RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 C17orf77Q96MU5 243 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 CD59P13987 128 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 EIF4EBP1Q13541 118 aaPredicted RBP7.39□□□□□ -1.23
SMAD9-203ENST00000399275 WFDC10AQ9H1F0 79 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 A0A0J9YXY3 114 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 NACAE9PAV3 2078 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 IGHV3-30-3P0DP02 117 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 Q8N9L7 120 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 SHANK1Q9Y566 2161 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 RPL39P62891 51 aaKnown RBP7.38□□□□□ -1.23
SMAD9-203ENST00000399275 POLEQ07864 2286 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 MIR7-3HGQ8N6C7 128 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 WNK2Q9Y3S1 2297 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 ESRGQ1W209 222 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 SPINK13Q1W4C9 94 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 LENEPQ9Y5L5 61 aa7.38□□□□□ -1.23
SMAD9-203ENST00000399275 IGHV7-4-1A0A0J9YVY3 117 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 LINC01619G3V211 115 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 CMC4P56277 68 aaPredicted RBP7.37□□□□□ -1.23
SMAD9-203ENST00000399275 NFE4Q86UQ8 179 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 MAPKAPK5-AS1Q8N8E1 139 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 DIRC1Q969H9 104 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 A0A0J9YY99 117 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 KAAG1Q9UBP8 84 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 BRWD1-AS2P59051 145 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 THADAQ6YHU6 1953 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 I3L2K1 104 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 LST1O00453 97 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 DIAPH2-AS1Q14236 149 aa7.37□□□□□ -1.23
SMAD9-203ENST00000399275 PRYO14603 147 aa7.36□□□□□ -1.23
SMAD9-203ENST00000399275 A0A087WVE0 104 aa7.36□□□□□ -1.23
SMAD9-203ENST00000399275 FAM222AQ5U5X8 452 aa7.36□□□□□ -1.23
SMAD9-203ENST00000399275 CELA1Q9UNI1 258 aa7.36□□□□□ -1.23
SMAD9-203ENST00000399275 DEFB130BP0DP73 79 aa7.36□□□□□ -1.23
SMAD9-203ENST00000399275 DEFB130AP0DP74 79 aa7.36□□□□□ -1.23
SMAD9-203ENST00000399275 RNF114Q9Y508 228 aa7.36□□□□□ -1.23
SMAD9-203ENST00000399275 PLAC8L1A1L4L8 177 aa7.36□□□□□ -1.23
SMAD9-203ENST00000399275 K7ENP7 123 aa7.36□□□□□ -1.23
SMAD9-203ENST00000399275 APRG1Q8IVJ8 170 aa7.36□□□□□ -1.23
SMAD9-203ENST00000399275 PKDREJQ9NTG1 2253 aa7.35□□□□□ -1.23
SMAD9-203ENST00000399275 H7C423 109 aa7.35□□□□□ -1.23
SMAD9-203ENST00000399275 LINC00310P59036 64 aa7.35□□□□□ -1.23
SMAD9-203ENST00000399275 CADP27708 2225 aa7.35□□□□□ -1.23
SMAD9-203ENST00000399275 ZNF407Q9C0G0 2248 aa7.35□□□□□ -1.23
SMAD9-203ENST00000399275 SLPIP03973 132 aa7.35□□□□□ -1.23
SMAD9-203ENST00000399275 ZNF22P17026 224 aaPredicted RBP7.35□□□□□ -1.23
SMAD9-203ENST00000399275 IGHV1-69P01742 117 aa7.34□□□□□ -1.23
SMAD9-203ENST00000399275 PLA2G5P39877 138 aa7.34□□□□□ -1.23
SMAD9-203ENST00000399275 NRACQ8N912 160 aa7.34□□□□□ -1.23
SMAD9-203ENST00000399275 GNRH2O43555 120 aa7.34□□□□□ -1.23
SMAD9-203ENST00000399275 PSCAO43653 123 aa7.34□□□□□ -1.23
SMAD9-203ENST00000399275 CRYGAP11844 174 aa7.34□□□□□ -1.23
SMAD9-203ENST00000399275 A0A0G2JNJ9 132 aa7.34□□□□□ -1.23
SMAD9-203ENST00000399275 IGKV1-17P01599 117 aa7.34□□□□□ -1.23
SMAD9-203ENST00000399275 ANGP03950 147 aaKnown RBP7.34□□□□□ -1.23
SMAD9-203ENST00000399275 C4orf48Q5BLP8 95 aa7.34□□□□□ -1.23
SMAD9-203ENST00000399275 Q9UFV3 132 aa7.34□□□□□ -1.23
SMAD9-203ENST00000399275 WFDC10BQ8IUB3 73 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 IGLV2-23P01705 113 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 CRYGDP07320 174 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 COL8A2P25067 703 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 CLPSL2Q6UWE3 100 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 C9orf47Q6ZRZ4 202 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 CDIP1Q9H305 208 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 SAA4P35542 130 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 Q8N6K4 173 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 MDFIQ99750 246 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 IGKV1D-37A0A075B6S9 117 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 A0A0J9YWU9 116 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 K7EIM0 57 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 ATP6V0E1O15342 81 aa7.33□□□□□ -1.24
SMAD9-203ENST00000399275 LINC00322Q6ZN03 302 aaPredicted RBP7.33□□□□□ -1.24
SMAD9-203ENST00000399275 TMEM131Q92545 1883 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 NOTCH3Q9UM47 2321 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 NDUFA4O00483 81 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 DEFB131AP59861 70 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 CFHR3Q02985 330 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 E7EQL1 145 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 C1orf158Q8N1D5 194 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 DSCAML1Q8TD84 2053 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 TRBV7-7A0A0K0K1E9 115 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 AJUBAQ96IF1 538 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 U3KQK5 164 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 LTBP2Q14767 1821 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 COX7BP24311 80 aa7.32□□□□□ -1.24
SMAD9-203ENST00000399275 IL17DQ8TAD2 202 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 GTF3C1Q12789 2109 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 TRBV10-1A0A0K0K1A3 114 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 OVOL3O00110 214 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 IGHV3-30P01768 117 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 IGHV3-30-5P0DP03 117 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 CCL19Q99731 98 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 LIMD2Q9BT23 127 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 C7orf69Q9H7B7 122 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 FAM30AQ9NZY2 134 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 NPBQ8NG41 125 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 RMI2Q96E14 147 aa7.31□□□□□ -1.24
SMAD9-203ENST00000399275 WT1P19544 449 aaPredicted RBP7.3□□□□□ -1.24
SMAD9-203ENST00000399275 BEAN1Q3B7T3 259 aa7.3□□□□□ -1.24
SMAD9-203ENST00000399275 NUP210LQ5VU65 1888 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms