RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 TPPP3Q9BW30 176 aa14.68□□□□□ -0.06
MSH6-202ENST00000411819 MPV17L2Q567V2 206 aa14.67□□□□□ -0.06
MSH6-202ENST00000411819 CENPWQ5EE01 88 aa14.67□□□□□ -0.06
MSH6-202ENST00000411819 Q6ZSA8 131 aa14.67□□□□□ -0.06
MSH6-202ENST00000411819 C15orf54Q8N8G6 183 aa14.67□□□□□ -0.06
MSH6-202ENST00000411819 C11orf52Q96A22 123 aa14.67□□□□□ -0.06
MSH6-202ENST00000411819 CHCHD5Q9BSY4 110 aa14.67□□□□□ -0.06
MSH6-202ENST00000411819 C1orf43Q9BWL3 253 aa14.67□□□□□ -0.06
MSH6-202ENST00000411819 MYCBP2O75592 4640 aa14.66□□□□□ -0.06
MSH6-202ENST00000411819 TEX46H3BTG2 121 aa14.65□□□□□ -0.06
MSH6-202ENST00000411819 ANGP03950 147 aaKnown RBP14.65□□□□□ -0.06
MSH6-202ENST00000411819 ATRAIDQ6UW56 229 aa14.65□□□□□ -0.06
MSH6-202ENST00000411819 MGPP08493 103 aa14.64□□□□□ -0.07
MSH6-202ENST00000411819 GZMBP10144 247 aa14.64□□□□□ -0.07
MSH6-202ENST00000411819 RAB5CP51148 216 aa14.64□□□□□ -0.07
MSH6-202ENST00000411819 DAZAP1Q96EP5 407 aaKnown RBP14.64□□□□□ -0.07
MSH6-202ENST00000411819 SRRM2Q9UQ35 2752 aaKnown RBP14.63□□□□□ -0.07
MSH6-202ENST00000411819 PKIAP61925 76 aa14.63□□□□□ -0.07
MSH6-202ENST00000411819 EIF5AL1Q6IS14 154 aaKnown RBP14.63□□□□□ -0.07
MSH6-202ENST00000411819 ENHOQ6UWT2 76 aa14.63□□□□□ -0.07
MSH6-202ENST00000411819 LINC00528Q8N1L1 170 aa14.63□□□□□ -0.07
MSH6-202ENST00000411819 FER1L6-AS1Q8NA97 138 aa14.63□□□□□ -0.07
MSH6-202ENST00000411819 OR2D3Q8NGH3 330 aa14.63□□□□□ -0.07
MSH6-202ENST00000411819 TRAV1-1A0A0B4J248 108 aa14.62□□□□□ -0.07
MSH6-202ENST00000411819 PLA2G1BP04054 148 aaKnown RBP14.62□□□□□ -0.07
MSH6-202ENST00000411819 TMEM97Q5BJF2 176 aa14.62□□□□□ -0.07
MSH6-202ENST00000411819 KIF25-AS1Q9Y6Z4 181 aa14.62□□□□□ -0.07
MSH6-202ENST00000411819 GNG4P50150 75 aa14.61□□□□□ -0.07
MSH6-202ENST00000411819 RPS20P60866 119 aaKnown RBP14.61□□□□□ -0.07
MSH6-202ENST00000411819 SCXQ7RTU7 201 aa14.61□□□□□ -0.07
MSH6-202ENST00000411819 VAX2Q9UIW0 290 aa14.61□□□□□ -0.07
MSH6-202ENST00000411819 RAB19A4D1S5 217 aa14.6□□□□□ -0.07
MSH6-202ENST00000411819 IFNA1P01562 189 aa14.6□□□□□ -0.07
MSH6-202ENST00000411819 IGLV2-8P01709 118 aa14.6□□□□□ -0.07
MSH6-202ENST00000411819 HLA-DQA1P01909 254 aa14.6□□□□□ -0.07
MSH6-202ENST00000411819 MEF2BQ02080 365 aaPredicted RBP14.6□□□□□ -0.07
MSH6-202ENST00000411819 C14orf177Q52M58 125 aa14.6□□□□□ -0.07
MSH6-202ENST00000411819 TRBV25-1A0A075B6N4 114 aa14.59□□□□□ -0.07
MSH6-202ENST00000411819 IGLC6P0CF74 106 aa14.59□□□□□ -0.07
MSH6-202ENST00000411819 SULT1A2P50226 295 aa14.59□□□□□ -0.07
MSH6-202ENST00000411819 GAGE6Q13070 117 aa14.59□□□□□ -0.07
MSH6-202ENST00000411819 CLPSL2Q6UWE3 100 aa14.59□□□□□ -0.07
MSH6-202ENST00000411819 NTM-AS1Q6ZSK4 140 aa14.59□□□□□ -0.07
MSH6-202ENST00000411819 C19orf71A6NCJ1 209 aa14.58□□□□□ -0.08
MSH6-202ENST00000411819 PDE6DO43924 150 aa14.58□□□□□ -0.08
MSH6-202ENST00000411819 P01737 135 aa14.58□□□□□ -0.08
MSH6-202ENST00000411819 XKRY2A2RUG3 117 aa14.57□□□□□ -0.08
MSH6-202ENST00000411819 H7C1H1 209 aa14.57□□□□□ -0.08
MSH6-202ENST00000411819 CACNG7P62955 275 aa14.57□□□□□ -0.08
MSH6-202ENST00000411819 MIAQ16674 131 aa14.57□□□□□ -0.08
MSH6-202ENST00000411819 SMIM12Q96EX1 92 aa14.57□□□□□ -0.08
MSH6-202ENST00000411819 MED9Q9NWA0 146 aa14.57□□□□□ -0.08
MSH6-202ENST00000411819 RBX1P62877 108 aa14.56□□□□□ -0.08
MSH6-202ENST00000411819 SUMO4Q6EEV6 95 aa14.56□□□□□ -0.08
MSH6-202ENST00000411819 IGHV1-24A0A0C4DH33 117 aa14.55□□□□□ -0.08
MSH6-202ENST00000411819 USP17L23D6RBM5 183 aa14.55□□□□□ -0.08
MSH6-202ENST00000411819 M0QY20 66 aa14.55□□□□□ -0.08
MSH6-202ENST00000411819 BCL2P10415 239 aa14.55□□□□□ -0.08
MSH6-202ENST00000411819 CHAC1Q9BUX1 264 aa14.55□□□□□ -0.08
MSH6-202ENST00000411819 TRBV20OR9-2A0A075B6H5 130 aa14.54□□□□□ -0.08
MSH6-202ENST00000411819 J3QL48 77 aa14.54□□□□□ -0.08
MSH6-202ENST00000411819 LINC00269Q8N2A0 174 aa14.54□□□□□ -0.08
MSH6-202ENST00000411819 BIN3Q9NQY0 253 aa14.54□□□□□ -0.08
MSH6-202ENST00000411819 TRGC1P0CF51 173 aa14.53□□□□□ -0.08
MSH6-202ENST00000411819 NKX2-5P52952 324 aaPredicted RBP14.53□□□□□ -0.08
MSH6-202ENST00000411819 IQCJQ1A5X6 159 aa14.53□□□□□ -0.08
MSH6-202ENST00000411819 LYZL1Q6UWQ5 148 aa14.53□□□□□ -0.08
MSH6-202ENST00000411819 TCTE3Q8IZS6 198 aa14.53□□□□□ -0.08
MSH6-202ENST00000411819 F2Z2F3 143 aa14.52□□□□□ -0.09
MSH6-202ENST00000411819 SLC51BQ86UW2 128 aa14.52□□□□□ -0.09
MSH6-202ENST00000411819 PRR34Q9NV39 138 aa14.52□□□□□ -0.09
MSH6-202ENST00000411819 RASL11AQ6T310 242 aa14.51□□□□□ -0.09
MSH6-202ENST00000411819 CIRBP-AS1Q8TBR5 109 aa14.51□□□□□ -0.09
MSH6-202ENST00000411819 DPH3P1Q9H4G8 78 aa14.51□□□□□ -0.09
MSH6-202ENST00000411819 NTF3P20783 257 aa14.49□□□□□ -0.09
MSH6-202ENST00000411819 DEFB104AQ8WTQ1 72 aa14.49□□□□□ -0.09
MSH6-202ENST00000411819 TMEM243Q9BU79 118 aa14.49□□□□□ -0.09
MSH6-202ENST00000411819 IGLV10-54A0A075B6I4 117 aa14.48□□□□□ -0.09
MSH6-202ENST00000411819 PRSS1P07477 247 aa14.48□□□□□ -0.09
MSH6-202ENST00000411819 REG3AQ06141 175 aa14.48□□□□□ -0.09
MSH6-202ENST00000411819 NUDT10Q8NFP7 164 aa14.48□□□□□ -0.09
MSH6-202ENST00000411819 NUDT11Q96G61 164 aa14.48□□□□□ -0.09
MSH6-202ENST00000411819 TAGLN2P37802 199 aaKnown RBP14.47□□□□□ -0.09
MSH6-202ENST00000411819 NIT2Q9NQR4 276 aa14.47□□□□□ -0.09
MSH6-202ENST00000411819 CTRLP40313 264 aa14.46□□□□□ -0.09
MSH6-202ENST00000411819 TWIST1Q15672 202 aa14.46□□□□□ -0.09
MSH6-202ENST00000411819 RNASE7Q9H1E1 156 aaKnown RBP14.46□□□□□ -0.09
MSH6-202ENST00000411819 RPP21Q9H633 154 aaKnown RBP14.46□□□□□ -0.09
MSH6-202ENST00000411819 UBE2L6O14933 153 aa14.45□□□□□ -0.1
MSH6-202ENST00000411819 KRTAP26-1Q6PEX3 210 aa14.45□□□□□ -0.1
MSH6-202ENST00000411819 C9orf62Q8N4C0 152 aa14.45□□□□□ -0.1
MSH6-202ENST00000411819 C20orf203Q8NBC4 194 aa14.45□□□□□ -0.1
MSH6-202ENST00000411819 AMTP48728 403 aa14.44□□□□□ -0.1
MSH6-202ENST00000411819 COTL1Q14019 142 aa14.44□□□□□ -0.1
MSH6-202ENST00000411819 DGAT2L7PQ6IED9 249 aa14.44□□□□□ -0.1
MSH6-202ENST00000411819 PGLYRP4Q96LB8 373 aa14.44□□□□□ -0.1
MSH6-202ENST00000411819 IGLV4-60A0A075B6I1 120 aa14.43□□□□□ -0.1
MSH6-202ENST00000411819 K7EN84 100 aa14.43□□□□□ -0.1
MSH6-202ENST00000411819 WDR73Q6P4I2 378 aa14.43□□□□□ -0.1
MSH6-202ENST00000411819 GFRA4Q9GZZ7 299 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms