RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 SPATA25Q9BR10 227 aa19.02■□□□□ 0.63
SPIRE1-202ENST00000409402 SPANXDQ9BXN6 97 aa19.02■□□□□ 0.63
SPIRE1-202ENST00000409402 ODF3Q96PU9 254 aa19.01■□□□□ 0.63
SPIRE1-202ENST00000409402 CCL25O15444 150 aa19.01■□□□□ 0.63
SPIRE1-202ENST00000409402 C4orf48Q5BLP8 95 aa19.01■□□□□ 0.63
SPIRE1-202ENST00000409402 LYRM9A8MSI8 78 aa19■□□□□ 0.63
SPIRE1-202ENST00000409402 NCR3O14931 201 aa19■□□□□ 0.63
SPIRE1-202ENST00000409402 BAALCQ8WXS3 180 aa19■□□□□ 0.63
SPIRE1-202ENST00000409402 RNF183Q96D59 192 aa19■□□□□ 0.63
SPIRE1-202ENST00000409402 OTOGLQ3ZCN5 2332 aa19■□□□□ 0.63
SPIRE1-202ENST00000409402 NOTCH2Q04721 2471 aa19■□□□□ 0.63
SPIRE1-202ENST00000409402 MUSTN1Q8IVN3 82 aa19■□□□□ 0.63
SPIRE1-202ENST00000409402 TRAV26-1A0A087WT03 109 aa19■□□□□ 0.63
SPIRE1-202ENST00000409402 C15orf53Q8NAA6 179 aa18.99■□□□□ 0.63
SPIRE1-202ENST00000409402 C9orf153Q5TBE3 101 aa18.98■□□□□ 0.63
SPIRE1-202ENST00000409402 FAM222AQ5U5X8 452 aa18.98■□□□□ 0.63
SPIRE1-202ENST00000409402 H3BQ85 93 aa18.97■□□□□ 0.63
SPIRE1-202ENST00000409402 P0C879 139 aa18.97■□□□□ 0.63
SPIRE1-202ENST00000409402 NTN5Q8WTR8 489 aaPredicted RBP18.97■□□□□ 0.63
SPIRE1-202ENST00000409402 PLA2G2EQ9NZK7 142 aa18.97■□□□□ 0.63
SPIRE1-202ENST00000409402 K7EQG2 157 aa18.97■□□□□ 0.63
SPIRE1-202ENST00000409402 K7EP13 123 aa18.96■□□□□ 0.63
SPIRE1-202ENST00000409402 GAGE12HA6NDE8 117 aa18.96■□□□□ 0.63
SPIRE1-202ENST00000409402 EBI3Q14213 229 aa18.96■□□□□ 0.63
SPIRE1-202ENST00000409402 Q6ZTI0 123 aa18.96■□□□□ 0.63
SPIRE1-202ENST00000409402 TRACP01848 142 aa18.95■□□□□ 0.62
SPIRE1-202ENST00000409402 C20orf203Q8NBC4 194 aa18.94■□□□□ 0.62
SPIRE1-202ENST00000409402 NDUFB1O75438 58 aa18.94■□□□□ 0.62
SPIRE1-202ENST00000409402 ANKRD29Q8N6D5 301 aa18.94■□□□□ 0.62
SPIRE1-202ENST00000409402 LINC00173Q6ZV60 143 aa18.94■□□□□ 0.62
SPIRE1-202ENST00000409402 DEFB131BA0A096LNP1 70 aa18.94■□□□□ 0.62
SPIRE1-202ENST00000409402 ANKHD1Q8IWZ3 2542 aaKnown RBP18.93■□□□□ 0.62
SPIRE1-202ENST00000409402 LY6LH3BQJ8 138 aa18.93■□□□□ 0.62
SPIRE1-202ENST00000409402 A4D1N5 150 aa18.93■□□□□ 0.62
SPIRE1-202ENST00000409402 C11orf86A6NJI1 115 aa18.92■□□□□ 0.62
SPIRE1-202ENST00000409402 DAND5Q8N907 189 aa18.92■□□□□ 0.62
SPIRE1-202ENST00000409402 C19orf71A6NCJ1 209 aa18.92■□□□□ 0.62
SPIRE1-202ENST00000409402 TP53TG3Q9ULZ0 132 aa18.92■□□□□ 0.62
SPIRE1-202ENST00000409402 PLA2G2AP14555 144 aa18.91■□□□□ 0.62
SPIRE1-202ENST00000409402 IGHV4-28A0A0C4DH34 117 aa18.91■□□□□ 0.62
SPIRE1-202ENST00000409402 CRYGBP07316 175 aa18.9■□□□□ 0.62
SPIRE1-202ENST00000409402 DIRC1Q969H9 104 aa18.9■□□□□ 0.62
SPIRE1-202ENST00000409402 C11orf1Q9H5F2 150 aa18.9■□□□□ 0.62
SPIRE1-202ENST00000409402 COA6Q5JTJ3 125 aaKnown RBP18.89■□□□□ 0.62
SPIRE1-202ENST00000409402 ANKRD39Q53RE8 183 aa18.89■□□□□ 0.61
SPIRE1-202ENST00000409402 CRYBA4P53673 196 aa18.89■□□□□ 0.61
SPIRE1-202ENST00000409402 SPG11Q96JI7 2443 aa18.88■□□□□ 0.61
SPIRE1-202ENST00000409402 BRWD1-AS2P59051 145 aa18.88■□□□□ 0.61
SPIRE1-202ENST00000409402 PSMG3-AS1Q96PY0 264 aa18.88■□□□□ 0.61
SPIRE1-202ENST00000409402 C1orf229Q6ZS94 237 aaPredicted RBP18.88■□□□□ 0.61
SPIRE1-202ENST00000409402 CITED1Q99966 193 aa18.88■□□□□ 0.61
SPIRE1-202ENST00000409402 MIFP14174 115 aa18.88■□□□□ 0.61
SPIRE1-202ENST00000409402 IGHV1-58A0A0C4DH39 117 aa18.88■□□□□ 0.61
SPIRE1-202ENST00000409402 E9PLD3 99 aa18.87■□□□□ 0.61
SPIRE1-202ENST00000409402 ZNF80P51504 273 aaPredicted RBP18.87■□□□□ 0.61
SPIRE1-202ENST00000409402 CRYGDP07320 174 aa18.87■□□□□ 0.61
SPIRE1-202ENST00000409402 REG3AQ06141 175 aa18.87■□□□□ 0.61
SPIRE1-202ENST00000409402 KIAA1549LQ6ZVL6 1849 aa18.87■□□□□ 0.61
SPIRE1-202ENST00000409402 PLCE1Q9P212 2302 aa18.87■□□□□ 0.61
SPIRE1-202ENST00000409402 LINC00482Q8N8I6 264 aa18.87■□□□□ 0.61
SPIRE1-202ENST00000409402 FAM110AQ9BQ89 295 aa18.87■□□□□ 0.61
SPIRE1-202ENST00000409402 HIGD2BQ4VC39 106 aa18.86■□□□□ 0.61
SPIRE1-202ENST00000409402 LINC00269Q8N2A0 174 aa18.86■□□□□ 0.61
SPIRE1-202ENST00000409402 MIR7-3HGQ8N6C7 128 aa18.86■□□□□ 0.61
SPIRE1-202ENST00000409402 B9D2Q9BPU9 175 aa18.86■□□□□ 0.61
SPIRE1-202ENST00000409402 ZNF702PQ9H963 129 aa18.85■□□□□ 0.61
SPIRE1-202ENST00000409402 IGKV2-24A0A0C4DH68 120 aa18.85■□□□□ 0.61
SPIRE1-202ENST00000409402 Q6ZUT4 128 aa18.85■□□□□ 0.61
SPIRE1-202ENST00000409402 FREM1Q5H8C1 2179 aa18.85■□□□□ 0.61
SPIRE1-202ENST00000409402 ZNF106Q9H2Y7 1883 aaKnown RBP18.85■□□□□ 0.61
SPIRE1-202ENST00000409402 P0DMU3 169 aa18.84■□□□□ 0.61
SPIRE1-202ENST00000409402 FAM231AP0DMU4 169 aa18.84■□□□□ 0.61
SPIRE1-202ENST00000409402 FAM231CP0DMU5 169 aa18.84■□□□□ 0.61
SPIRE1-202ENST00000409402 ZFAND2AQ8N6M9 145 aa18.84■□□□□ 0.61
SPIRE1-202ENST00000409402 NUPR1O60356 82 aa18.84■□□□□ 0.61
SPIRE1-202ENST00000409402 C20orf173Q96LM9 149 aa18.83■□□□□ 0.61
SPIRE1-202ENST00000409402 ACYP1P07311 99 aa18.83■□□□□ 0.6
SPIRE1-202ENST00000409402 C10orf99Q6UWK7 81 aa18.83■□□□□ 0.6
SPIRE1-202ENST00000409402 CEMP1Q6PRD7 247 aaPredicted RBP18.83■□□□□ 0.6
SPIRE1-202ENST00000409402 Q6ZPA2 131 aa18.82■□□□□ 0.6
SPIRE1-202ENST00000409402 LINC01006Q8NI28 216 aa18.82■□□□□ 0.6
SPIRE1-202ENST00000409402 NREPQ16612 68 aa18.81■□□□□ 0.6
SPIRE1-202ENST00000409402 RS1O15537 224 aa18.8■□□□□ 0.6
SPIRE1-202ENST00000409402 ZFAND3Q9H8U3 227 aa18.8■□□□□ 0.6
SPIRE1-202ENST00000409402 PSMB8P28062 276 aa18.8■□□□□ 0.6
SPIRE1-202ENST00000409402 EIF4EBP1Q13541 118 aaPredicted RBP18.8■□□□□ 0.6
SPIRE1-202ENST00000409402 UFSP1Q6NVU6 142 aa18.8■□□□□ 0.6
SPIRE1-202ENST00000409402 H7C423 109 aa18.79■□□□□ 0.6
SPIRE1-202ENST00000409402 HIGD1BQ9P298 99 aa18.78■□□□□ 0.6
SPIRE1-202ENST00000409402 NACAE9PAV3 2078 aa18.78■□□□□ 0.6
SPIRE1-202ENST00000409402 LECT2O14960 151 aa18.78■□□□□ 0.6
SPIRE1-202ENST00000409402 CRIP3Q6Q6R5 217 aa18.78■□□□□ 0.6
SPIRE1-202ENST00000409402 CHD3Q12873 2000 aaKnown RBP18.78■□□□□ 0.6
SPIRE1-202ENST00000409402 ODF1Q14990 250 aa18.77■□□□□ 0.6
SPIRE1-202ENST00000409402 CHCHD10Q8WYQ3 142 aaPredicted RBP18.77■□□□□ 0.6
SPIRE1-202ENST00000409402 TRAV10A0A0B4J240 114 aa18.77■□□□□ 0.6
SPIRE1-202ENST00000409402 PTPN13Q12923 2485 aa18.77■□□□□ 0.59
SPIRE1-202ENST00000409402 KIR2DL5BA0A0G2JN68 375 aa18.77■□□□□ 0.59
SPIRE1-202ENST00000409402 KIR2DL5BA0A0G2JPC4 375 aa18.77■□□□□ 0.59
SPIRE1-202ENST00000409402 KIR2DL5AQ8N109 375 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 805.3 ms