RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 FAM231AP0DMU4 169 aa11.96□□□□□ -0.49
PDE1C-202ENST00000396182 FAM231CP0DMU5 169 aa11.96□□□□□ -0.49
PDE1C-202ENST00000396182 GAGE5Q13069 117 aa11.96□□□□□ -0.49
PDE1C-202ENST00000396182 GAGE6Q13070 117 aa11.96□□□□□ -0.49
PDE1C-202ENST00000396182 USMG5Q96IX5 58 aa11.96□□□□□ -0.49
PDE1C-202ENST00000396182 TRBV27A0A0K0K1C4 114 aa11.96□□□□□ -0.5
PDE1C-202ENST00000396182 H7C2G1 150 aa11.96□□□□□ -0.5
PDE1C-202ENST00000396182 RHODO00212 210 aa11.96□□□□□ -0.5
PDE1C-202ENST00000396182 ELANEP08246 267 aa11.96□□□□□ -0.5
PDE1C-202ENST00000396182 TRBV7-9A0A0J9YWB2 115 aa11.95□□□□□ -0.5
PDE1C-202ENST00000396182 TMEM223A0PJW6 202 aa11.95□□□□□ -0.5
PDE1C-202ENST00000396182 H3BUX3 64 aa11.95□□□□□ -0.5
PDE1C-202ENST00000396182 LEPROTO15243 131 aa11.95□□□□□ -0.5
PDE1C-202ENST00000396182 TRAV2A0A0B4J234 112 aa11.95□□□□□ -0.5
PDE1C-202ENST00000396182 F5H697 171 aa11.95□□□□□ -0.5
PDE1C-202ENST00000396182 NTN5Q8WTR8 489 aaPredicted RBP11.95□□□□□ -0.5
PDE1C-202ENST00000396182 OPRPNQ99935 248 aaPredicted RBP11.94□□□□□ -0.5
PDE1C-202ENST00000396182 ITPR1Q14643 2758 aa11.94□□□□□ -0.5
PDE1C-202ENST00000396182 TRAV4A0A0B4J268 109 aa11.94□□□□□ -0.5
PDE1C-202ENST00000396182 MUSTN1Q8IVN3 82 aa11.94□□□□□ -0.5
PDE1C-202ENST00000396182 Q8N1Y9 231 aa11.94□□□□□ -0.5
PDE1C-202ENST00000396182 TRBV6-5A0A0K0K1A5 114 aa11.93□□□□□ -0.5
PDE1C-202ENST00000396182 KLLNB2CW77 178 aa11.93□□□□□ -0.5
PDE1C-202ENST00000396182 CRLF1O75462 422 aa11.93□□□□□ -0.5
PDE1C-202ENST00000396182 SNCGO76070 127 aa11.93□□□□□ -0.5
PDE1C-202ENST00000396182 FAM110AQ9BQ89 295 aa11.93□□□□□ -0.5
PDE1C-202ENST00000396182 A6NDX4 124 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 B5MCH6 92 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 LGALS9O00182 355 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 GAGE2BQ13066 116 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 LINC01620Q4KN68 170 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 GAGE2EQ4V326 116 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 GAGE2DQ9UEU5 116 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 ZNF256Q9Y2P7 627 aaPredicted RBP11.92□□□□□ -0.5
PDE1C-202ENST00000396182 IGHV3-64A0A075B6Q5 118 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 H3BUA1 57 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 ATP5J2P56134 94 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 NDUFV3P56181 108 aaKnown RBP11.92□□□□□ -0.5
PDE1C-202ENST00000396182 ATXN8Q156A1 80 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 FAM159AQ6UWV7 190 aa11.92□□□□□ -0.5
PDE1C-202ENST00000396182 DAZ1Q9NQZ3 744 aaKnown RBP11.92□□□□□ -0.5
PDE1C-202ENST00000396182 ZNF22P17026 224 aaPredicted RBP11.91□□□□□ -0.5
PDE1C-202ENST00000396182 Q1RN00 199 aa11.91□□□□□ -0.5
PDE1C-202ENST00000396182 NSUN5P1Q3KNT7 163 aa11.91□□□□□ -0.5
PDE1C-202ENST00000396182 TNFRSF18Q9Y5U5 241 aa11.91□□□□□ -0.5
PDE1C-202ENST00000396182 LINC01600Q96MT4 127 aa11.91□□□□□ -0.5
PDE1C-202ENST00000396182 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.9□□□□□ -0.5
PDE1C-202ENST00000396182 TRAV12-3A0A0B4J271 114 aa11.9□□□□□ -0.5
PDE1C-202ENST00000396182 IGLV1-40P01703 118 aa11.9□□□□□ -0.5
PDE1C-202ENST00000396182 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
PDE1C-202ENST00000396182 M0R2P5 195 aa11.9□□□□□ -0.5
PDE1C-202ENST00000396182 RPL13AP40429 203 aaKnown RBP11.9□□□□□ -0.5
PDE1C-202ENST00000396182 TEX49A0A1B0GTD5 131 aa11.89□□□□□ -0.51
PDE1C-202ENST00000396182 GNLYP22749 145 aa11.89□□□□□ -0.51
PDE1C-202ENST00000396182 RHOHQ15669 191 aa11.89□□□□□ -0.51
PDE1C-202ENST00000396182 DCANP1Q8TF63 244 aa11.89□□□□□ -0.51
PDE1C-202ENST00000396182 ZNF580Q9UK33 172 aa11.89□□□□□ -0.51
PDE1C-202ENST00000396182 CELSR2Q9HCU4 2923 aa11.89□□□□□ -0.51
PDE1C-202ENST00000396182 SPG11Q96JI7 2443 aa11.89□□□□□ -0.51
PDE1C-202ENST00000396182 A0A0J9YX75 114 aa11.89□□□□□ -0.51
PDE1C-202ENST00000396182 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.51
PDE1C-202ENST00000396182 ODF3Q96PU9 254 aa11.89□□□□□ -0.51
PDE1C-202ENST00000396182 TRIAP1O43715 76 aa11.88□□□□□ -0.51
PDE1C-202ENST00000396182 TRBV10-2A0A0K0K1G8 114 aa11.88□□□□□ -0.51
PDE1C-202ENST00000396182 M0QY20 66 aa11.88□□□□□ -0.51
PDE1C-202ENST00000396182 BEX4Q9NWD9 120 aaPredicted RBP11.88□□□□□ -0.51
PDE1C-202ENST00000396182 CRYBG3Q68DQ2 2970 aa11.88□□□□□ -0.51
PDE1C-202ENST00000396182 TRAV8-4A0A0B4J246 113 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 A0A0J9YXV3 536 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 A0A0J9YXY3 114 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 TRBV30A0A0K0K1B3 111 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 ZNF56Q15929 161 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 Q6Q795 121 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 C10orf105Q8TEF2 133 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 MDFICQ9P1T7 246 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 CFHR3Q02985 330 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 C9orf85Q96MD7 179 aa11.87□□□□□ -0.51
PDE1C-202ENST00000396182 IGHV4-30-2A0A087WSY4 118 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 CCDC179H3BU77 68 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 IGKV3-20P01619 116 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 IFITM1P13164 125 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 TRAV12-2A0A075B6T6 113 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 H3BMM0 161 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 GAGE7O76087 117 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 AVPP01185 164 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 GAGE12FP0CL80 117 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 GAGE12GP0CL81 117 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 GAGE12IP0CL82 117 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 ID1P41134 155 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 GAGE4Q13068 117 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 LITAFQ99732 161 aa11.86□□□□□ -0.51
PDE1C-202ENST00000396182 IGLV4-3A0A075B6K6 122 aa11.85□□□□□ -0.51
PDE1C-202ENST00000396182 IGHV3-16A0A0C4DH30 117 aa11.85□□□□□ -0.51
PDE1C-202ENST00000396182 TTC32Q5I0X7 151 aa11.85□□□□□ -0.51
PDE1C-202ENST00000396182 CSPG4Q6UVK1 2322 aa11.85□□□□□ -0.51
PDE1C-202ENST00000396182 K7EMT4 169 aa11.85□□□□□ -0.51
PDE1C-202ENST00000396182 C10orf99Q6UWK7 81 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms