RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 KANTRA0A1W2PQU2 76 aa8.19□□□□□ -1.1
PTPRN-203ENST00000412847 hDV102S1A0JD36 115 aa8.19□□□□□ -1.1
PTPRN-203ENST00000412847 PHOX2AO14813 284 aa8.19□□□□□ -1.1
PTPRN-203ENST00000412847 MBP02144 154 aa8.19□□□□□ -1.1
PTPRN-203ENST00000412847 RAB4BP61018 213 aa8.19□□□□□ -1.1
PTPRN-203ENST00000412847 LINC00269Q8N2A0 174 aa8.19□□□□□ -1.1
PTPRN-203ENST00000412847 SPACA4Q8TDM5 124 aa8.19□□□□□ -1.1
PTPRN-203ENST00000412847 LINC01600Q96MT4 127 aa8.19□□□□□ -1.1
PTPRN-203ENST00000412847 ACTR3CQ9C0K3 210 aaPredicted RBP8.19□□□□□ -1.1
PTPRN-203ENST00000412847 ATP6V0CP27449 155 aa8.18□□□□□ -1.1
PTPRN-203ENST00000412847 RBX1P62877 108 aa8.18□□□□□ -1.1
PTPRN-203ENST00000412847 EIF5AP63241 154 aaKnown RBP8.18□□□□□ -1.1
PTPRN-203ENST00000412847 LINC01559Q495D7 138 aa8.18□□□□□ -1.1
PTPRN-203ENST00000412847 TMEM97Q5BJF2 176 aa8.18□□□□□ -1.1
PTPRN-203ENST00000412847 FAM162BQ5T6X4 162 aa8.18□□□□□ -1.1
PTPRN-203ENST00000412847 PRR27Q6MZM9 219 aa8.18□□□□□ -1.1
PTPRN-203ENST00000412847 C7orf33Q8WU49 177 aa8.18□□□□□ -1.1
PTPRN-203ENST00000412847 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.17□□□□□ -1.1
PTPRN-203ENST00000412847 BCL2L11O43521 198 aa8.17□□□□□ -1.1
PTPRN-203ENST00000412847 UBE2G2P60604 165 aa8.17□□□□□ -1.1
PTPRN-203ENST00000412847 SERF2P84101 59 aa8.17□□□□□ -1.1
PTPRN-203ENST00000412847 GAGE6Q13070 117 aa8.17□□□□□ -1.1
PTPRN-203ENST00000412847 ODF1Q14990 250 aa8.17□□□□□ -1.1
PTPRN-203ENST00000412847 NTM-AS1Q6ZSK4 140 aa8.17□□□□□ -1.1
PTPRN-203ENST00000412847 COX8CQ7Z4L0 72 aa8.17□□□□□ -1.1
PTPRN-203ENST00000412847 AP5S1Q9NUS5 200 aa8.17□□□□□ -1.1
PTPRN-203ENST00000412847 ZFP30Q9Y2G7 519 aa8.17□□□□□ -1.1
PTPRN-203ENST00000412847 KIF25-AS1Q9Y6Z4 181 aa8.17□□□□□ -1.1
PTPRN-203ENST00000412847 IGLV10-54A0A075B6I4 117 aa8.16□□□□□ -1.1
PTPRN-203ENST00000412847 TRBV25-1A0A075B6N4 114 aa8.16□□□□□ -1.1
PTPRN-203ENST00000412847 ZNF674Q2M3X9 581 aa8.16□□□□□ -1.1
PTPRN-203ENST00000412847 TMUB2Q71RG4 321 aa8.16□□□□□ -1.1
PTPRN-203ENST00000412847 HIST1H2BAQ96A08 127 aa8.16□□□□□ -1.1
PTPRN-203ENST00000412847 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
PTPRN-203ENST00000412847 TRBV6-1A0A0K0K1D8 114 aa8.15□□□□□ -1.1
PTPRN-203ENST00000412847 UBE2G1P62253 170 aa8.15□□□□□ -1.1
PTPRN-203ENST00000412847 REG3AQ06141 175 aa8.15□□□□□ -1.1
PTPRN-203ENST00000412847 WDR73Q6P4I2 378 aa8.15□□□□□ -1.1
PTPRN-203ENST00000412847 C9orf62Q8N4C0 152 aa8.15□□□□□ -1.1
PTPRN-203ENST00000412847 FMC1Q96HJ9 113 aa8.15□□□□□ -1.1
PTPRN-203ENST00000412847 DERL1Q9BUN8 251 aa8.15□□□□□ -1.1
PTPRN-203ENST00000412847 VAX2Q9UIW0 290 aa8.15□□□□□ -1.1
PTPRN-203ENST00000412847 A0A0J9YXV3 536 aa8.14□□□□□ -1.11
PTPRN-203ENST00000412847 FAM74A7A6NL05 159 aa8.14□□□□□ -1.11
PTPRN-203ENST00000412847 PRR3P79522 188 aaKnown RBP8.14□□□□□ -1.11
PTPRN-203ENST00000412847 RPL7L1Q6DKI1 246 aaKnown RBP8.14□□□□□ -1.11
PTPRN-203ENST00000412847 OR10AG1Q8NH19 301 aa8.14□□□□□ -1.11
PTPRN-203ENST00000412847 ZNF471Q9BX82 626 aaPredicted RBP8.14□□□□□ -1.11
PTPRN-203ENST00000412847 TRAV8-4A0A0B4J246 113 aa8.13□□□□□ -1.11
PTPRN-203ENST00000412847 CTXND1A0A1B0GTU2 59 aa8.13□□□□□ -1.11
PTPRN-203ENST00000412847 F5H697 171 aa8.13□□□□□ -1.11
PTPRN-203ENST00000412847 GAS8-AS1O95177 125 aa8.13□□□□□ -1.11
PTPRN-203ENST00000412847 P01737 135 aa8.13□□□□□ -1.11
PTPRN-203ENST00000412847 SLPIP03973 132 aa8.13□□□□□ -1.11
PTPRN-203ENST00000412847 EIF5AL1Q6IS14 154 aaKnown RBP8.13□□□□□ -1.11
PTPRN-203ENST00000412847 SLC51BQ86UW2 128 aa8.13□□□□□ -1.11
PTPRN-203ENST00000412847 NKX6-2Q9C056 277 aaPredicted RBP8.13□□□□□ -1.11
PTPRN-203ENST00000412847 IGHV1-24A0A0C4DH33 117 aa8.12□□□□□ -1.11
PTPRN-203ENST00000412847 ZNF726P1Q15940 193 aa8.12□□□□□ -1.11
PTPRN-203ENST00000412847 IQCJQ1A5X6 159 aa8.12□□□□□ -1.11
PTPRN-203ENST00000412847 C20orf203Q8NBC4 194 aa8.12□□□□□ -1.11
PTPRN-203ENST00000412847 STOML3Q8TAV4 291 aa8.12□□□□□ -1.11
PTPRN-203ENST00000412847 CYTL1Q9NRR1 136 aa8.12□□□□□ -1.11
PTPRN-203ENST00000412847 LTAP01374 205 aa8.11□□□□□ -1.11
PTPRN-203ENST00000412847 CXCL1P09341 107 aa8.11□□□□□ -1.11
PTPRN-203ENST00000412847 GZMBP10144 247 aa8.11□□□□□ -1.11
PTPRN-203ENST00000412847 GTSF1Q8WW33 167 aa8.11□□□□□ -1.11
PTPRN-203ENST00000412847 SNAI2O43623 268 aa8.1□□□□□ -1.11
PTPRN-203ENST00000412847 RAB5CP51148 216 aa8.1□□□□□ -1.11
PTPRN-203ENST00000412847 NKX2-5P52952 324 aaPredicted RBP8.1□□□□□ -1.11
PTPRN-203ENST00000412847 KRTAP10-8P60410 259 aa8.1□□□□□ -1.11
PTPRN-203ENST00000412847 COX6A2Q02221 97 aa8.1□□□□□ -1.11
PTPRN-203ENST00000412847 MAJINQ3KP22 176 aa8.1□□□□□ -1.11
PTPRN-203ENST00000412847 SPANXN1Q5VSR9 72 aa8.1□□□□□ -1.11
PTPRN-203ENST00000412847 REG3GQ6UW15 175 aa8.1□□□□□ -1.11
PTPRN-203ENST00000412847 IGKV2-24A0A0C4DH68 120 aa8.09□□□□□ -1.11
PTPRN-203ENST00000412847 MUC21A0A0G2JKD1 596 aa8.09□□□□□ -1.11
PTPRN-203ENST00000412847 MUC21A0A140T8X8 626 aa8.09□□□□□ -1.11
PTPRN-203ENST00000412847 UMAD1C9J7I0 102 aa8.09□□□□□ -1.11
PTPRN-203ENST00000412847 SMIM17P0DL12 118 aa8.09□□□□□ -1.11
PTPRN-203ENST00000412847 AKR1C3P42330 323 aa8.09□□□□□ -1.11
PTPRN-203ENST00000412847 C15orf56Q8N910 161 aa8.09□□□□□ -1.11
PTPRN-203ENST00000412847 AP1S3Q96PC3 154 aa8.09□□□□□ -1.11
PTPRN-203ENST00000412847 TCEAL7Q9BRU2 100 aa8.09□□□□□ -1.11
PTPRN-203ENST00000412847 IGLV4-60A0A075B6I1 120 aa8.08□□□□□ -1.12
PTPRN-203ENST00000412847 NDUFS6O75380 124 aaKnown RBP8.08□□□□□ -1.12
PTPRN-203ENST00000412847 OR5AL1P0C617 328 aa8.08□□□□□ -1.12
PTPRN-203ENST00000412847 AKR1C8PQ5T2L2 129 aa8.08□□□□□ -1.12
PTPRN-203ENST00000412847 SPINK6Q6UWN8 80 aa8.08□□□□□ -1.12
PTPRN-203ENST00000412847 STPG4Q8N801 248 aa8.08□□□□□ -1.12
PTPRN-203ENST00000412847 TMEM243Q9BU79 118 aa8.08□□□□□ -1.12
PTPRN-203ENST00000412847 GFRA4Q9GZZ7 299 aa8.08□□□□□ -1.12
PTPRN-203ENST00000412847 A0A1B0GUV1 79 aa8.07□□□□□ -1.12
PTPRN-203ENST00000412847 RPS10P46783 165 aaKnown RBP8.07□□□□□ -1.12
PTPRN-203ENST00000412847 SSTP61278 116 aa8.07□□□□□ -1.12
PTPRN-203ENST00000412847 CFAP161Q6P656 301 aa8.07□□□□□ -1.12
PTPRN-203ENST00000412847 PRSS3P2Q8NHM4 247 aa8.07□□□□□ -1.12
PTPRN-203ENST00000412847 LYPD6BQ8NI32 183 aa8.07□□□□□ -1.12
PTPRN-203ENST00000412847 SSBP4Q9BWG4 385 aaPredicted RBP8.07□□□□□ -1.12
PTPRN-203ENST00000412847 MAP1LC3B2A6NCE7 125 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms