RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 KIR2DL4Q99706 377 aa10.73□□□□□ -0.69
CCDC144A-205ENST00000399264 TAL2Q16559 108 aa10.73□□□□□ -0.69
CCDC144A-205ENST00000399264 RRN3P1Q2M238 152 aa10.73□□□□□ -0.69
CCDC144A-205ENST00000399264 FLNAP21333 2647 aaKnown RBP10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 A0A096LNT2 108 aa10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 KRTAP10-9P60411 292 aa10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 SNRPD3P62318 126 aaKnown RBP10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 SRSF9Q13242 221 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 ZNF876PQ49A33 203 aa10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 SETXQ7Z333 2677 aaKnown RBP10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 PMVKQ15126 192 aa10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 ETDBQ3ZM63 59 aa10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 PGPEP1Q9NXJ5 209 aa10.72□□□□□ -0.69
CCDC144A-205ENST00000399264 IGHV1OR15-1A0A075B7D0 117 aa10.71□□□□□ -0.69
CCDC144A-205ENST00000399264 PPP1R17O96001 155 aa10.71□□□□□ -0.69
CCDC144A-205ENST00000399264 SLURP1P55000 103 aa10.71□□□□□ -0.69
CCDC144A-205ENST00000399264 LINC01356Q8N9X3 169 aa10.71□□□□□ -0.69
CCDC144A-205ENST00000399264 ZNF580Q9UK33 172 aa10.71□□□□□ -0.69
CCDC144A-205ENST00000399264 TRBV27A0A0K0K1C4 114 aa10.71□□□□□ -0.69
CCDC144A-205ENST00000399264 LGALS9O00182 355 aa10.71□□□□□ -0.69
CCDC144A-205ENST00000399264 APOMO95445 188 aa10.71□□□□□ -0.69
CCDC144A-205ENST00000399264 LINC01549A6NIU2 74 aa10.71□□□□□ -0.7
CCDC144A-205ENST00000399264 INSL3P51460 131 aa10.71□□□□□ -0.7
CCDC144A-205ENST00000399264 HOXA3O43365 443 aaPredicted RBP10.7□□□□□ -0.7
CCDC144A-205ENST00000399264 CR1P17927 2039 aa10.69□□□□□ -0.7
CCDC144A-205ENST00000399264 A0A0J9YY99 117 aa10.69□□□□□ -0.7
CCDC144A-205ENST00000399264 A0A1B0GWB2 263 aa10.69□□□□□ -0.7
CCDC144A-205ENST00000399264 TCTEX1D4Q5JR98 221 aa10.69□□□□□ -0.7
CCDC144A-205ENST00000399264 CEMP1Q6PRD7 247 aaPredicted RBP10.69□□□□□ -0.7
CCDC144A-205ENST00000399264 ZNF702PQ9H963 129 aa10.69□□□□□ -0.7
CCDC144A-205ENST00000399264 COTL1Q14019 142 aa10.69□□□□□ -0.7
CCDC144A-205ENST00000399264 RNASE13Q5GAN3 156 aaKnown RBP10.68□□□□□ -0.7
CCDC144A-205ENST00000399264 SPANXB1Q9NS25 103 aaPredicted RBP10.68□□□□□ -0.7
CCDC144A-205ENST00000399264 MRPL16Q9NX20 251 aaKnown RBP10.68□□□□□ -0.7
CCDC144A-205ENST00000399264 DEFB131AP59861 70 aa10.67□□□□□ -0.7
CCDC144A-205ENST00000399264 RPL32P62910 135 aaKnown RBP10.67□□□□□ -0.7
CCDC144A-205ENST00000399264 AMELXQ99217 191 aa10.67□□□□□ -0.7
CCDC144A-205ENST00000399264 PRO0461Q9UI25 63 aa10.67□□□□□ -0.7
CCDC144A-205ENST00000399264 VPREB3Q9UKI3 123 aa10.67□□□□□ -0.7
CCDC144A-205ENST00000399264 RBMY1BA6NDE4 496 aaKnown RBP10.67□□□□□ -0.7
CCDC144A-205ENST00000399264 RBMY1EA6NEQ0 496 aaKnown RBP10.67□□□□□ -0.7
CCDC144A-205ENST00000399264 RBMY1DP0C7P1 496 aaKnown RBP10.67□□□□□ -0.7
CCDC144A-205ENST00000399264 TRBV6-5A0A0K0K1A5 114 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 TIMM17AQ99595 171 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 LOC107984156A0A0G2JMH3 177 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 A0A0J9YXV3 536 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 GATA3P23771 443 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 Q6ZSN1 163 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 ARL17AQ8IVW1 177 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 BBC3Q96PG8 261 aaPredicted RBP10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 LINC01619G3V211 115 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 TSPAN13O95857 204 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 UBE2D1P51668 147 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 GAGE13Q4V321 117 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 SYT8Q8NBV8 401 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 TMEM141Q96I45 108 aa10.66□□□□□ -0.7
CCDC144A-205ENST00000399264 ADARB2-AS1A8MUL3 147 aa10.65□□□□□ -0.7
CCDC144A-205ENST00000399264 SPAG8Q99932 426 aaPredicted RBP10.65□□□□□ -0.71
CCDC144A-205ENST00000399264 TENM4Q6N022 2769 aa10.65□□□□□ -0.71
CCDC144A-205ENST00000399264 F8W1H4 67 aa10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 J3QQQ9 107 aa10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 Q6YL49 198 aa10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 C20orf203Q8NBC4 194 aa10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 FAM104AQ969W3 186 aa10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 ODF3Q96PU9 254 aa10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 ITPR2Q14571 2701 aa10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 SMCPP49901 116 aaPredicted RBP10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 KHDC1LQ5JSQ8 128 aa10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 PTH2Q96A98 100 aa10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 GTSF1LQ9H1H1 148 aa10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 TSSC4Q9Y5U2 329 aaPredicted RBP10.64□□□□□ -0.71
CCDC144A-205ENST00000399264 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
CCDC144A-205ENST00000399264 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
CCDC144A-205ENST00000399264 TRPT1Q86TN4 253 aaKnown RBP10.63□□□□□ -0.71
CCDC144A-205ENST00000399264 TMEM61Q8N0U2 210 aa10.63□□□□□ -0.71
CCDC144A-205ENST00000399264 UBE2E2Q96LR5 201 aa10.63□□□□□ -0.71
CCDC144A-205ENST00000399264 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
CCDC144A-205ENST00000399264 CFC1P0CG37 223 aa10.63□□□□□ -0.71
CCDC144A-205ENST00000399264 IGHV4-31P0DP07 118 aa10.63□□□□□ -0.71
CCDC144A-205ENST00000399264 PSMB2P49721 201 aa10.63□□□□□ -0.71
CCDC144A-205ENST00000399264 HERVK_113P61574 105 aa10.63□□□□□ -0.71
CCDC144A-205ENST00000399264 IGLV4-3A0A075B6K6 122 aa10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 EIF4EBP3O60516 100 aaPredicted RBP10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 DSCR9P59020 149 aa10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 SAMD13Q5VXD3 122 aa10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 NDUFA11Q86Y39 141 aa10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 C11orf44Q8N8P7 122 aa10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 I3L3M4 83 aa10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 SLC25A29Q8N8R3 303 aa10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 ZNF418Q8TF45 676 aaPredicted RBP10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 ELANEP08246 267 aa10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 ZNF22P17026 224 aaPredicted RBP10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 NSUN5P1Q3KNT7 163 aa10.62□□□□□ -0.71
CCDC144A-205ENST00000399264 IGHV3-38A0A0C4DH36 116 aa10.61□□□□□ -0.71
CCDC144A-205ENST00000399264 A8MZ25 164 aa10.61□□□□□ -0.71
CCDC144A-205ENST00000399264 H3BMM0 161 aa10.61□□□□□ -0.71
CCDC144A-205ENST00000399264 SPXQ9BT56 116 aa10.61□□□□□ -0.71
CCDC144A-205ENST00000399264 PAPPA-AS1Q5QFB9 102 aa10.61□□□□□ -0.71
CCDC144A-205ENST00000399264 TRAV8-3A0A0A6YYJ7 113 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms