RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ASIPP42127 132 aa7.29□□□□□ -1.24
DDB1-202ENST00000414411 ANXA2RQ3ZCQ2 193 aa7.29□□□□□ -1.24
DDB1-202ENST00000414411 MRAP2Q96G30 205 aa7.29□□□□□ -1.24
DDB1-202ENST00000414411 KNCNA6PVL3 124 aa7.28□□□□□ -1.24
DDB1-202ENST00000414411 HLA-DRB4P13762 266 aa7.28□□□□□ -1.24
DDB1-202ENST00000414411 S100A4P26447 101 aaKnown RBP7.28□□□□□ -1.24
DDB1-202ENST00000414411 RNASE4P34096 147 aaKnown RBP7.28□□□□□ -1.24
DDB1-202ENST00000414411 KIR3DS1Q14943 382 aa7.28□□□□□ -1.24
DDB1-202ENST00000414411 MPV17L2Q567V2 206 aa7.28□□□□□ -1.24
DDB1-202ENST00000414411 C18orf15Q96N68 181 aa7.28□□□□□ -1.24
DDB1-202ENST00000414411 HLA-DRB4X5D2U9 266 aa7.28□□□□□ -1.24
DDB1-202ENST00000414411 A0A0U1RRA0 63 aa7.27□□□□□ -1.25
DDB1-202ENST00000414411 KLLNB2CW77 178 aa7.27□□□□□ -1.25
DDB1-202ENST00000414411 M0R381 172 aa7.27□□□□□ -1.25
DDB1-202ENST00000414411 SEC61GP60059 68 aa7.27□□□□□ -1.25
DDB1-202ENST00000414411 K7EIL1 84 aa7.27□□□□□ -1.25
DDB1-202ENST00000414411 NUDT3O95989 172 aa7.27□□□□□ -1.25
DDB1-202ENST00000414411 PRB2P02812 416 aaPredicted RBP7.27□□□□□ -1.25
DDB1-202ENST00000414411 FGF6P10767 208 aa7.27□□□□□ -1.25
DDB1-202ENST00000414411 AMTNQ6UX39 209 aa7.27□□□□□ -1.25
DDB1-202ENST00000414411 C2orf91Q6ZV80 131 aa7.27□□□□□ -1.25
DDB1-202ENST00000414411 TRPT1Q86TN4 253 aaKnown RBP7.27□□□□□ -1.25
DDB1-202ENST00000414411 PHLDA3Q9Y5J5 127 aa7.27□□□□□ -1.25
DDB1-202ENST00000414411 DUSP14O95147 198 aaKnown RBP7.26□□□□□ -1.25
DDB1-202ENST00000414411 NPSP0C0P6 89 aa7.26□□□□□ -1.25
DDB1-202ENST00000414411 IGHV4-30-4P0DP06 118 aa7.26□□□□□ -1.25
DDB1-202ENST00000414411 RNASE3P12724 160 aaKnown RBP7.26□□□□□ -1.25
DDB1-202ENST00000414411 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
DDB1-202ENST00000414411 LAGE3Q14657 143 aa7.26□□□□□ -1.25
DDB1-202ENST00000414411 BVES-AS1Q5T3Y7 98 aa7.26□□□□□ -1.25
DDB1-202ENST00000414411 DPH3P1Q9H4G8 78 aa7.26□□□□□ -1.25
DDB1-202ENST00000414411 DKK2Q9UBU2 259 aa7.26□□□□□ -1.25
DDB1-202ENST00000414411 RBMY1BA6NDE4 496 aaKnown RBP7.25□□□□□ -1.25
DDB1-202ENST00000414411 RBMY1EA6NEQ0 496 aaKnown RBP7.25□□□□□ -1.25
DDB1-202ENST00000414411 GNRH2O43555 120 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 SPRY2O43597 315 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 NXPH4O95158 308 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 RBMY1DP0C7P1 496 aaKnown RBP7.25□□□□□ -1.25
DDB1-202ENST00000414411 STHQ8IWL8 128 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 ORAOV1Q8WV07 137 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 SMIM2Q9BVW6 85 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 COX11Q9Y6N1 276 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 TMEM238C9JI98 176 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 SMIM17P0DL12 118 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 BOD1L2Q8IYS8 172 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 C14orf178Q8N769 122 aaPredicted RBP7.25□□□□□ -1.25
DDB1-202ENST00000414411 AP1S3Q96PC3 154 aa7.25□□□□□ -1.25
DDB1-202ENST00000414411 MUC4Q99102 2169 aa7.24□□□□□ -1.25
DDB1-202ENST00000414411 ATP5LO75964 103 aa7.24□□□□□ -1.25
DDB1-202ENST00000414411 GIG44P09565 113 aaPredicted RBP7.24□□□□□ -1.25
DDB1-202ENST00000414411 Q6ZVH6 145 aa7.24□□□□□ -1.25
DDB1-202ENST00000414411 RASL10AQ92737 203 aa7.24□□□□□ -1.25
DDB1-202ENST00000414411 ODF3Q96PU9 254 aa7.24□□□□□ -1.25
DDB1-202ENST00000414411 IGKV3-20P01619 116 aa7.23□□□□□ -1.25
DDB1-202ENST00000414411 PRSS1P07477 247 aa7.23□□□□□ -1.25
DDB1-202ENST00000414411 SUMO2P61956 95 aaKnown RBP7.23□□□□□ -1.25
DDB1-202ENST00000414411 FAM159AQ6UWV7 190 aa7.23□□□□□ -1.25
DDB1-202ENST00000414411 C20orf78Q9BR46 151 aa7.23□□□□□ -1.25
DDB1-202ENST00000414411 C7orf71A4D174 169 aa7.23□□□□□ -1.25
DDB1-202ENST00000414411 RPL35AP18077 110 aaKnown RBP7.23□□□□□ -1.25
DDB1-202ENST00000414411 POM121L12Q8N7R1 296 aa7.23□□□□□ -1.25
DDB1-202ENST00000414411 HHLA3Q9XRX5 114 aa7.23□□□□□ -1.25
DDB1-202ENST00000414411 PRKDCP78527 4128 aaKnown RBP7.22□□□□□ -1.25
DDB1-202ENST00000414411 COL7A1Q02388 2944 aa7.22□□□□□ -1.25
DDB1-202ENST00000414411 TRAV12-3A0A0B4J271 114 aa7.22□□□□□ -1.25
DDB1-202ENST00000414411 K7EMI3 77 aa7.22□□□□□ -1.25
DDB1-202ENST00000414411 MGPP08493 103 aa7.22□□□□□ -1.25
DDB1-202ENST00000414411 TCTAP57738 103 aa7.22□□□□□ -1.25
DDB1-202ENST00000414411 ORMDL2Q53FV1 153 aa7.22□□□□□ -1.25
DDB1-202ENST00000414411 MORN3Q6PF18 240 aaPredicted RBP7.22□□□□□ -1.25
DDB1-202ENST00000414411 KIR2DL5BQ8NHK3 375 aa7.22□□□□□ -1.25
DDB1-202ENST00000414411 RPL39LQ96EH5 51 aaKnown RBP7.22□□□□□ -1.25
DDB1-202ENST00000414411 CSTL1Q9H114 145 aa7.22□□□□□ -1.25
DDB1-202ENST00000414411 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.25
DDB1-202ENST00000414411 TAX1BP3O14907 124 aa7.21□□□□□ -1.25
DDB1-202ENST00000414411 DPM2O94777 84 aa7.21□□□□□ -1.25
DDB1-202ENST00000414411 IGKCP01834 107 aa7.21□□□□□ -1.25
DDB1-202ENST00000414411 NMUP48645 174 aa7.21□□□□□ -1.25
DDB1-202ENST00000414411 PCP2Q8IVA1 136 aa7.21□□□□□ -1.25
DDB1-202ENST00000414411 KIF25-AS1Q9Y6Z4 181 aa7.21□□□□□ -1.25
DDB1-202ENST00000414411 TENM3Q9P273 2699 aa7.21□□□□□ -1.26
DDB1-202ENST00000414411 FBN3Q75N90 2809 aa7.21□□□□□ -1.26
DDB1-202ENST00000414411 SIVA1O15304 175 aa7.21□□□□□ -1.26
DDB1-202ENST00000414411 PPP1R17O96001 155 aa7.21□□□□□ -1.26
DDB1-202ENST00000414411 LINC00315P59091 139 aa7.21□□□□□ -1.26
DDB1-202ENST00000414411 SPINK13Q1W4C9 94 aa7.21□□□□□ -1.26
DDB1-202ENST00000414411 TMEM97Q5BJF2 176 aa7.21□□□□□ -1.26
DDB1-202ENST00000414411 CSNK1G2-AS1Q8NCQ2 148 aa7.21□□□□□ -1.26
DDB1-202ENST00000414411 SEC11AP67812 179 aa7.2□□□□□ -1.26
DDB1-202ENST00000414411 DEFB121Q5J5C9 76 aa7.2□□□□□ -1.26
DDB1-202ENST00000414411 TOMM6Q96B49 74 aa7.2□□□□□ -1.26
DDB1-202ENST00000414411 MRPL35Q9NZE8 188 aaKnown RBP7.2□□□□□ -1.26
DDB1-202ENST00000414411 TRAV12-2A0A075B6T6 113 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 A0A087WX48 190 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 IGKV2D-26A0A0A0MRZ7 120 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.19□□□□□ -1.26
DDB1-202ENST00000414411 APOC4P55056 127 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 HSD52Q0P140 79 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 C9orf85Q96MD7 179 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 XCL2Q9UBD3 114 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms