RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CNFNQ9BYD5 112 aa6.96□□□□□ -1.3
NDE1-201ENST00000396354 ORMDL2Q53FV1 153 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 C20orf78Q9BR46 151 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 CR1P17927 2039 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 IGHV3-16A0A0C4DH30 117 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 IGHV3-38A0A0C4DH36 116 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 SIVA1O15304 175 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 Q9UF83 564 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 PDZD2O15018 2839 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 A6NDX4 124 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 A8MZ25 164 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 MSMBP08118 114 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 KIR2DL4Q99706 377 aa6.95□□□□□ -1.3
NDE1-201ENST00000396354 DAZ1Q9NQZ3 744 aaKnown RBP6.95□□□□□ -1.3
NDE1-201ENST00000396354 ZNF876PQ49A33 203 aa6.94□□□□□ -1.3
NDE1-201ENST00000396354 FOXI2Q6ZQN5 318 aa6.94□□□□□ -1.3
NDE1-201ENST00000396354 SPAG8Q99932 426 aaPredicted RBP6.94□□□□□ -1.3
NDE1-201ENST00000396354 RBAKDNA6NC62 111 aa6.94□□□□□ -1.3
NDE1-201ENST00000396354 PHLDA1Q8WV24 401 aaPredicted RBP6.94□□□□□ -1.3
NDE1-201ENST00000396354 SPXQ9BT56 116 aa6.94□□□□□ -1.3
NDE1-201ENST00000396354 ZMAT4Q9H898 229 aa6.94□□□□□ -1.3
NDE1-201ENST00000396354 TSPEAR-AS2P59090 65 aa6.93□□□□□ -1.3
NDE1-201ENST00000396354 RRN3P1Q2M238 152 aa6.93□□□□□ -1.3
NDE1-201ENST00000396354 Q8N1Y9 231 aa6.93□□□□□ -1.3
NDE1-201ENST00000396354 SMPXQ9UHP9 88 aa6.93□□□□□ -1.3
NDE1-201ENST00000396354 U3KQE9 123 aa6.93□□□□□ -1.3
NDE1-201ENST00000396354 NEXN-AS1Q8NBZ9 246 aa6.93□□□□□ -1.3
NDE1-201ENST00000396354 CRIP2P52943 208 aaPredicted RBP6.93□□□□□ -1.3
NDE1-201ENST00000396354 C18orf65Q6ZTR6 163 aa6.93□□□□□ -1.3
NDE1-201ENST00000396354 COX8CQ7Z4L0 72 aa6.93□□□□□ -1.3
NDE1-201ENST00000396354 MRAP2Q96G30 205 aa6.93□□□□□ -1.3
NDE1-201ENST00000396354 SETXQ7Z333 2677 aaKnown RBP6.92□□□□□ -1.3
NDE1-201ENST00000396354 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 OVOL1O14753 267 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 TOMM6Q96B49 74 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 A0A1W2PRX2 142 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 E9PLD3 99 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 NDUFA4O00483 81 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 TSHBP01222 138 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 IGHG2P01859 326 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 DAND5Q8N907 189 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 SYT8Q8NBV8 401 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 ZNF625Q96I27 306 aaPredicted RBP6.92□□□□□ -1.3
NDE1-201ENST00000396354 TM2D2Q9BX73 214 aa6.92□□□□□ -1.3
NDE1-201ENST00000396354 A0A0J9YXV3 536 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 FAM223BA6NKX1 122 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 LGALS3P17931 250 aaKnown RBP6.91□□□□□ -1.3
NDE1-201ENST00000396354 DEFB112Q30KQ8 113 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 FAM223AQ8IWN6 122 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 ZNRF2Q8NHG8 242 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 TMEM190Q8WZ59 177 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 SPANXB1Q9NS25 103 aaPredicted RBP6.91□□□□□ -1.3
NDE1-201ENST00000396354 MORN3Q6PF18 240 aaPredicted RBP6.91□□□□□ -1.3
NDE1-201ENST00000396354 SIGMAR1Q99720 223 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 TRAV26-1A0A087WT03 109 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 TRAV8-3A0A0A6YYJ7 113 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 A0A1B0GV72 72 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 CRYGDP07320 174 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 CFHR3Q02985 330 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 Q6ZSV7 163 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 TRPT1Q86TN4 253 aaKnown RBP6.91□□□□□ -1.3
NDE1-201ENST00000396354 HIGD1BQ9P298 99 aa6.91□□□□□ -1.3
NDE1-201ENST00000396354 TRBV7-3A0A075B6L6 115 aa6.9□□□□□ -1.3
NDE1-201ENST00000396354 CRYBA4P53673 196 aa6.9□□□□□ -1.3
NDE1-201ENST00000396354 TSPAN13O95857 204 aa6.9□□□□□ -1.31
NDE1-201ENST00000396354 HERVK_113P61574 105 aa6.9□□□□□ -1.31
NDE1-201ENST00000396354 BAHCC1Q9P281 2608 aa6.9□□□□□ -1.31
NDE1-201ENST00000396354 J3QR89 54 aa6.89□□□□□ -1.31
NDE1-201ENST00000396354 SOCS3O14543 225 aa6.89□□□□□ -1.31
NDE1-201ENST00000396354 IGHV3-53P01767 116 aa6.89□□□□□ -1.31
NDE1-201ENST00000396354 ID1P41134 155 aa6.89□□□□□ -1.31
NDE1-201ENST00000396354 APRG1Q8IVJ8 170 aa6.89□□□□□ -1.31
NDE1-201ENST00000396354 IGLV1-40P01703 118 aa6.89□□□□□ -1.31
NDE1-201ENST00000396354 PMVKQ15126 192 aa6.89□□□□□ -1.31
NDE1-201ENST00000396354 IGKV3OR2-268A0A0C4DH90 116 aa6.89□□□□□ -1.31
NDE1-201ENST00000396354 SLURP1P55000 103 aa6.89□□□□□ -1.31
NDE1-201ENST00000396354 DEFB131AP59861 70 aa6.89□□□□□ -1.31
NDE1-201ENST00000396354 SNRPD3P62318 126 aaKnown RBP6.89□□□□□ -1.31
NDE1-201ENST00000396354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.88□□□□□ -1.31
NDE1-201ENST00000396354 IGKV2-29A2NJV5 120 aaPredicted RBP6.88□□□□□ -1.31
NDE1-201ENST00000396354 B4DSR2 109 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 ATP6V0BQ99437 205 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 IGLV4-69A0A075B6H9 119 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 A4D1N5 150 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 J3QQQ9 107 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 VCYO14598 125 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 CD28P10747 220 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 SHISA2Q6UWI4 295 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 NFE4Q86UQ8 179 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 UBE2E2Q96LR5 201 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 IGHV4OR15-8A0A075B7B6 117 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 A0A087WW49 117 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 C9JAW5 83 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 TCL1BO95988 128 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 SRSF2Q01130 221 aaKnown RBP6.88□□□□□ -1.31
NDE1-201ENST00000396354 DEFB113Q30KQ7 82 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 DLX4Q92988 240 aaPredicted RBP6.88□□□□□ -1.31
NDE1-201ENST00000396354 VCX2Q9H322 139 aa6.88□□□□□ -1.31
NDE1-201ENST00000396354 F8W1H4 67 aa6.87□□□□□ -1.31
NDE1-201ENST00000396354 A0A0J9YY99 117 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms