RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 IGHV4-28A0A0C4DH34 117 aa6.56□□□□□ -1.36
SYNE1-211ENST00000413186 LGALS9O00182 355 aa6.56□□□□□ -1.36
SYNE1-211ENST00000413186 CD28P10747 220 aa6.56□□□□□ -1.36
SYNE1-211ENST00000413186 FUSP35637 526 aaKnown RBP eCLIP6.56□□□□□ -1.36
SYNE1-211ENST00000413186 CCDC140Q96MF4 163 aa6.56□□□□□ -1.36
SYNE1-211ENST00000413186 CHCHD5Q9BSY4 110 aa6.56□□□□□ -1.36
SYNE1-211ENST00000413186 ZNF580Q9UK33 172 aa6.56□□□□□ -1.36
SYNE1-211ENST00000413186 RBAKDNA6NC62 111 aa6.56□□□□□ -1.36
SYNE1-211ENST00000413186 C6orf226Q5I0X4 101 aa6.56□□□□□ -1.36
SYNE1-211ENST00000413186 LINC01006Q8NI28 216 aa6.56□□□□□ -1.36
SYNE1-211ENST00000413186 C1orf159Q96HA4 380 aa6.56□□□□□ -1.36
SYNE1-211ENST00000413186 GP9P14770 177 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 ZFP2Q6ZN57 461 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 C17orf77Q96MU5 243 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 RCHY1Q96PM5 261 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 A0A087WX48 190 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 ERCC8Q13216 396 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 LYZL1Q6UWQ5 148 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 PRR25Q96S07 402 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 KLK9Q9UKQ9 250 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 TANC2Q9HCD6 1990 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 MTORP42345 2549 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 TRAV26-1A0A087WT03 109 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 PRSS46E5RG02 174 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 LTAP01374 205 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 PSMB8P28062 276 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 TIMM17AQ99595 171 aa6.55□□□□□ -1.36
SYNE1-211ENST00000413186 CRIP2P52943 208 aaPredicted RBP6.54□□□□□ -1.36
SYNE1-211ENST00000413186 FAM110AQ9BQ89 295 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 IGKV1D-37A0A075B6S9 117 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 TRBV6-1A0A0K0K1D8 114 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 SPINK13Q1W4C9 94 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 LINC00479Q96M42 142 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 LEPROTO15243 131 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 KIR3DS1Q14943 382 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 ASPHD1Q5U4P2 390 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 TMEM256Q8N2U0 113 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 SMR3AQ99954 134 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 XCL2Q9UBD3 114 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 TRGV4A0A0C4DH28 118 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 NDUFB1O75438 58 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 IGLV1-40P01703 118 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 FXYD7P58549 80 aa6.54□□□□□ -1.36
SYNE1-211ENST00000413186 PSCAO43653 123 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 FAM167A-AS1Q96KT0 104 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 HECTD1Q9ULT8 2610 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 A0A087X0K7 114 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 PPIFP30405 207 aaKnown RBP6.53□□□□□ -1.36
SYNE1-211ENST00000413186 CXCL5P42830 114 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 IFI27L1Q96BM0 104 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 TRBV12-3P01733 135 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 ACANP16112 2415 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 IGHV1OR15-1A0A075B7D0 117 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 BRI3O95415 125 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 SIGLEC8Q9NYZ4 499 aa6.53□□□□□ -1.36
SYNE1-211ENST00000413186 CHTOPQ9Y3Y2 248 aaKnown RBP6.53□□□□□ -1.36
SYNE1-211ENST00000413186 LYRM9A8MSI8 78 aa6.52□□□□□ -1.37
SYNE1-211ENST00000413186 ADARB2-AS1A8MUL3 147 aa6.52□□□□□ -1.37
SYNE1-211ENST00000413186 UNQ9165/PRO28630Q6UXU0 137 aa6.52□□□□□ -1.37
SYNE1-211ENST00000413186 C18orf32Q8TCD1 76 aa6.52□□□□□ -1.37
SYNE1-211ENST00000413186 TRGV1A0A0A0MS02 117 aa6.52□□□□□ -1.37
SYNE1-211ENST00000413186 IGKCP01834 107 aa6.52□□□□□ -1.37
SYNE1-211ENST00000413186 IGKV4-1P06312 121 aa6.52□□□□□ -1.37
SYNE1-211ENST00000413186 RNF152Q8N8N0 203 aa6.52□□□□□ -1.37
SYNE1-211ENST00000413186 C20orf144Q9BQM9 153 aa6.52□□□□□ -1.37
SYNE1-211ENST00000413186 AGPAT4-IT1Q9H0P7 198 aa6.52□□□□□ -1.37
SYNE1-211ENST00000413186 hDV102S1A0JD36 115 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 ATOX1O00244 68 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 SERP1Q9Y6X1 66 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 K7EN84 100 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 RHODO00212 210 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 KALRNO60229 2985 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 C3orf79P0CE67 100 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 LAGE3Q14657 143 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 IGHV1-24A0A0C4DH33 117 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 PRIMA1Q86XR5 153 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 TMEM61Q8N0U2 210 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 PIFOQ8TCI5 191 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 IGKV3D-7A0A0C4DH55 119 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 MUC4Q99102 2169 aa6.51□□□□□ -1.37
SYNE1-211ENST00000413186 COX7A2LO14548 114 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 ARMS2P0C7Q2 107 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 IGLC2P0DOY2 106 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 GATA1P15976 413 aaPredicted RBP6.5□□□□□ -1.37
SYNE1-211ENST00000413186 KLF5Q13887 457 aaPredicted RBP6.5□□□□□ -1.37
SYNE1-211ENST00000413186 SERP2Q8N6R1 65 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 C16orf95Q9H693 158 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 HELZ2Q9BYK8 2649 aaKnown RBP6.5□□□□□ -1.37
SYNE1-211ENST00000413186 IGF2BP2-AS1Q96M15 143 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 TIMM21Q9BVV7 248 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 ORMDL1Q9P0S3 153 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 USP17L23D6RBM5 183 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.5□□□□□ -1.37
SYNE1-211ENST00000413186 M0QXV9 152 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 HLA-DMBP28068 263 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 UBE2DNLQ8IWF7 75 aa6.5□□□□□ -1.37
SYNE1-211ENST00000413186 FN1P02751 2386 aaKnown RBP6.5□□□□□ -1.37
SYNE1-211ENST00000413186 DMXL2Q8TDJ6 3036 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms