RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 A0A087WX48 190 aa8□□□□□ -1.13
APOBEC3B-204ENST00000407298 A0A1B0GVG6 124 aa8□□□□□ -1.13
APOBEC3B-204ENST00000407298 NIT1Q86X76 327 aa8□□□□□ -1.13
APOBEC3B-204ENST00000407298 BAGE2Q86Y30 109 aa8□□□□□ -1.13
APOBEC3B-204ENST00000407298 C14orf178Q8N769 122 aaPredicted RBP8□□□□□ -1.13
APOBEC3B-204ENST00000407298 KLK12Q9UKR0 248 aa8□□□□□ -1.13
APOBEC3B-204ENST00000407298 TRBV20OR9-2A0A075B6H5 130 aa7.99□□□□□ -1.13
APOBEC3B-204ENST00000407298 CXCL1P09341 107 aa7.99□□□□□ -1.13
APOBEC3B-204ENST00000407298 CENPWQ5EE01 88 aa7.99□□□□□ -1.13
APOBEC3B-204ENST00000407298 UBE2WQ96B02 151 aa7.99□□□□□ -1.13
APOBEC3B-204ENST00000407298 SFRP2Q96HF1 295 aa7.99□□□□□ -1.13
APOBEC3B-204ENST00000407298 M0R381 172 aa7.98□□□□□ -1.13
APOBEC3B-204ENST00000407298 BCL2P10415 239 aa7.98□□□□□ -1.13
APOBEC3B-204ENST00000407298 MEF2BQ02080 365 aaPredicted RBP7.98□□□□□ -1.13
APOBEC3B-204ENST00000407298 PRR27Q6MZM9 219 aa7.98□□□□□ -1.13
APOBEC3B-204ENST00000407298 ATRAIDQ6UW56 229 aa7.98□□□□□ -1.13
APOBEC3B-204ENST00000407298 OR10AG1Q8NH19 301 aa7.98□□□□□ -1.13
APOBEC3B-204ENST00000407298 PHLDA3Q9Y5J5 127 aa7.98□□□□□ -1.13
APOBEC3B-204ENST00000407298 PKHD1L1Q86WI1 4243 aa7.98□□□□□ -1.13
APOBEC3B-204ENST00000407298 A0A087WWL8 130 aa7.97□□□□□ -1.13
APOBEC3B-204ENST00000407298 LOC100996750A0A140TA64 210 aa7.97□□□□□ -1.13
APOBEC3B-204ENST00000407298 RHODO00212 210 aa7.97□□□□□ -1.13
APOBEC3B-204ENST00000407298 SNAI2O43623 268 aa7.97□□□□□ -1.13
APOBEC3B-204ENST00000407298 FAM74A4Q5TZK3 123 aa7.97□□□□□ -1.13
APOBEC3B-204ENST00000407298 Q6ZRU5 148 aa7.97□□□□□ -1.13
APOBEC3B-204ENST00000407298 ZFP82Q8N141 532 aa7.97□□□□□ -1.13
APOBEC3B-204ENST00000407298 SSBP4Q9BWG4 385 aaPredicted RBP7.97□□□□□ -1.13
APOBEC3B-204ENST00000407298 C1orf43Q9BWL3 253 aa7.97□□□□□ -1.13
APOBEC3B-204ENST00000407298 KRTAP4-6Q9BYQ5 205 aa7.97□□□□□ -1.13
APOBEC3B-204ENST00000407298 RAB19A4D1S5 217 aa7.96□□□□□ -1.14
APOBEC3B-204ENST00000407298 C19orf71A6NCJ1 209 aa7.96□□□□□ -1.14
APOBEC3B-204ENST00000407298 NKX2-5P52952 324 aaPredicted RBP7.96□□□□□ -1.14
APOBEC3B-204ENST00000407298 ALKAL2Q6UX46 152 aa7.96□□□□□ -1.14
APOBEC3B-204ENST00000407298 DAZAP1Q96EP5 407 aaKnown RBP7.96□□□□□ -1.14
APOBEC3B-204ENST00000407298 TEX46H3BTG2 121 aa7.95□□□□□ -1.14
APOBEC3B-204ENST00000407298 PDE6DO43924 150 aa7.95□□□□□ -1.14
APOBEC3B-204ENST00000407298 OR5AL1P0C617 328 aa7.95□□□□□ -1.14
APOBEC3B-204ENST00000407298 DGAT2L7PQ6IED9 249 aa7.95□□□□□ -1.14
APOBEC3B-204ENST00000407298 MUC21A0A0G2JKD1 596 aa7.94□□□□□ -1.14
APOBEC3B-204ENST00000407298 MUC21A0A140T8X8 626 aa7.94□□□□□ -1.14
APOBEC3B-204ENST00000407298 IFNA1P01562 189 aa7.94□□□□□ -1.14
APOBEC3B-204ENST00000407298 CRPP02741 224 aa7.94□□□□□ -1.14
APOBEC3B-204ENST00000407298 IGLC6P0CF74 106 aa7.94□□□□□ -1.14
APOBEC3B-204ENST00000407298 GZMBP10144 247 aa7.94□□□□□ -1.14
APOBEC3B-204ENST00000407298 LYPD6BQ8NI32 183 aa7.94□□□□□ -1.14
APOBEC3B-204ENST00000407298 DNAJC30Q96LL9 226 aa7.94□□□□□ -1.14
APOBEC3B-204ENST00000407298 VAX2Q9UIW0 290 aa7.94□□□□□ -1.14
APOBEC3B-204ENST00000407298 TRBV10-1A0A0K0K1A3 114 aa7.93□□□□□ -1.14
APOBEC3B-204ENST00000407298 TMEM262E9PQX1 116 aa7.93□□□□□ -1.14
APOBEC3B-204ENST00000407298 GNG4P50150 75 aa7.93□□□□□ -1.14
APOBEC3B-204ENST00000407298 HNRNPA3P51991 378 aaKnown RBP7.93□□□□□ -1.14
APOBEC3B-204ENST00000407298 PKIAP61925 76 aa7.93□□□□□ -1.14
APOBEC3B-204ENST00000407298 RPL36AP83881 106 aaKnown RBP7.93□□□□□ -1.14
APOBEC3B-204ENST00000407298 RPL36ALQ969Q0 106 aaKnown RBP7.93□□□□□ -1.14
APOBEC3B-204ENST00000407298 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
APOBEC3B-204ENST00000407298 MED9Q9NWA0 146 aa7.93□□□□□ -1.14
APOBEC3B-204ENST00000407298 KIF25-AS1Q9Y6Z4 181 aa7.93□□□□□ -1.14
APOBEC3B-204ENST00000407298 MT1HL1P0DM35 61 aa7.92□□□□□ -1.14
APOBEC3B-204ENST00000407298 OR10G8Q8NGN5 311 aa7.92□□□□□ -1.14
APOBEC3B-204ENST00000407298 USP17L23D6RBM5 183 aa7.91□□□□□ -1.14
APOBEC3B-204ENST00000407298 K7EN84 100 aa7.91□□□□□ -1.14
APOBEC3B-204ENST00000407298 TAGLN2P37802 199 aaKnown RBP7.91□□□□□ -1.14
APOBEC3B-204ENST00000407298 UBE2D3P61077 147 aa7.91□□□□□ -1.14
APOBEC3B-204ENST00000407298 UBE2D2P62837 147 aa7.91□□□□□ -1.14
APOBEC3B-204ENST00000407298 C9orf163Q8N9P6 203 aa7.91□□□□□ -1.14
APOBEC3B-204ENST00000407298 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.91□□□□□ -1.14
APOBEC3B-204ENST00000407298 OR2D3Q8NGH3 330 aa7.91□□□□□ -1.14
APOBEC3B-204ENST00000407298 DPH3P1Q9H4G8 78 aa7.91□□□□□ -1.14
APOBEC3B-204ENST00000407298 TRBV7-3A0A075B6L6 115 aa7.9□□□□□ -1.14
APOBEC3B-204ENST00000407298 RAB4BP61018 213 aa7.9□□□□□ -1.14
APOBEC3B-204ENST00000407298 MIAQ16674 131 aa7.9□□□□□ -1.14
APOBEC3B-204ENST00000407298 SPANXN1Q5VSR9 72 aa7.9□□□□□ -1.14
APOBEC3B-204ENST00000407298 ENHOQ6UWT2 76 aa7.9□□□□□ -1.14
APOBEC3B-204ENST00000407298 C15orf54Q8N8G6 183 aa7.9□□□□□ -1.14
APOBEC3B-204ENST00000407298 NEXN-AS1Q8NBZ9 246 aa7.9□□□□□ -1.14
APOBEC3B-204ENST00000407298 P01737 135 aa7.89□□□□□ -1.15
APOBEC3B-204ENST00000407298 HLA-DQA1P01909 254 aa7.89□□□□□ -1.15
APOBEC3B-204ENST00000407298 ANGP03950 147 aaKnown RBP7.89□□□□□ -1.15
APOBEC3B-204ENST00000407298 PRSS1P07477 247 aa7.89□□□□□ -1.15
APOBEC3B-204ENST00000407298 SSTP61278 116 aa7.89□□□□□ -1.15
APOBEC3B-204ENST00000407298 BLOC1S1P78537 153 aa7.89□□□□□ -1.15
APOBEC3B-204ENST00000407298 ZNF56Q15929 161 aa7.89□□□□□ -1.15
APOBEC3B-204ENST00000407298 FER1L6-AS1Q8NA97 138 aa7.89□□□□□ -1.15
APOBEC3B-204ENST00000407298 CLRN3Q8NCR9 226 aa7.89□□□□□ -1.15
APOBEC3B-204ENST00000407298 DPH3Q96FX2 82 aa7.89□□□□□ -1.15
APOBEC3B-204ENST00000407298 TRBV6-8A0A0A6YYG3 113 aa7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 TMEM250H0YL14 139 aa7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 CTRLP40313 264 aa7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 RPS20P60866 119 aaKnown RBP7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 NUDT10Q8NFP7 164 aa7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 OCC1Q8TAD7 63 aa7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 NUDT11Q96G61 164 aa7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 RNF185Q96GF1 192 aa7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 AP1S3Q96PC3 154 aa7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 TPPP3Q9BW30 176 aa7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 RNASE7Q9H1E1 156 aaKnown RBP7.88□□□□□ -1.15
APOBEC3B-204ENST00000407298 A6NJY4 79 aa7.87□□□□□ -1.15
APOBEC3B-204ENST00000407298 TMEM97Q5BJF2 176 aa7.87□□□□□ -1.15
APOBEC3B-204ENST00000407298 LYZL1Q6UWQ5 148 aa7.87□□□□□ -1.15
APOBEC3B-204ENST00000407298 SDIM1Q6ZPB5 146 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms