RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TRAV12-3A0A0B4J271 114 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 M0R2P5 195 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 ACYP2P14621 99 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 INSL4Q14641 139 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 ATP11AUNQ6ZP68 121 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 SSBP3-AS1Q7Z2R9 100 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 Q8IZM0 81 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 HIGD1AQ9Y241 93 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 V9GYQ6 96 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 NRXN2Q9P2S2 1712 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 PKHD1P08F94 4074 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 ZNF815PA8K554 130 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 TMEM14DPA8MWL7 114 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 NBEAP1P0C6P0 100 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 SPRR1AP35321 89 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 SLC48A1Q6P1K1 146 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 UBE2DNLQ8IWF7 75 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 ERG28Q9UKR5 140 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 GINS2Q9Y248 185 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 DOPEY2Q9Y3R5 2298 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 C2CD3Q4AC94 2353 aa-0.45□□□□□ -2.48
PMS1-203ENST00000409593 TRAV22A0A0B4J277 110 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 J3QLW9 94 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 DEGS1O15121 323 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 RBP4P02753 201 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 GCHFRP30047 84 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 S100A5P33763 92 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 SPCS2Q15005 226 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 FAM74A4Q5TZK3 123 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 LINC01545Q5VT33 79 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 TCTE3Q8IZS6 198 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 V9GYV3 84 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 ZMYM4Q5VZL5 1548 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 SIPA1L3O60292 1781 aaPredicted RBP-0.46□□□□□ -2.48
PMS1-203ENST00000409593 NF1P21359 2839 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 HECTD1Q9ULT8 2610 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 MAP1AP78559 2803 aaPredicted RBP-0.46□□□□□ -2.48
PMS1-203ENST00000409593 A0A0D9SFI3 127 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 CCDC179H3BU77 68 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 K7EQZ3 153 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 SMIM24O75264 130 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 PITX3O75364 302 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 SPINK8P0C7L1 97 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 SPRR2AP35326 72 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 SKA2Q8WVK7 121 aaPredicted RBP-0.46□□□□□ -2.48
PMS1-203ENST00000409593 C10orf82Q8WW14 230 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 NDUFA12Q9UI09 145 aa-0.46□□□□□ -2.48
PMS1-203ENST00000409593 LAMC1P11047 1609 aa-0.47□□□□□ -2.48
PMS1-203ENST00000409593 C10orf71Q711Q0 1435 aa-0.47□□□□□ -2.48
PMS1-203ENST00000409593 BORCS7-ASMTA0A0B4J1R7 106 aa-0.47□□□□□ -2.48
PMS1-203ENST00000409593 LOC730098B7Z3J9 87 aa-0.47□□□□□ -2.48
PMS1-203ENST00000409593 CMPK1P30085 196 aa-0.47□□□□□ -2.48
PMS1-203ENST00000409593 RBM3P98179 157 aaKnown RBP-0.47□□□□□ -2.48
PMS1-203ENST00000409593 SCP2D1Q9UJQ7 156 aa-0.47□□□□□ -2.48
PMS1-203ENST00000409593 IBTKQ9P2D0 1353 aaPredicted RBP-0.47□□□□□ -2.49
PMS1-203ENST00000409593 ARFGEF1Q9Y6D6 1849 aa-0.47□□□□□ -2.49
PMS1-203ENST00000409593 APC2O95996 2303 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 ACANP16112 2415 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 FLGP20930 4061 aaPredicted RBP-0.48□□□□□ -2.49
PMS1-203ENST00000409593 ZNF609O15014 1411 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 TRAV1-2A0A0B4J238 106 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 TRBV10-3A0A0K0K1G6 114 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 TSTD3H0UI37 97 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 M0R129 80 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 SPRR2EP22531 72 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 EDDM3BP56851 147 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 KRTAP6-2Q3LI66 62 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 SMIM15Q7Z3B0 74 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 WFDC6Q9BQY6 131 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 BATF3Q9NR55 127 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 HSPB11Q9Y547 144 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 LAMA5O15230 3695 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 BICRAQ9NZM4 1560 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 PKDREJQ9NTG1 2253 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 IFT172Q9UG01 1749 aa-0.48□□□□□ -2.49
PMS1-203ENST00000409593 FLNBO75369 2602 aaKnown RBP-0.48□□□□□ -2.49
PMS1-203ENST00000409593 MYH9P35579 1960 aaKnown RBP-0.49□□□□□ -2.49
PMS1-203ENST00000409593 IQSEC2Q5JU85 1478 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 TRBV20-1A0A075B6N2 111 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 UBE2D1P51668 147 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 MORN2Q502X0 79 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 MIC13Q5XKP0 118 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 SPCS1Q9Y6A9 102 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 ADGRB1O14514 1584 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 FAM236AA0A1B0GUQ0 79 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 FAM236BA0A1B0GV22 79 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 H0YJX3 145 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 PIN1P1O15428 100 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 YPEL1O60688 119 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 AIF1LQ9BQI0 150 aa-0.49□□□□□ -2.49
PMS1-203ENST00000409593 LRP6O75581 1613 aa-0.5□□□□□ -2.49
PMS1-203ENST00000409593 NBEAL2Q6ZNJ1 2754 aa-0.5□□□□□ -2.49
PMS1-203ENST00000409593 PIEZO2Q9H5I5 2752 aa-0.5□□□□□ -2.49
PMS1-203ENST00000409593 NBEAL1Q6ZS30 2694 aa-0.5□□□□□ -2.49
PMS1-203ENST00000409593 PAPPAQ13219 1627 aa-0.5□□□□□ -2.49
PMS1-203ENST00000409593 M0R2T5 61 aa-0.5□□□□□ -2.49
PMS1-203ENST00000409593 PIRTP0C851 137 aa-0.5□□□□□ -2.49
PMS1-203ENST00000409593 C9orf116Q5BN46 136 aaPredicted RBP-0.5□□□□□ -2.49
PMS1-203ENST00000409593 MAGOHBQ96A72 148 aaKnown RBP-0.5□□□□□ -2.49
PMS1-203ENST00000409593 KDM3BQ7LBC6 1761 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms