RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 MUSTN1Q8IVN3 82 aa8.63□□□□□ -1.03
TTC28-201ENST00000397906 C12orf74Q32Q52 190 aa8.63□□□□□ -1.03
TTC28-201ENST00000397906 A0A1W2PPM0 123 aa8.63□□□□□ -1.03
TTC28-201ENST00000397906 CHKB-CPT1BH3BT56 60 aa8.63□□□□□ -1.03
TTC28-201ENST00000397906 SPATA25Q9BR10 227 aa8.63□□□□□ -1.03
TTC28-201ENST00000397906 BAALCQ8WXS3 180 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 ODF3BA8MYP8 253 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 SHANK1Q9Y566 2161 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 A0A096LNI7 61 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 CREBBPQ92793 2442 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 NDUFB1O75438 58 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 Q6ZSV7 163 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 LY6G6CO95867 125 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 CFC1BP0CG36 223 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 CFC1P0CG37 223 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 PRO3102Q9H379 93 aa8.62□□□□□ -1.03
TTC28-201ENST00000397906 LECT2O14960 151 aa8.61□□□□□ -1.03
TTC28-201ENST00000397906 PPDPFLQ8WWR9 84 aa8.61□□□□□ -1.03
TTC28-201ENST00000397906 LINC00173Q6ZV60 143 aa8.61□□□□□ -1.03
TTC28-201ENST00000397906 NCOA6Q14686 2063 aaPredicted RBP8.61□□□□□ -1.03
TTC28-201ENST00000397906 PRSS47A8MTI9 375 aa8.61□□□□□ -1.03
TTC28-201ENST00000397906 PCDH15Q96QU1 1955 aa8.61□□□□□ -1.03
TTC28-201ENST00000397906 NDUFS6O75380 124 aaKnown RBP8.61□□□□□ -1.03
TTC28-201ENST00000397906 B9D2Q9BPU9 175 aa8.61□□□□□ -1.03
TTC28-201ENST00000397906 FAM167A-AS1Q96KT0 104 aa8.61□□□□□ -1.03
TTC28-201ENST00000397906 OTOGLQ3ZCN5 2332 aa8.61□□□□□ -1.03
TTC28-201ENST00000397906 F8W1H4 67 aa8.61□□□□□ -1.03
TTC28-201ENST00000397906 REG3AQ06141 175 aa8.6□□□□□ -1.03
TTC28-201ENST00000397906 A0A087WZ39 114 aa8.6□□□□□ -1.03
TTC28-201ENST00000397906 H0Y9J4 135 aa8.6□□□□□ -1.03
TTC28-201ENST00000397906 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
TTC28-201ENST00000397906 HIGD2AQ9BW72 106 aa8.6□□□□□ -1.03
TTC28-201ENST00000397906 C20orf144Q9BQM9 153 aa8.6□□□□□ -1.03
TTC28-201ENST00000397906 C18orf65Q6ZTR6 163 aa8.6□□□□□ -1.03
TTC28-201ENST00000397906 DEFB114Q30KQ6 69 aa8.59□□□□□ -1.03
TTC28-201ENST00000397906 TRBV6-1A0A0K0K1D8 114 aa8.59□□□□□ -1.03
TTC28-201ENST00000397906 MIR7-3HGQ8N6C7 128 aa8.59□□□□□ -1.03
TTC28-201ENST00000397906 K7EP34 96 aa8.59□□□□□ -1.03
TTC28-201ENST00000397906 ANKRD29Q8N6D5 301 aa8.59□□□□□ -1.03
TTC28-201ENST00000397906 DSCAMO60469 2012 aa8.59□□□□□ -1.03
TTC28-201ENST00000397906 WFDC10AQ9H1F0 79 aa8.59□□□□□ -1.03
TTC28-201ENST00000397906 Q6ZUT4 128 aa8.59□□□□□ -1.03
TTC28-201ENST00000397906 BDP1A6H8Y1 2624 aa8.59□□□□□ -1.03
TTC28-201ENST00000397906 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
TTC28-201ENST00000397906 C14orf132Q9NPU4 83 aa8.58□□□□□ -1.04
TTC28-201ENST00000397906 HIVEP2P31629 2446 aa8.58□□□□□ -1.04
TTC28-201ENST00000397906 IL15RAQ13261 267 aa8.58□□□□□ -1.04
TTC28-201ENST00000397906 A4D1N5 150 aa8.58□□□□□ -1.04
TTC28-201ENST00000397906 C14orf177Q52M58 125 aa8.58□□□□□ -1.04
TTC28-201ENST00000397906 DIRC1Q969H9 104 aa8.58□□□□□ -1.04
TTC28-201ENST00000397906 ARHGAP21Q5T5U3 1957 aa8.57□□□□□ -1.04
TTC28-201ENST00000397906 FREM1Q5H8C1 2179 aa8.57□□□□□ -1.04
TTC28-201ENST00000397906 PLA2G2EQ9NZK7 142 aa8.57□□□□□ -1.04
TTC28-201ENST00000397906 GDF5OSQ5U4N7 250 aa8.57□□□□□ -1.04
TTC28-201ENST00000397906 Q6ZSR3 168 aa8.57□□□□□ -1.04
TTC28-201ENST00000397906 IFITM1P13164 125 aa8.57□□□□□ -1.04
TTC28-201ENST00000397906 C20orf173Q96LM9 149 aa8.57□□□□□ -1.04
TTC28-201ENST00000397906 TTTY13Q9BZ97 58 aa8.57□□□□□ -1.04
TTC28-201ENST00000397906 NREPQ16612 68 aa8.56□□□□□ -1.04
TTC28-201ENST00000397906 CXCL5P42830 114 aa8.56□□□□□ -1.04
TTC28-201ENST00000397906 FAM19A5Q7Z5A7 132 aaPredicted RBP8.56□□□□□ -1.04
TTC28-201ENST00000397906 IGF1P05019 195 aa8.56□□□□□ -1.04
TTC28-201ENST00000397906 TANC2Q9HCD6 1990 aa8.56□□□□□ -1.04
TTC28-201ENST00000397906 K7EP13 123 aa8.56□□□□□ -1.04
TTC28-201ENST00000397906 MRPL52Q86TS9 123 aaKnown RBP8.56□□□□□ -1.04
TTC28-201ENST00000397906 LYRM9A8MSI8 78 aa8.56□□□□□ -1.04
TTC28-201ENST00000397906 C5orf47Q569G3 176 aa8.56□□□□□ -1.04
TTC28-201ENST00000397906 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.56□□□□□ -1.04
TTC28-201ENST00000397906 CLEC2BQ92478 149 aa8.55□□□□□ -1.04
TTC28-201ENST00000397906 CHCHD10Q8WYQ3 142 aaPredicted RBP8.55□□□□□ -1.04
TTC28-201ENST00000397906 C10orf91Q5T1B1 145 aa8.55□□□□□ -1.04
TTC28-201ENST00000397906 SIVA1O15304 175 aa8.55□□□□□ -1.04
TTC28-201ENST00000397906 C11orf71Q6IPW1 123 aa8.55□□□□□ -1.04
TTC28-201ENST00000397906 C1orf229Q6ZS94 237 aaPredicted RBP8.55□□□□□ -1.04
TTC28-201ENST00000397906 LGALS9O00182 355 aa8.55□□□□□ -1.04
TTC28-201ENST00000397906 CDSNQ15517 529 aa8.55□□□□□ -1.04
TTC28-201ENST00000397906 ZFAND2AQ8N6M9 145 aa8.55□□□□□ -1.04
TTC28-201ENST00000397906 LINC01006Q8NI28 216 aa8.55□□□□□ -1.04
TTC28-201ENST00000397906 ZNF80P51504 273 aaPredicted RBP8.54□□□□□ -1.04
TTC28-201ENST00000397906 WFDC9Q8NEX5 89 aa8.54□□□□□ -1.04
TTC28-201ENST00000397906 IGKV3D-7A0A0C4DH55 119 aa8.54□□□□□ -1.04
TTC28-201ENST00000397906 Q6ZVH6 145 aa8.54□□□□□ -1.04
TTC28-201ENST00000397906 TNCP24821 2201 aa8.54□□□□□ -1.04
TTC28-201ENST00000397906 FAM19A1Q7Z5A9 133 aa8.54□□□□□ -1.04
TTC28-201ENST00000397906 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
TTC28-201ENST00000397906 ALPK3Q96L96 1907 aa8.54□□□□□ -1.04
TTC28-201ENST00000397906 OXLD1Q5BKU9 147 aa8.54□□□□□ -1.04
TTC28-201ENST00000397906 CTRLP40313 264 aa8.53□□□□□ -1.04
TTC28-201ENST00000397906 ZNF702PQ9H963 129 aa8.53□□□□□ -1.04
TTC28-201ENST00000397906 IGKV1D-37A0A075B6S9 117 aa8.53□□□□□ -1.04
TTC28-201ENST00000397906 MED12LQ86YW9 2145 aa8.53□□□□□ -1.04
TTC28-201ENST00000397906 MED14OSP0DP75 135 aa8.53□□□□□ -1.04
TTC28-201ENST00000397906 KIAA1549Q9HCM3 1950 aa8.53□□□□□ -1.04
TTC28-201ENST00000397906 NFE4Q86UQ8 179 aa8.52□□□□□ -1.04
TTC28-201ENST00000397906 Q6ZS46 218 aa8.52□□□□□ -1.05
TTC28-201ENST00000397906 H0YGX0 51 aa8.52□□□□□ -1.05
TTC28-201ENST00000397906 LINC00467Q9BRT7 94 aa8.52□□□□□ -1.05
TTC28-201ENST00000397906 NUPR1O60356 82 aa8.52□□□□□ -1.05
TTC28-201ENST00000397906 ANKRD39Q53RE8 183 aa8.52□□□□□ -1.05
TTC28-201ENST00000397906 TRBV10-1A0A0K0K1A3 114 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms