RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 A0A1B0GW15 77 aa10.03□□□□□ -0.8
LIMS1-206ENST00000414829 UBE2D3P61077 147 aa10.03□□□□□ -0.8
LIMS1-206ENST00000414829 PKIAP61925 76 aa10.03□□□□□ -0.8
LIMS1-206ENST00000414829 UBE2D2P62837 147 aa10.03□□□□□ -0.8
LIMS1-206ENST00000414829 C6orf223Q8N319 242 aa10.03□□□□□ -0.8
LIMS1-206ENST00000414829 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
LIMS1-206ENST00000414829 DNAH6Q9C0G6 4158 aa10.03□□□□□ -0.8
LIMS1-206ENST00000414829 S100A8P05109 93 aa10.02□□□□□ -0.81
LIMS1-206ENST00000414829 LINC00315P59091 139 aa10.02□□□□□ -0.81
LIMS1-206ENST00000414829 LINC01556Q5JQF7 62 aa10.02□□□□□ -0.81
LIMS1-206ENST00000414829 RASL11AQ6T310 242 aa10.02□□□□□ -0.81
LIMS1-206ENST00000414829 NEXN-AS1Q8NBZ9 246 aa10.02□□□□□ -0.81
LIMS1-206ENST00000414829 SMIM27A0A1W2PRY6 76 aa10.01□□□□□ -0.81
LIMS1-206ENST00000414829 M0QY20 66 aa10.01□□□□□ -0.81
LIMS1-206ENST00000414829 MT-ND4LP03901 98 aa10.01□□□□□ -0.81
LIMS1-206ENST00000414829 SUMO4Q6EEV6 95 aa10.01□□□□□ -0.81
LIMS1-206ENST00000414829 KCNIP4Q6PIL6 250 aa10.01□□□□□ -0.81
LIMS1-206ENST00000414829 NFE4Q86UQ8 179 aa10.01□□□□□ -0.81
LIMS1-206ENST00000414829 WFDC10BQ8IUB3 73 aa10.01□□□□□ -0.81
LIMS1-206ENST00000414829 NACAE9PAV3 2078 aa10.01□□□□□ -0.81
LIMS1-206ENST00000414829 COMMD7Q86VX2 200 aa10□□□□□ -0.81
LIMS1-206ENST00000414829 NUP35Q8NFH5 326 aa10□□□□□ -0.81
LIMS1-206ENST00000414829 ANAPC16Q96DE5 110 aa10□□□□□ -0.81
LIMS1-206ENST00000414829 CHCHD7Q9BUK0 85 aa10□□□□□ -0.81
LIMS1-206ENST00000414829 URGCP-MRPS24S4R325 110 aa10□□□□□ -0.81
LIMS1-206ENST00000414829 TMEM218A2RU14 115 aa9.99□□□□□ -0.81
LIMS1-206ENST00000414829 TMEM191AQ9H0A3 160 aa9.99□□□□□ -0.81
LIMS1-206ENST00000414829 NIT2Q9NQR4 276 aa9.99□□□□□ -0.81
LIMS1-206ENST00000414829 TRBV6-8A0A0A6YYG3 113 aa9.98□□□□□ -0.81
LIMS1-206ENST00000414829 SEC11CQ9BY50 192 aa9.98□□□□□ -0.81
LIMS1-206ENST00000414829 LINC00862A6NCI5 91 aa9.97□□□□□ -0.81
LIMS1-206ENST00000414829 F8W036 122 aa9.97□□□□□ -0.81
LIMS1-206ENST00000414829 PPP1R17O96001 155 aa9.97□□□□□ -0.81
LIMS1-206ENST00000414829 LAGE3Q14657 143 aa9.97□□□□□ -0.81
LIMS1-206ENST00000414829 ATP5L2Q7Z4Y8 100 aa9.97□□□□□ -0.81
LIMS1-206ENST00000414829 MRAP2Q96G30 205 aa9.97□□□□□ -0.81
LIMS1-206ENST00000414829 Q9UF83 564 aa9.97□□□□□ -0.81
LIMS1-206ENST00000414829 TRBV25-1A0A075B6N4 114 aa9.96□□□□□ -0.82
LIMS1-206ENST00000414829 A0A087WX48 190 aa9.96□□□□□ -0.82
LIMS1-206ENST00000414829 PRSS29PA6NIE9 313 aa9.96□□□□□ -0.82
LIMS1-206ENST00000414829 HBBP68871 147 aa9.96□□□□□ -0.82
LIMS1-206ENST00000414829 ELOBQ15370 118 aa9.96□□□□□ -0.82
LIMS1-206ENST00000414829 KRTAP1-5Q9BYS1 174 aa9.96□□□□□ -0.82
LIMS1-206ENST00000414829 RTL8CO15255 209 aa9.95□□□□□ -0.82
LIMS1-206ENST00000414829 IGHV1-24A0A0C4DH33 117 aa9.94□□□□□ -0.82
LIMS1-206ENST00000414829 COTL1Q14019 142 aa9.94□□□□□ -0.82
LIMS1-206ENST00000414829 NIT1Q86X76 327 aa9.94□□□□□ -0.82
LIMS1-206ENST00000414829 GATD1Q8NB37 220 aa9.94□□□□□ -0.82
LIMS1-206ENST00000414829 IBA57-AS1B1ANH7 110 aa9.93□□□□□ -0.82
LIMS1-206ENST00000414829 NCR2O95944 276 aa9.93□□□□□ -0.82
LIMS1-206ENST00000414829 IQCJQ1A5X6 159 aa9.93□□□□□ -0.82
LIMS1-206ENST00000414829 IMMP2LQ96T52 175 aa9.93□□□□□ -0.82
LIMS1-206ENST00000414829 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
LIMS1-206ENST00000414829 CTDSP1Q9GZU7 261 aa9.93□□□□□ -0.82
LIMS1-206ENST00000414829 TRAV8-3A0A0A6YYJ7 113 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 TRAV26-2A0A0B4J265 109 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 TRBV6-5A0A0K0K1A5 114 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 IGHV3-30P01768 117 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 IGHV3-33P01772 117 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 IGHV3-30-3P0DP02 117 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 IGHV3-30-5P0DP03 117 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 ADCYAP1P18509 176 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 CAMPP49913 170 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 NDUFA5Q16718 116 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 BTF3L4Q96K17 158 aa9.92□□□□□ -0.82
LIMS1-206ENST00000414829 TMEM262E9PQX1 116 aa9.91□□□□□ -0.82
LIMS1-206ENST00000414829 RAB4AP20338 218 aa9.91□□□□□ -0.82
LIMS1-206ENST00000414829 FAM104BQ5XKR9 115 aa9.91□□□□□ -0.82
LIMS1-206ENST00000414829 MRPL54Q6P161 138 aaKnown RBP9.91□□□□□ -0.82
LIMS1-206ENST00000414829 RMI2Q96E14 147 aa9.91□□□□□ -0.82
LIMS1-206ENST00000414829 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
LIMS1-206ENST00000414829 ST20Q9HBF5 79 aa9.91□□□□□ -0.82
LIMS1-206ENST00000414829 TRAV9-1A0A075B6T8 112 aa9.9□□□□□ -0.82
LIMS1-206ENST00000414829 A0A1B0GXF2 115 aa9.9□□□□□ -0.82
LIMS1-206ENST00000414829 SDHAF1A6NFY7 115 aa9.9□□□□□ -0.82
LIMS1-206ENST00000414829 EREGO14944 169 aa9.9□□□□□ -0.82
LIMS1-206ENST00000414829 PPBPP02775 128 aa9.9□□□□□ -0.82
LIMS1-206ENST00000414829 S100PP25815 95 aa9.9□□□□□ -0.82
LIMS1-206ENST00000414829 RHEBQ15382 184 aa9.9□□□□□ -0.82
LIMS1-206ENST00000414829 TM2D2Q9BX73 214 aa9.9□□□□□ -0.82
LIMS1-206ENST00000414829 CARHSP1Q9Y2V2 147 aaKnown RBP9.9□□□□□ -0.82
LIMS1-206ENST00000414829 COX11Q9Y6N1 276 aa9.9□□□□□ -0.82
LIMS1-206ENST00000414829 UBE2L6O14933 153 aa9.89□□□□□ -0.83
LIMS1-206ENST00000414829 PSCAO43653 123 aa9.89□□□□□ -0.83
LIMS1-206ENST00000414829 AMTP48728 403 aa9.89□□□□□ -0.83
LIMS1-206ENST00000414829 Q0VG73 95 aa9.89□□□□□ -0.83
LIMS1-206ENST00000414829 RPL39LQ96EH5 51 aaKnown RBP9.89□□□□□ -0.83
LIMS1-206ENST00000414829 RNF185Q96GF1 192 aa9.89□□□□□ -0.83
LIMS1-206ENST00000414829 TMEM242Q9NWH2 141 aa9.89□□□□□ -0.83
LIMS1-206ENST00000414829 I3L3M4 83 aa9.88□□□□□ -0.83
LIMS1-206ENST00000414829 TCAPO15273 167 aa9.88□□□□□ -0.83
LIMS1-206ENST00000414829 CRPP02741 224 aa9.88□□□□□ -0.83
LIMS1-206ENST00000414829 APCSP02743 223 aa9.88□□□□□ -0.83
LIMS1-206ENST00000414829 C10orf91Q5T1B1 145 aa9.88□□□□□ -0.83
LIMS1-206ENST00000414829 H7C423 109 aa9.87□□□□□ -0.83
LIMS1-206ENST00000414829 PMCHP20382 165 aa9.87□□□□□ -0.83
LIMS1-206ENST00000414829 CKS2P33552 79 aa9.87□□□□□ -0.83
LIMS1-206ENST00000414829 Q6ZRN7 208 aaPredicted RBP9.87□□□□□ -0.83
LIMS1-206ENST00000414829 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms