RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 M0R3E3 92 aa8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 ZNF253O75346 499 aa8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 TRAPPC1Q9Y5R8 145 aa8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
CHRNA1-203ENST00000409219 IGLV2-11P01706 119 aa8.44□□□□□ -1.06
CHRNA1-203ENST00000409219 TIRAPP58753 221 aa8.44□□□□□ -1.06
CHRNA1-203ENST00000409219 CT83Q5H943 113 aa8.44□□□□□ -1.06
CHRNA1-203ENST00000409219 TMEM183AQ8IXX5 376 aa8.44□□□□□ -1.06
CHRNA1-203ENST00000409219 CMTM2Q8TAZ6 248 aa8.44□□□□□ -1.06
CHRNA1-203ENST00000409219 SERTM2A0A1B0GWG4 89 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 GATCO43716 136 aaKnown RBP8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 IGHV3-30P01768 117 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 IGHV3-33P01772 117 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 MT-ND6P03923 174 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 GPX1P07203 203 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 IGHV3-30-5P0DP03 117 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 CRISP2P16562 243 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 LAGE3Q14657 143 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 WDR73Q6P4I2 378 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 RASL11AQ6T310 242 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 Q86TA4 180 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 EXOC3-AS1Q8N2X6 119 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 ZFAND2AQ8N6M9 145 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 NHLRC2Q8NBF2 726 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 NUDT10Q8NFP7 164 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 DAZAP1Q96EP5 407 aaKnown RBP8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 NUDT11Q96G61 164 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 C12orf57Q99622 126 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 TM2D2Q9BX73 214 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 GNB1LQ9BYB4 327 aa8.43□□□□□ -1.06
CHRNA1-203ENST00000409219 C19orf71A6NCJ1 209 aa8.42□□□□□ -1.06
CHRNA1-203ENST00000409219 K7EQM0 130 aa8.42□□□□□ -1.06
CHRNA1-203ENST00000409219 S100A2P29034 98 aa8.42□□□□□ -1.06
CHRNA1-203ENST00000409219 RPL37AP61513 92 aaKnown RBP8.42□□□□□ -1.06
CHRNA1-203ENST00000409219 MRPL53Q96EL3 112 aaKnown RBP8.42□□□□□ -1.06
CHRNA1-203ENST00000409219 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
CHRNA1-203ENST00000409219 ZFP30Q9Y2G7 519 aa8.42□□□□□ -1.06
CHRNA1-203ENST00000409219 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
CHRNA1-203ENST00000409219 FBLL1A6NHQ2 334 aaKnown RBP8.41□□□□□ -1.06
CHRNA1-203ENST00000409219 ASIPP42127 132 aa8.41□□□□□ -1.06
CHRNA1-203ENST00000409219 TDRG1Q3Y452 100 aa8.41□□□□□ -1.06
CHRNA1-203ENST00000409219 GOLT1AQ6ZVE7 132 aa8.41□□□□□ -1.06
CHRNA1-203ENST00000409219 TSKUQ8WUA8 353 aa8.41□□□□□ -1.06
CHRNA1-203ENST00000409219 LINC00477Q96M19 166 aa8.41□□□□□ -1.06
CHRNA1-203ENST00000409219 AAMDCQ9H7C9 122 aa8.41□□□□□ -1.06
CHRNA1-203ENST00000409219 RPH3ALQ9UNE2 315 aa8.41□□□□□ -1.06
CHRNA1-203ENST00000409219 TRAV8-6A0A0B4J262 113 aa8.4□□□□□ -1.06
CHRNA1-203ENST00000409219 FAM231BA6NCW3 169 aa8.4□□□□□ -1.06
CHRNA1-203ENST00000409219 DIRC3C9JPN6 131 aa8.4□□□□□ -1.06
CHRNA1-203ENST00000409219 OR10J3Q5JRS4 329 aa8.4□□□□□ -1.06
CHRNA1-203ENST00000409219 C9orf47Q6ZRZ4 202 aa8.4□□□□□ -1.06
CHRNA1-203ENST00000409219 SH2D6Q7Z4S9 175 aa8.4□□□□□ -1.06
CHRNA1-203ENST00000409219 Q8N3U1 123 aa8.4□□□□□ -1.06
CHRNA1-203ENST00000409219 RASL10AQ92737 203 aa8.4□□□□□ -1.06
CHRNA1-203ENST00000409219 GFRA4Q9GZZ7 299 aa8.4□□□□□ -1.06
CHRNA1-203ENST00000409219 NAT8BQ9UHF3 227 aa8.4□□□□□ -1.06
CHRNA1-203ENST00000409219 HLA-DQA1P01909 254 aa8.39□□□□□ -1.07
CHRNA1-203ENST00000409219 DNLZQ5SXM8 178 aa8.39□□□□□ -1.07
CHRNA1-203ENST00000409219 TMEM136Q6ZRR5 245 aa8.39□□□□□ -1.07
CHRNA1-203ENST00000409219 COX8CQ7Z4L0 72 aa8.39□□□□□ -1.07
CHRNA1-203ENST00000409219 SGK494Q96LW2 274 aa8.39□□□□□ -1.07
CHRNA1-203ENST00000409219 HIST1H2BLQ99880 126 aa8.39□□□□□ -1.07
CHRNA1-203ENST00000409219 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
CHRNA1-203ENST00000409219 RPP21Q9H633 154 aaKnown RBP8.39□□□□□ -1.07
CHRNA1-203ENST00000409219 IGKV2-40A0A087WW87 121 aaPredicted RBP8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 TRAV8-1A0A0A6YYK1 113 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 A8MWL6 223 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 IGKV2D-40P01614 121 aaPredicted RBP8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 CSN1S1P47710 185 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 MUC21Q5SSG8 566 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 PRR27Q6MZM9 219 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 ATP5L2Q7Z4Y8 100 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 NUP35Q8NFH5 326 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 BAALCQ8WXS3 180 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 PSG8Q9UQ74 426 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 P01737 135 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 Q0VG73 95 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 PRNTQ86SH4 94 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 OR10D4PQ8NGN7 298 aa8.38□□□□□ -1.07
CHRNA1-203ENST00000409219 IGHV3-16A0A0C4DH30 117 aa8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 A0A1B0GXF2 115 aa8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 HIGD1CA8MV81 97 aa8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 ESDP10768 282 aa8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 GATA1P15976 413 aaPredicted RBP8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 FOXA3P55318 350 aaPredicted RBP8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 S100A12P80511 92 aa8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 LELP1Q5T871 98 aa8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 OR4C5Q8NGB2 326 aa8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 PACRGQ96M98 296 aaPredicted RBP8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 SPXQ9BT56 116 aa8.37□□□□□ -1.07
CHRNA1-203ENST00000409219 TRAV8-3A0A0A6YYJ7 113 aa8.36□□□□□ -1.07
CHRNA1-203ENST00000409219 FABP4P15090 132 aa8.36□□□□□ -1.07
CHRNA1-203ENST00000409219 PDZD11Q5EBL8 140 aa8.36□□□□□ -1.07
CHRNA1-203ENST00000409219 PYY3Q5JQD4 70 aa8.36□□□□□ -1.07
CHRNA1-203ENST00000409219 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
CHRNA1-203ENST00000409219 MRPL54Q6P161 138 aaKnown RBP8.36□□□□□ -1.07
CHRNA1-203ENST00000409219 ZC2HC1AQ96GY0 325 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms