RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 TMEM133Q9H2Q1 129 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 NAT8Q9UHE5 227 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 KLK5Q9Y337 293 aaPredicted RBP1.63□□□□□ -2.15
MCF2-204ENST00000414978 AMMECR1Q9Y4X0 333 aaPredicted RBP1.63□□□□□ -2.15
MCF2-204ENST00000414978 PDE6DO43924 150 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 IFNA10P01566 189 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 RBP4P02753 201 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 CRYBB3P26998 211 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 ATP6V0CP27449 155 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 SLC38A11Q08AI6 406 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 ZNF616Q08AN1 781 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 AKR1C8PQ5T2L2 129 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 SLC25A34Q6PIV7 304 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 LINC00311Q8N616 119 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 SH3BGRL3Q9H299 93 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 FKBP11Q9NYL4 201 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 PRNDQ9UKY0 176 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 RYR1P21817 5038 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 ABCA13Q86UQ4 5058 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 COL7A1Q02388 2944 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 IGLV1-50A0A075B6I6 118 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 UBE2L5PA0A1B0GUS4 154 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 A0A1B0GV72 72 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 UMAD1C9J7I0 102 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 COX7A2LO14548 114 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 BPY2O14599 106 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 IFNA4P05014 189 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 P0DMU3 169 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 FAM231AP0DMU4 169 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 FAM231CP0DMU5 169 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 LGALS9BQ3B8N2 356 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 VMA21Q3ZAQ7 101 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 LGALS9CQ6DKI2 356 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 TOMM20LQ6UXN7 152 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 EIF4E3Q8N5X7 224 aaKnown RBP1.63□□□□□ -2.15
MCF2-204ENST00000414978 ZNF709Q8N972 641 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 VSTM2AQ8TAG5 236 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 FAM213BQ8TBF2 198 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 TRAV3A0A0B4J244 114 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 A8MUN3 132 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 F8W036 122 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 M0R1W7 72 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 IGKV1-16P04430 117 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 SAA1P0DJI8 122 aaPredicted RBP1.62□□□□□ -2.15
MCF2-204ENST00000414978 ZNF137PP52743 207 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 TMEM14EPQ6UXP3 125 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 OR4C12Q96R67 309 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 NABP2Q9BQ15 211 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 COMMD5Q9GZQ3 224 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 TMEM14BQ9NUH8 114 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 BET1LQ9NYM9 111 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 MRPS16Q9Y3D3 137 aaKnown RBP1.62□□□□□ -2.15
MCF2-204ENST00000414978 TRAV4A0A0B4J268 109 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 IGHV1-3A0A0C4DH29 117 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 C17orf112F2Z3M2 114 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 BUB1B-PAK6H3BSN5 160 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 DLEU1O43261 78 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 SLC25A20O43772 301 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 HLA-DRB1P01911 266 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 FGF7P21781 194 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 OR10J1P30954 320 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 SNCAP37840 140 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 RPS28P62857 69 aaKnown RBP1.62□□□□□ -2.15
MCF2-204ENST00000414978 PRB3Q04118 309 aaPredicted RBP1.62□□□□□ -2.15
MCF2-204ENST00000414978 DIAPH2-AS1Q14236 149 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 DPPA3Q6W0C5 159 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 CHCHD7Q9BUK0 85 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 PBDC1Q9BVG4 233 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 WDR61Q9GZS3 305 aaKnown RBP1.62□□□□□ -2.15
MCF2-204ENST00000414978 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.62□□□□□ -2.15
MCF2-204ENST00000414978 A0A1B0GV50 99 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 M0QZK8 103 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 ZNF705DP0CH99 300 aaPredicted RBP1.62□□□□□ -2.15
MCF2-204ENST00000414978 NTF3P20783 257 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 CSN1S1P47710 185 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 ERHP84090 104 aaKnown RBP1.62□□□□□ -2.15
MCF2-204ENST00000414978 SERF2P84101 59 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 PRCDQ00LT1 54 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 AKR1C1Q04828 323 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 PEA15Q15121 130 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 PLGLAQ15195 96 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 C12orf74Q32Q52 190 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 FAM229BQ4G0N7 80 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 LCE1AQ5T7P2 110 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 SCXQ7RTU7 201 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 VMO1Q7Z5L0 202 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 OR11H6Q8NGC7 330 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 SFT2D1Q8WV19 159 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 LINC00052Q96N35 136 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 PSMG3Q9BT73 122 aaPredicted RBP1.62□□□□□ -2.15
MCF2-204ENST00000414978 TIMM9Q9Y5J7 89 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 HILPDAQ9Y5L2 63 aa1.62□□□□□ -2.15
MCF2-204ENST00000414978 TEX50A0A1B0GTY4 177 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 TMEM218A2RU14 115 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 H3BMM0 161 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.61□□□□□ -2.15
MCF2-204ENST00000414978 APOC3P02656 99 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 DEFA5Q01523 94 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 KLRD1Q13241 179 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 DEFB112Q30KQ8 113 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms