RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 SPANXA1Q9NS26 97 aa11.26□□□□□ -0.61
ITSN1-210ENST00000399353 USP9YO00507 2555 aaPredicted RBP11.26□□□□□ -0.61
ITSN1-210ENST00000399353 IGLV4-69A0A075B6H9 119 aa11.25□□□□□ -0.61
ITSN1-210ENST00000399353 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
ITSN1-210ENST00000399353 M0R1W7 72 aa11.25□□□□□ -0.61
ITSN1-210ENST00000399353 THBDP07204 575 aa11.25□□□□□ -0.61
ITSN1-210ENST00000399353 ATP6V0E1O15342 81 aa11.25□□□□□ -0.61
ITSN1-210ENST00000399353 HIST1H4AP62805 103 aaKnown RBP11.25□□□□□ -0.61
ITSN1-210ENST00000399353 GRNP28799 593 aaKnown RBP11.25□□□□□ -0.61
ITSN1-210ENST00000399353 SUMO4Q6EEV6 95 aa11.25□□□□□ -0.61
ITSN1-210ENST00000399353 C3orf22Q8N5N4 141 aa11.24□□□□□ -0.61
ITSN1-210ENST00000399353 SPENQ96T58 3664 aaKnown RBP11.24□□□□□ -0.61
ITSN1-210ENST00000399353 Q6Q795 121 aa11.24□□□□□ -0.61
ITSN1-210ENST00000399353 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
ITSN1-210ENST00000399353 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
ITSN1-210ENST00000399353 TRACP01848 142 aa11.23□□□□□ -0.61
ITSN1-210ENST00000399353 BRD3OSQ6XYD6 125 aa11.23□□□□□ -0.61
ITSN1-210ENST00000399353 SBSPONQ8IVN8 264 aa11.23□□□□□ -0.61
ITSN1-210ENST00000399353 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
ITSN1-210ENST00000399353 RNF5Q99942 180 aa11.23□□□□□ -0.61
ITSN1-210ENST00000399353 RAI1Q7Z5J4 1906 aaPredicted RBP11.23□□□□□ -0.61
ITSN1-210ENST00000399353 TRAV12-2A0A075B6T6 113 aa11.23□□□□□ -0.61
ITSN1-210ENST00000399353 I3L3M4 83 aa11.23□□□□□ -0.61
ITSN1-210ENST00000399353 LEPROTO15243 131 aa11.23□□□□□ -0.61
ITSN1-210ENST00000399353 TSHBP01222 138 aa11.23□□□□□ -0.61
ITSN1-210ENST00000399353 DNAJC30Q96LL9 226 aa11.23□□□□□ -0.61
ITSN1-210ENST00000399353 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
ITSN1-210ENST00000399353 IGHV3-30-3P0DP02 117 aa11.22□□□□□ -0.61
ITSN1-210ENST00000399353 TNRC18O15417 2968 aaPredicted RBP11.22□□□□□ -0.61
ITSN1-210ENST00000399353 A0A1B0GX51 115 aa11.21□□□□□ -0.61
ITSN1-210ENST00000399353 LINC01587Q99440 93 aa11.21□□□□□ -0.61
ITSN1-210ENST00000399353 A0A0B4J2C4 111 aa11.21□□□□□ -0.61
ITSN1-210ENST00000399353 DNAL4O96015 105 aa11.21□□□□□ -0.61
ITSN1-210ENST00000399353 CIRBPQ14011 172 aaKnown RBP11.21□□□□□ -0.61
ITSN1-210ENST00000399353 SDIM1Q6ZPB5 146 aa11.21□□□□□ -0.61
ITSN1-210ENST00000399353 UQCRQO14949 82 aa11.21□□□□□ -0.62
ITSN1-210ENST00000399353 P0DMU3 169 aa11.21□□□□□ -0.62
ITSN1-210ENST00000399353 FAM231AP0DMU4 169 aa11.21□□□□□ -0.62
ITSN1-210ENST00000399353 FAM231CP0DMU5 169 aa11.21□□□□□ -0.62
ITSN1-210ENST00000399353 DSCR8Q96T75 97 aa11.21□□□□□ -0.62
ITSN1-210ENST00000399353 NXPH4O95158 308 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 NRGNQ92686 78 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 KAAG1Q9UBP8 84 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 USP9XQ93008 2570 aaPredicted RBP11.2□□□□□ -0.62
ITSN1-210ENST00000399353 IGHV3OR16-12A0A075B7B8 117 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 F8W735 103 aaPredicted RBP11.2□□□□□ -0.62
ITSN1-210ENST00000399353 H3BT86 120 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 BAALC-AS2P0C853 105 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 ZNF575Q86XF7 245 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 TMEM190Q8WZ59 177 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 KLK9Q9UKQ9 250 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 PLA2G2CQ5R387 149 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 CCDC168Q8NDH2 2452 aa11.2□□□□□ -0.62
ITSN1-210ENST00000399353 Q9HAA7 133 aa11.19□□□□□ -0.62
ITSN1-210ENST00000399353 CHD8Q9HCK8 2581 aa11.19□□□□□ -0.62
ITSN1-210ENST00000399353 HRCT1Q6UXD1 115 aa11.19□□□□□ -0.62
ITSN1-210ENST00000399353 IGKV3OR2-268A0A0C4DH90 116 aa11.19□□□□□ -0.62
ITSN1-210ENST00000399353 LINC01546A6NGU7 62 aa11.19□□□□□ -0.62
ITSN1-210ENST00000399353 SAA4P35542 130 aa11.19□□□□□ -0.62
ITSN1-210ENST00000399353 C8orf31Q8N9H6 132 aa11.19□□□□□ -0.62
ITSN1-210ENST00000399353 CLPSL1A2RUU4 121 aa11.18□□□□□ -0.62
ITSN1-210ENST00000399353 IGHV1-69DA0A0B4J2H0 117 aa11.18□□□□□ -0.62
ITSN1-210ENST00000399353 IGIPA6NJ69 53 aa11.18□□□□□ -0.62
ITSN1-210ENST00000399353 RNF152Q8N8N0 203 aa11.18□□□□□ -0.62
ITSN1-210ENST00000399353 IGHV3-38A0A0C4DH36 116 aa11.17□□□□□ -0.62
ITSN1-210ENST00000399353 TRBV30A0A0K0K1B3 111 aa11.17□□□□□ -0.62
ITSN1-210ENST00000399353 SRSF2Q01130 221 aaKnown RBP11.17□□□□□ -0.62
ITSN1-210ENST00000399353 ADAMTSL4-AS1Q5T5F5 129 aa11.17□□□□□ -0.62
ITSN1-210ENST00000399353 C20orf173Q96LM9 149 aa11.17□□□□□ -0.62
ITSN1-210ENST00000399353 DAZ2Q13117 558 aaKnown RBP11.17□□□□□ -0.62
ITSN1-210ENST00000399353 DAZ4Q86SG3 579 aaKnown RBP11.17□□□□□ -0.62
ITSN1-210ENST00000399353 DAZ1Q9NQZ3 744 aaKnown RBP11.17□□□□□ -0.62
ITSN1-210ENST00000399353 DAZ3Q9NR90 486 aaKnown RBP11.17□□□□□ -0.62
ITSN1-210ENST00000399353 DMXL1Q9Y485 3027 aa11.17□□□□□ -0.62
ITSN1-210ENST00000399353 SYNJ2BPP57105 145 aa11.17□□□□□ -0.62
ITSN1-210ENST00000399353 IGFL2Q6UWQ7 119 aa11.17□□□□□ -0.62
ITSN1-210ENST00000399353 IGHV7-81A0A0B4J1V7 117 aa11.16□□□□□ -0.62
ITSN1-210ENST00000399353 TINCRA0A1B0GVN0 87 aa11.16□□□□□ -0.62
ITSN1-210ENST00000399353 C9orf139Q6ZV77 190 aa11.16□□□□□ -0.62
ITSN1-210ENST00000399353 EIF4EBP3O60516 100 aaPredicted RBP11.16□□□□□ -0.62
ITSN1-210ENST00000399353 TMEM223A0PJW6 202 aa11.16□□□□□ -0.62
ITSN1-210ENST00000399353 LY6G5BQ8NDX9 201 aa11.16□□□□□ -0.62
ITSN1-210ENST00000399353 PEMTQ9UBM1 199 aa11.16□□□□□ -0.62
ITSN1-210ENST00000399353 MUC3AQ02505 3323 aa11.15□□□□□ -0.62
ITSN1-210ENST00000399353 C9orf47Q6ZRZ4 202 aa11.15□□□□□ -0.62
ITSN1-210ENST00000399353 KIR2DL5BQ8NHK3 375 aa11.15□□□□□ -0.62
ITSN1-210ENST00000399353 TIMM17AQ99595 171 aa11.15□□□□□ -0.62
ITSN1-210ENST00000399353 LINC00643Q86TS7 51 aa11.15□□□□□ -0.62
ITSN1-210ENST00000399353 GPHB5Q86YW7 130 aa11.15□□□□□ -0.62
ITSN1-210ENST00000399353 TOMM7Q9P0U1 55 aa11.15□□□□□ -0.63
ITSN1-210ENST00000399353 MYO18BQ8IUG5 2567 aa11.14□□□□□ -0.63
ITSN1-210ENST00000399353 COX8CQ7Z4L0 72 aa11.14□□□□□ -0.63
ITSN1-210ENST00000399353 OVOL1O14753 267 aa11.14□□□□□ -0.63
ITSN1-210ENST00000399353 ZFAND2AQ8N6M9 145 aa11.14□□□□□ -0.63
ITSN1-210ENST00000399353 C1orf43Q9BWL3 253 aa11.13□□□□□ -0.63
ITSN1-210ENST00000399353 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.13□□□□□ -0.63
ITSN1-210ENST00000399353 A0A087WVE0 104 aa11.13□□□□□ -0.63
ITSN1-210ENST00000399353 IGKV2-29A2NJV5 120 aaPredicted RBP11.13□□□□□ -0.63
ITSN1-210ENST00000399353 RHPN1-AS1Q9BWJ2 59 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms