RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 DEFB135Q30KP9 77 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 WISP1O95388 367 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 LGALS9O00182 355 aa9.34□□□□□ -0.91
SMCR8-201ENST00000406438 GRNP28799 593 aaKnown RBP9.34□□□□□ -0.91
SMCR8-201ENST00000406438 TMEM263Q8WUH6 116 aaKnown RBP9.33□□□□□ -0.92
SMCR8-201ENST00000406438 I3L2K1 104 aa9.33□□□□□ -0.92
SMCR8-201ENST00000406438 SVIPQ8NHG7 77 aa9.33□□□□□ -0.92
SMCR8-201ENST00000406438 SPATA25Q9BR10 227 aa9.33□□□□□ -0.92
SMCR8-201ENST00000406438 FGF23Q9GZV9 251 aaPredicted RBP9.33□□□□□ -0.92
SMCR8-201ENST00000406438 A4D1N5 150 aa9.33□□□□□ -0.92
SMCR8-201ENST00000406438 K7EIM0 57 aa9.33□□□□□ -0.92
SMCR8-201ENST00000406438 GATA1P15976 413 aaPredicted RBP9.33□□□□□ -0.92
SMCR8-201ENST00000406438 DEFB125Q8N687 156 aa9.33□□□□□ -0.92
SMCR8-201ENST00000406438 NOTCH2Q04721 2471 aa9.32□□□□□ -0.92
SMCR8-201ENST00000406438 TOMM6Q96B49 74 aa9.32□□□□□ -0.92
SMCR8-201ENST00000406438 RNF183Q96D59 192 aa9.32□□□□□ -0.92
SMCR8-201ENST00000406438 FAM236AA0A1B0GUQ0 79 aa9.32□□□□□ -0.92
SMCR8-201ENST00000406438 FAM236BA0A1B0GV22 79 aa9.32□□□□□ -0.92
SMCR8-201ENST00000406438 KIR2DL5BQ8NHK3 375 aa9.32□□□□□ -0.92
SMCR8-201ENST00000406438 SPAG11BQ08648 103 aa9.32□□□□□ -0.92
SMCR8-201ENST00000406438 RITA1Q96K30 269 aa9.32□□□□□ -0.92
SMCR8-201ENST00000406438 KLK12Q9UKR0 248 aa9.32□□□□□ -0.92
SMCR8-201ENST00000406438 DAND5Q8N907 189 aa9.31□□□□□ -0.92
SMCR8-201ENST00000406438 B5MCH6 92 aa9.31□□□□□ -0.92
SMCR8-201ENST00000406438 TRBV12-3P01733 135 aa9.31□□□□□ -0.92
SMCR8-201ENST00000406438 SPRY2O43597 315 aa9.31□□□□□ -0.92
SMCR8-201ENST00000406438 INSL3P51460 131 aa9.31□□□□□ -0.92
SMCR8-201ENST00000406438 GPHB5Q86YW7 130 aa9.31□□□□□ -0.92
SMCR8-201ENST00000406438 C11orf53Q8IXP5 236 aa9.3□□□□□ -0.92
SMCR8-201ENST00000406438 TTC28Q96AY4 2481 aa9.3□□□□□ -0.92
SMCR8-201ENST00000406438 PDE6GP18545 87 aa9.3□□□□□ -0.92
SMCR8-201ENST00000406438 RPL39P62891 51 aaKnown RBP9.3□□□□□ -0.92
SMCR8-201ENST00000406438 K7EMT4 169 aa9.3□□□□□ -0.92
SMCR8-201ENST00000406438 Q8N9W7 124 aa9.3□□□□□ -0.92
SMCR8-201ENST00000406438 IGHV1-58A0A0C4DH39 117 aa9.29□□□□□ -0.92
SMCR8-201ENST00000406438 CTSGP08311 255 aa9.29□□□□□ -0.92
SMCR8-201ENST00000406438 TEN1Q86WV5 123 aa9.29□□□□□ -0.92
SMCR8-201ENST00000406438 Q8NFD4 153 aa9.29□□□□□ -0.92
SMCR8-201ENST00000406438 KIR2DL5BA0A0G2JN68 375 aa9.29□□□□□ -0.92
SMCR8-201ENST00000406438 KIR2DL5BA0A0G2JPC4 375 aa9.29□□□□□ -0.92
SMCR8-201ENST00000406438 K7ERS5 55 aa9.29□□□□□ -0.92
SMCR8-201ENST00000406438 KIR2DL5AQ8N109 375 aa9.29□□□□□ -0.92
SMCR8-201ENST00000406438 GTSF1Q8WW33 167 aa9.29□□□□□ -0.92
SMCR8-201ENST00000406438 DEFB4AO15263 64 aa9.28□□□□□ -0.92
SMCR8-201ENST00000406438 IGF2-ASQ6U949 168 aa9.28□□□□□ -0.92
SMCR8-201ENST00000406438 MED14OSP0DP75 135 aa9.28□□□□□ -0.92
SMCR8-201ENST00000406438 SPRNQ5BIV9 151 aa9.28□□□□□ -0.92
SMCR8-201ENST00000406438 C11orf45Q8TAV5 145 aa9.28□□□□□ -0.92
SMCR8-201ENST00000406438 TRBV10-2A0A0K0K1G8 114 aa9.28□□□□□ -0.92
SMCR8-201ENST00000406438 MYCNOSP40205 109 aa9.28□□□□□ -0.92
SMCR8-201ENST00000406438 C10orf105Q8TEF2 133 aa9.28□□□□□ -0.92
SMCR8-201ENST00000406438 SS18L2Q9UHA2 77 aa9.28□□□□□ -0.92
SMCR8-201ENST00000406438 A0A0J9YXV3 536 aa9.27□□□□□ -0.93
SMCR8-201ENST00000406438 LYPD6BQ8NI32 183 aa9.27□□□□□ -0.93
SMCR8-201ENST00000406438 ZNF524Q96C55 264 aa9.27□□□□□ -0.93
SMCR8-201ENST00000406438 C2CD3Q4AC94 2353 aa9.27□□□□□ -0.93
SMCR8-201ENST00000406438 C11orf86A6NJI1 115 aa9.27□□□□□ -0.93
SMCR8-201ENST00000406438 LECT2O14960 151 aa9.27□□□□□ -0.93
SMCR8-201ENST00000406438 TMEM89A2RUT3 159 aa9.27□□□□□ -0.93
SMCR8-201ENST00000406438 E9PLD3 99 aa9.27□□□□□ -0.93
SMCR8-201ENST00000406438 WI2-2373I1.2A0A1W2PRP0 233 aa9.26□□□□□ -0.93
SMCR8-201ENST00000406438 IGKV1-17P01599 117 aa9.26□□□□□ -0.93
SMCR8-201ENST00000406438 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
SMCR8-201ENST00000406438 IGFL2Q6UWQ7 119 aa9.26□□□□□ -0.93
SMCR8-201ENST00000406438 PIEZO2Q9H5I5 2752 aa9.26□□□□□ -0.93
SMCR8-201ENST00000406438 LRCOL1A6NCL2 159 aa9.26□□□□□ -0.93
SMCR8-201ENST00000406438 J3KT08 172 aa9.26□□□□□ -0.93
SMCR8-201ENST00000406438 CTRLP40313 264 aa9.26□□□□□ -0.93
SMCR8-201ENST00000406438 COX7BP24311 80 aa9.26□□□□□ -0.93
SMCR8-201ENST00000406438 HIGD1BQ9P298 99 aa9.25□□□□□ -0.93
SMCR8-201ENST00000406438 PRO0255Q9UI72 69 aa9.25□□□□□ -0.93
SMCR8-201ENST00000406438 TEX22C9J3V5 150 aa9.25□□□□□ -0.93
SMCR8-201ENST00000406438 MYO9AB2RTY4 2548 aa9.25□□□□□ -0.93
SMCR8-201ENST00000406438 CLEC2BQ92478 149 aa9.24□□□□□ -0.93
SMCR8-201ENST00000406438 FAM110AQ9BQ89 295 aa9.24□□□□□ -0.93
SMCR8-201ENST00000406438 CRYGBP07316 175 aa9.24□□□□□ -0.93
SMCR8-201ENST00000406438 NRGNQ92686 78 aa9.24□□□□□ -0.93
SMCR8-201ENST00000406438 USP17L23D6RBM5 183 aa9.24□□□□□ -0.93
SMCR8-201ENST00000406438 IGKV2-24A0A0C4DH68 120 aa9.23□□□□□ -0.93
SMCR8-201ENST00000406438 MDFICQ9P1T7 246 aa9.23□□□□□ -0.93
SMCR8-201ENST00000406438 TRBV10-1A0A0K0K1A3 114 aa9.23□□□□□ -0.93
SMCR8-201ENST00000406438 KRTAP27-1Q3LI81 207 aa9.23□□□□□ -0.93
SMCR8-201ENST00000406438 MSRB1Q9NZV6 116 aa9.23□□□□□ -0.93
SMCR8-201ENST00000406438 TRBV6-1A0A0K0K1D8 114 aa9.23□□□□□ -0.93
SMCR8-201ENST00000406438 ADORA2A-AS1P86434 159 aa9.23□□□□□ -0.93
SMCR8-201ENST00000406438 IGKV2D-26A0A0A0MRZ7 120 aa9.22□□□□□ -0.93
SMCR8-201ENST00000406438 FAM167A-AS1Q96KT0 104 aa9.22□□□□□ -0.93
SMCR8-201ENST00000406438 CRYGDP07320 174 aa9.22□□□□□ -0.93
SMCR8-201ENST00000406438 UPK3BQ9BT76 320 aa9.22□□□□□ -0.93
SMCR8-201ENST00000406438 DAZAP2Q15038 168 aaPredicted RBP9.22□□□□□ -0.93
SMCR8-201ENST00000406438 H3BT86 120 aa9.21□□□□□ -0.93
SMCR8-201ENST00000406438 BPY2O14599 106 aa9.21□□□□□ -0.93
SMCR8-201ENST00000406438 HILS1P60008 231 aa9.21□□□□□ -0.93
SMCR8-201ENST00000406438 ZFP36P26651 326 aaKnown RBP9.21□□□□□ -0.93
SMCR8-201ENST00000406438 NDUFA11Q86Y39 141 aa9.21□□□□□ -0.93
SMCR8-201ENST00000406438 FXYD2P54710 66 aa9.21□□□□□ -0.93
SMCR8-201ENST00000406438 TRAV26-1A0A087WT03 109 aa9.21□□□□□ -0.94
SMCR8-201ENST00000406438 FOXI1Q12951 378 aa9.21□□□□□ -0.94
SMCR8-201ENST00000406438 DNAJC9-AS1A6NH13 148 aa9.21□□□□□ -0.94
SMCR8-201ENST00000406438 ANKRD39Q53RE8 183 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms