTPRU-203ENST00000415600 C6orf223Q8N319 242 aa14.26□□□□□ -0.13
PTPRU-203ENST00000415600 RNF185Q96GF1 192 aa14.26□□□□□ -0.13
PTPRU-203ENST00000415600 GSN-AS1Q9NRJ2 163 aa14.26□□□□□ -0.13
PTPRU-203ENST00000415600 FAT2Q9NYQ8 4349 aa14.25□□□□□ -0.13
PTPRU-203ENST00000415600 TRGV1A0A0A0MS02 117 aa14.25□□□□□ -0.13
PTPRU-203ENST00000415600 RAB4AP20338 218 aa14.25□□□□□ -0.13
PTPRU-203ENST00000415600 PYY3Q5JQD4 70 aa14.25□□□□□ -0.13
PTPRU-203ENST00000415600 Q6ZTI0 123 aa14.25□□□□□ -0.13
PTPRU-203ENST00000415600 SMIM15Q7Z3B0 74 aa14.25□□□□□ -0.13
PTPRU-203ENST00000415600 ORMDL3Q8N138 153 aa14.25□□□□□ -0.13
PTPRU-203ENST00000415600 C18orf15Q96N68 181 aa14.25□□□□□ -0.13
PTPRU-203ENST00000415600 IGHV1OR15-1A0A075B7D0 117 aa14.24□□□□□ -0.13
PTPRU-203ENST00000415600 A0A0J9YY99 117 aa14.24□□□□□ -0.13
PTPRU-203ENST00000415600 D6R8Y8 96 aa14.24□□□□□ -0.13
PTPRU-203ENST00000415600 NIT1Q86X76 327 aa14.24□□□□□ -0.13
PTPRU-203ENST00000415600 SAMD10Q9BYL1 202 aa14.24□□□□□ -0.13
PTPRU-203ENST00000415600 PHLDA3Q9Y5J5 127 aa14.24□□□□□ -0.13
PTPRU-203ENST00000415600 DNAH17Q9UFH2 4485 aa14.24□□□□□ -0.13
PTPRU-203ENST00000415600 NXPH4O95158 308 aa14.23□□□□□ -0.13
PTPRU-203ENST00000415600 URB1-AS1Q96HZ7 61 aa14.23□□□□□ -0.13
PTPRU-203ENST00000415600 Q9H8V8 135 aa14.23□□□□□ -0.13
PTPRU-203ENST00000415600 PPBPP02775 128 aa14.22□□□□□ -0.13
PTPRU-203ENST00000415600 C11orf72Q8NBR9 251 aa14.22□□□□□ -0.13
PTPRU-203ENST00000415600 CHCHD1Q96BP2 118 aaKnown RBP14.22□□□□□ -0.13
PTPRU-203ENST00000415600 PRELID3AQ96N28 172 aa14.22□□□□□ -0.13
PTPRU-203ENST00000415600 HSBP1O75506 76 aa14.22□□□□□ -0.13
PTPRU-203ENST00000415600 EVI2AP22794 236 aa14.22□□□□□ -0.13
PTPRU-203ENST00000415600 CKS2P33552 79 aa14.22□□□□□ -0.13
PTPRU-203ENST00000415600 AMTP48728 403 aa14.22□□□□□ -0.13
PTPRU-203ENST00000415600 RNASEKQ6P5S7 137 aaKnown RBP14.22□□□□□ -0.13
PTPRU-203ENST00000415600 IGHV3-16A0A0C4DH30 117 aa14.21□□□□□ -0.14
PTPRU-203ENST00000415600 JOSD1Q15040 202 aaPredicted RBP14.21□□□□□ -0.14
PTPRU-203ENST00000415600 C9orf85Q96MD7 179 aa14.21□□□□□ -0.14
PTPRU-203ENST00000415600 UPK3BQ9BT76 320 aa14.21□□□□□ -0.14
PTPRU-203ENST00000415600 M0R381 172 aa14.2□□□□□ -0.14
PTPRU-203ENST00000415600 LINC00614P0C842 121 aa14.2□□□□□ -0.14
PTPRU-203ENST00000415600 PMCHP20382 165 aa14.2□□□□□ -0.14
PTPRU-203ENST00000415600 LAMTOR2Q9Y2Q5 125 aa14.2□□□□□ -0.14
PTPRU-203ENST00000415600 MUC4Q99102 2169 aa14.2□□□□□ -0.14
PTPRU-203ENST00000415600 PKHD1P08F94 4074 aa14.19□□□□□ -0.14
PTPRU-203ENST00000415600 TRGV11A0A075B6L2 103 aa14.19□□□□□ -0.14
PTPRU-203ENST00000415600 BTF3P20290 206 aaKnown RBP14.19□□□□□ -0.14
PTPRU-203ENST00000415600 ZNF415Q09FC8 603 aa14.19□□□□□ -0.14
PTPRU-203ENST00000415600 MRPS16Q9Y3D3 137 aaKnown RBP14.19□□□□□ -0.14
PTPRU-203ENST00000415600 HERC2O95714 4834 aa14.19□□□□□ -0.14
PTPRU-203ENST00000415600 SMKR1H3BMG3 65 aa14.17□□□□□ -0.14
PTPRU-203ENST00000415600 NPYP01303 97 aa14.17□□□□□ -0.14
PTPRU-203ENST00000415600 FAM19A2Q8N3H0 131 aa14.17□□□□□ -0.14
PTPRU-203ENST00000415600 AP1S3Q96PC3 154 aa14.17□□□□□ -0.14
PTPRU-203ENST00000415600 DPH3P1Q9H4G8 78 aa14.17□□□□□ -0.14
PTPRU-203ENST00000415600 NCR2O95944 276 aa14.17□□□□□ -0.14
PTPRU-203ENST00000415600 ESRGQ1W209 222 aa14.17□□□□□ -0.14
PTPRU-203ENST00000415600 ICOSQ9Y6W8 199 aa14.17□□□□□ -0.14
PTPRU-203ENST00000415600 PAX4O43316 350 aa14.16□□□□□ -0.14
PTPRU-203ENST00000415600 MRAP2Q96G30 205 aa14.16□□□□□ -0.14
PTPRU-203ENST00000415600 NIT2Q9NQR4 276 aa14.16□□□□□ -0.14
PTPRU-203ENST00000415600 MDFICQ9P1T7 246 aa14.16□□□□□ -0.14
PTPRU-203ENST00000415600 PRSS3P2Q8NHM4 247 aa14.15□□□□□ -0.14
PTPRU-203ENST00000415600 PRO0255Q9UI72 69 aa14.15□□□□□ -0.14
PTPRU-203ENST00000415600 TNP2Q05952 138 aa14.14□□□□□ -0.15
PTPRU-203ENST00000415600 FA2HQ7L5A8 372 aa14.14□□□□□ -0.15
PTPRU-203ENST00000415600 SYT8Q8NBV8 401 aa14.14□□□□□ -0.15
PTPRU-203ENST00000415600 A0A096LPF7 62 aa14.13□□□□□ -0.15
PTPRU-203ENST00000415600 IGHV1-24A0A0C4DH33 117 aa14.13□□□□□ -0.15
PTPRU-203ENST00000415600 C16orf90A8MZG2 172 aa14.13□□□□□ -0.15
PTPRU-203ENST00000415600 TNFRSF6BO95407 300 aa14.13□□□□□ -0.15
PTPRU-203ENST00000415600 C14orf178Q8N769 122 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-203ENST00000415600 VSIG2Q96IQ7 327 aa14.13□□□□□ -0.15
PTPRU-203ENST00000415600 SPXQ9BT56 116 aa14.13□□□□□ -0.15
PTPRU-203ENST00000415600 MAP1LC3AQ9H492 121 aa14.13□□□□□ -0.15
PTPRU-203ENST00000415600 AP5S1Q9NUS5 200 aa14.13□□□□□ -0.15
PTPRU-203ENST00000415600 MRPL16Q9NX20 251 aaKnown RBP14.13□□□□□ -0.15
PTPRU-203ENST00000415600 GAS8-AS1O95177 125 aa14.13□□□□□ -0.15
PTPRU-203ENST00000415600 IFI27P40305 119 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-203ENST00000415600 KIF25-AS1Q9Y6Z4 181 aa14.13□□□□□ -0.15
PTPRU-203ENST00000415600 LOC389332A0A1B0GUA5 103 aa14.12□□□□□ -0.15
PTPRU-203ENST00000415600 MRPL23Q16540 153 aaKnown RBP14.12□□□□□ -0.15
PTPRU-203ENST00000415600 CDPF1Q6NVV7 123 aa14.12□□□□□ -0.15
PTPRU-203ENST00000415600 NRACQ8N912 160 aa14.12□□□□□ -0.15
PTPRU-203ENST00000415600 HHLA3Q9XRX5 114 aa14.12□□□□□ -0.15
PTPRU-203ENST00000415600 PKD1P98161 4303 aa14.11□□□□□ -0.15
PTPRU-203ENST00000415600 KIAA1109Q2LD37 5005 aa14.11□□□□□ -0.15
PTPRU-203ENST00000415600 DNAH11Q96DT5 4516 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms