RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 RNASE1P07998 156 aaKnown RBP8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 GAGE12FP0CL80 117 aa8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 GAGE12GP0CL81 117 aa8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 GAGE12IP0CL82 117 aa8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 MED14OSP0DP75 135 aa8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 GNLYP22749 145 aa8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 ZNF415Q09FC8 603 aa8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 GAGE4Q13068 117 aa8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 MAPK1IP1LQ8NDC0 245 aa8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 UBE2E2Q96LR5 201 aa8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 USP9XQ93008 2570 aaPredicted RBP8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 SETD2Q9BYW2 2564 aaPredicted RBP8.38□□□□□ -1.07
CSGALNACT1-202ENST00000397998 IGHV4-61A0A0C4DH41 118 aa8.37□□□□□ -1.07
CSGALNACT1-202ENST00000397998 IGHV4-4A0A075B6R2 117 aa8.37□□□□□ -1.07
CSGALNACT1-202ENST00000397998 RHODO00212 210 aa8.37□□□□□ -1.07
CSGALNACT1-202ENST00000397998 CDSNQ15517 529 aa8.37□□□□□ -1.07
CSGALNACT1-202ENST00000397998 TLN2Q9Y4G6 2542 aa8.37□□□□□ -1.07
CSGALNACT1-202ENST00000397998 TRGV1A0A0A0MS02 117 aa8.37□□□□□ -1.07
CSGALNACT1-202ENST00000397998 FBXL19-AS1Q494R0 122 aa8.37□□□□□ -1.07
CSGALNACT1-202ENST00000397998 HIVEP3Q5T1R4 2406 aa8.37□□□□□ -1.07
CSGALNACT1-202ENST00000397998 MSMBP08118 114 aa8.37□□□□□ -1.07
CSGALNACT1-202ENST00000397998 PRSS47A8MTI9 375 aa8.36□□□□□ -1.07
CSGALNACT1-202ENST00000397998 LMO4P61968 165 aa8.36□□□□□ -1.07
CSGALNACT1-202ENST00000397998 C20orf203Q8NBC4 194 aa8.36□□□□□ -1.07
CSGALNACT1-202ENST00000397998 TMEM101Q96IK0 257 aa8.36□□□□□ -1.07
CSGALNACT1-202ENST00000397998 A0A1W2PRX2 142 aa8.36□□□□□ -1.07
CSGALNACT1-202ENST00000397998 B4DSR2 109 aa8.36□□□□□ -1.07
CSGALNACT1-202ENST00000397998 IGHV3-30P01768 117 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 P0DMU3 169 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 FAM231AP0DMU4 169 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 FAM231CP0DMU5 169 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 IGHV3-30-3P0DP02 117 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 IGHV3-30-5P0DP03 117 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 CLEC2BQ92478 149 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 PSMG3-AS1Q96PY0 264 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 TRGV2A0A075B6R0 118 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 TEX49A0A1B0GTD5 131 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 XCL2Q9UBD3 114 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 ICOSQ9Y6W8 199 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 CHD8Q9HCK8 2581 aa8.35□□□□□ -1.07
CSGALNACT1-202ENST00000397998 STHQ8IWL8 128 aa8.34□□□□□ -1.07
CSGALNACT1-202ENST00000397998 ZNRF2Q8NHG8 242 aa8.34□□□□□ -1.07
CSGALNACT1-202ENST00000397998 IGHV3-33P01772 117 aa8.34□□□□□ -1.07
CSGALNACT1-202ENST00000397998 IGHV4-59P01825 116 aa8.34□□□□□ -1.07
CSGALNACT1-202ENST00000397998 UBE2D1P51668 147 aa8.34□□□□□ -1.07
CSGALNACT1-202ENST00000397998 LINC00158P58513 81 aa8.34□□□□□ -1.07
CSGALNACT1-202ENST00000397998 NFE4Q86UQ8 179 aa8.34□□□□□ -1.07
CSGALNACT1-202ENST00000397998 H3BUA1 57 aa8.34□□□□□ -1.07
CSGALNACT1-202ENST00000397998 ZNF22P17026 224 aaPredicted RBP8.34□□□□□ -1.07
CSGALNACT1-202ENST00000397998 CCDC168Q8NDH2 2452 aa8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 A0A0J9YXY3 114 aa8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 LINC01619G3V211 115 aa8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 IGHG2P01859 326 aa8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 RPL36AP83881 106 aaKnown RBP8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 C3orf56Q8N813 242 aa8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 RPL36ALQ969Q0 106 aaKnown RBP8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 PEMTQ9UBM1 199 aa8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 SONP18583 2426 aaKnown RBP8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 POLR2KP53803 58 aaKnown RBP8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 Q9H8V8 135 aa8.33□□□□□ -1.08
CSGALNACT1-202ENST00000397998 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
CSGALNACT1-202ENST00000397998 C11orf71Q6IPW1 123 aa8.32□□□□□ -1.08
CSGALNACT1-202ENST00000397998 COL6A3P12111 3177 aa8.32□□□□□ -1.08
CSGALNACT1-202ENST00000397998 DEFB136Q30KP8 78 aa8.32□□□□□ -1.08
CSGALNACT1-202ENST00000397998 U3KQE9 123 aa8.32□□□□□ -1.08
CSGALNACT1-202ENST00000397998 BOD1L1Q8NFC6 3051 aa8.32□□□□□ -1.08
CSGALNACT1-202ENST00000397998 CRPP02741 224 aa8.32□□□□□ -1.08
CSGALNACT1-202ENST00000397998 SMIM20Q8N5G0 67 aa8.32□□□□□ -1.08
CSGALNACT1-202ENST00000397998 C11orf68Q9H3H3 251 aaKnown RBP8.32□□□□□ -1.08
CSGALNACT1-202ENST00000397998 IGIPA6NJ69 53 aa8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 GPHB5Q86YW7 130 aa8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 A0A0J9YX75 114 aa8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 CRIP2P52943 208 aaPredicted RBP8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 IGLV4-3A0A075B6K6 122 aa8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 IGHV4OR15-8A0A075B7B6 117 aa8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 A0A087WW49 117 aa8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 TMEM223A0PJW6 202 aa8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 A8MZ25 164 aa8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 M0QY20 66 aa8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 HOXD3P31249 432 aaPredicted RBP8.31□□□□□ -1.08
CSGALNACT1-202ENST00000397998 IGLV4-69A0A075B6H9 119 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 TRBV27A0A0K0K1C4 114 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 DEFB112Q30KQ8 113 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 SPTBN4Q9H254 2564 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 A0A0B4J2C4 111 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 TRIAP1O43715 76 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 INSP01308 110 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 CHCHD5Q9BSY4 110 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 IGHV4-30-2A0A087WSY4 118 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 RS1O15537 224 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 PAX4O43316 350 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 EDN2P20800 178 aa8.3□□□□□ -1.08
CSGALNACT1-202ENST00000397998 NAV2Q8IVL1 2488 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 IGHV1-58A0A0C4DH39 117 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 PROK1P58294 105 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 UBE2D3P61077 147 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 UBE2D2P62837 147 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 LINC01546A6NGU7 62 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms