RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 LITAFQ99732 161 aa16.91■□□□□ 0.3
RARA-202ENST00000394081 CCDC179H3BU77 68 aa16.91■□□□□ 0.3
RARA-202ENST00000394081 ID1P41134 155 aa16.91■□□□□ 0.3
RARA-202ENST00000394081 FAM110AQ9BQ89 295 aa16.91■□□□□ 0.3
RARA-202ENST00000394081 NCOR2Q9Y618 2525 aa16.91■□□□□ 0.3
RARA-202ENST00000394081 IGLV4-3A0A075B6K6 122 aa16.9■□□□□ 0.3
RARA-202ENST00000394081 TRBV12-3P01733 135 aa16.9■□□□□ 0.3
RARA-202ENST00000394081 PYGO1Q9Y3Y4 419 aa16.9■□□□□ 0.3
RARA-202ENST00000394081 ICOSQ9Y6W8 199 aa16.9■□□□□ 0.3
RARA-202ENST00000394081 I3L3M4 83 aa16.9■□□□□ 0.3
RARA-202ENST00000394081 RHPN1-AS1Q9BWJ2 59 aa16.9■□□□□ 0.3
RARA-202ENST00000394081 IGHV3-16A0A0C4DH30 117 aa16.89■□□□□ 0.29
RARA-202ENST00000394081 OPRPNQ99935 248 aaPredicted RBP16.89■□□□□ 0.29
RARA-202ENST00000394081 A0A0J9YXV3 536 aa16.89■□□□□ 0.29
RARA-202ENST00000394081 IGHV3-30-3P0DP02 117 aa16.89■□□□□ 0.29
RARA-202ENST00000394081 ZNF56Q15929 161 aa16.89■□□□□ 0.29
RARA-202ENST00000394081 H7C423 109 aa16.88■□□□□ 0.29
RARA-202ENST00000394081 TIMM21Q9BVV7 248 aa16.88■□□□□ 0.29
RARA-202ENST00000394081 DEFB104AQ8WTQ1 72 aa16.87■□□□□ 0.29
RARA-202ENST00000394081 MRPS36P82909 103 aaKnown RBP16.87■□□□□ 0.29
RARA-202ENST00000394081 FAM74A4Q5TZK3 123 aa16.87■□□□□ 0.29
RARA-202ENST00000394081 BSNQ9UPA5 3926 aa16.87■□□□□ 0.29
RARA-202ENST00000394081 DAZ1Q9NQZ3 744 aaKnown RBP16.86■□□□□ 0.29
RARA-202ENST00000394081 ACACAQ13085 2346 aa16.86■□□□□ 0.29
RARA-202ENST00000394081 EDA2RQ9HAV5 297 aa16.85■□□□□ 0.29
RARA-202ENST00000394081 BEX4Q9NWD9 120 aaPredicted RBP16.85■□□□□ 0.29
RARA-202ENST00000394081 IGHV3-64A0A075B6Q5 118 aa16.85■□□□□ 0.29
RARA-202ENST00000394081 TRAV12-3A0A0B4J271 114 aa16.85■□□□□ 0.29
RARA-202ENST00000394081 ANKRD11Q6UB99 2663 aaPredicted RBP16.84■□□□□ 0.29
RARA-202ENST00000394081 K7EMT4 169 aa16.84■□□□□ 0.29
RARA-202ENST00000394081 MIAQ16674 131 aa16.84■□□□□ 0.29
RARA-202ENST00000394081 TMEM219Q86XT9 240 aa16.84■□□□□ 0.29
RARA-202ENST00000394081 IGHV1-58A0A0C4DH39 117 aa16.84■□□□□ 0.29
RARA-202ENST00000394081 TRBV7-7A0A0K0K1E9 115 aa16.84■□□□□ 0.29
RARA-202ENST00000394081 LST1O00453 97 aa16.84■□□□□ 0.29
RARA-202ENST00000394081 YAE1D1Q9NRH1 226 aa16.84■□□□□ 0.29
RARA-202ENST00000394081 LINC00527Q9UJ94 153 aa16.84■□□□□ 0.29
RARA-202ENST00000394081 CCL21O00585 134 aa16.82■□□□□ 0.28
RARA-202ENST00000394081 TIMM17BO60830 172 aa16.82■□□□□ 0.28
RARA-202ENST00000394081 DCANP1Q8TF63 244 aa16.82■□□□□ 0.28
RARA-202ENST00000394081 LMO4P61968 165 aa16.81■□□□□ 0.28
RARA-202ENST00000394081 CSMD1Q96PZ7 3565 aa16.81■□□□□ 0.28
RARA-202ENST00000394081 FOXC1Q12948 553 aa16.81■□□□□ 0.28
RARA-202ENST00000394081 IGKV3-7A0A075B6H7 116 aa16.8■□□□□ 0.28
RARA-202ENST00000394081 PRSS2P07478 247 aa16.8■□□□□ 0.28
RARA-202ENST00000394081 SPXQ9BT56 116 aa16.8■□□□□ 0.28
RARA-202ENST00000394081 NDUFA12Q9UI09 145 aa16.8■□□□□ 0.28
RARA-202ENST00000394081 DCHS2Q6V1P9 2916 aa16.8■□□□□ 0.28
RARA-202ENST00000394081 IGHG2P01859 326 aa16.8■□□□□ 0.28
RARA-202ENST00000394081 ACYP1P07311 99 aa16.79■□□□□ 0.28
RARA-202ENST00000394081 TMEM61Q8N0U2 210 aa16.79■□□□□ 0.28
RARA-202ENST00000394081 IMUPQ9GZP8 106 aa16.79■□□□□ 0.28
RARA-202ENST00000394081 ZNF580Q9UK33 172 aa16.79■□□□□ 0.28
RARA-202ENST00000394081 CD28P10747 220 aa16.79■□□□□ 0.28
RARA-202ENST00000394081 IGHV1OR15-1A0A075B7D0 117 aa16.78■□□□□ 0.28
RARA-202ENST00000394081 TINCRA0A1B0GVN0 87 aa16.77■□□□□ 0.28
RARA-202ENST00000394081 ADAMTSL4-AS1Q5T5F5 129 aa16.77■□□□□ 0.28
RARA-202ENST00000394081 VSIG2Q96IQ7 327 aa16.77■□□□□ 0.28
RARA-202ENST00000394081 CACNA1BQ00975 2339 aa16.77■□□□□ 0.28
RARA-202ENST00000394081 IGHV3-11P01762 117 aa16.77■□□□□ 0.27
RARA-202ENST00000394081 TMEM126AQ9H061 195 aa16.77■□□□□ 0.27
RARA-202ENST00000394081 FAM104AQ969W3 186 aa16.76■□□□□ 0.27
RARA-202ENST00000394081 ADORA2A-AS1P86434 159 aa16.76■□□□□ 0.27
RARA-202ENST00000394081 MEIG1Q5JSS6 88 aa16.76■□□□□ 0.27
RARA-202ENST00000394081 CDSNQ15517 529 aa16.75■□□□□ 0.27
RARA-202ENST00000394081 TMEM101Q96IK0 257 aa16.75■□□□□ 0.27
RARA-202ENST00000394081 TRGV11A0A075B6L2 103 aa16.75■□□□□ 0.27
RARA-202ENST00000394081 RNF152Q8N8N0 203 aa16.75■□□□□ 0.27
RARA-202ENST00000394081 LRBAP50851 2863 aa16.74■□□□□ 0.27
RARA-202ENST00000394081 ADARB2-AS1A8MUL3 147 aa16.74■□□□□ 0.27
RARA-202ENST00000394081 IGLV1-40P01703 118 aa16.74■□□□□ 0.27
RARA-202ENST00000394081 PF4V1P10720 104 aa16.74■□□□□ 0.27
RARA-202ENST00000394081 SMIM20Q8N5G0 67 aa16.74■□□□□ 0.27
RARA-202ENST00000394081 LAMA5O15230 3695 aa16.74■□□□□ 0.27
RARA-202ENST00000394081 K7ENP7 123 aa16.73■□□□□ 0.27
RARA-202ENST00000394081 CFAP161Q6P656 301 aa16.73■□□□□ 0.27
RARA-202ENST00000394081 CHD8Q9HCK8 2581 aa16.73■□□□□ 0.27
RARA-202ENST00000394081 TRAV8-3A0A0A6YYJ7 113 aa16.73■□□□□ 0.27
RARA-202ENST00000394081 CLEC2BQ92478 149 aa16.72■□□□□ 0.27
RARA-202ENST00000394081 PRRC2AP48634 2157 aaKnown RBP16.71■□□□□ 0.27
RARA-202ENST00000394081 SNRPD3P62318 126 aaKnown RBP16.71■□□□□ 0.27
RARA-202ENST00000394081 HERV-K104P63124 156 aa16.71■□□□□ 0.27
RARA-202ENST00000394081 EPG5Q9HCE0 2579 aa16.71■□□□□ 0.27
RARA-202ENST00000394081 ATMQ13315 3056 aa16.71■□□□□ 0.27
RARA-202ENST00000394081 DUX3Q96PT4 197 aa16.71■□□□□ 0.27
RARA-202ENST00000394081 BPESC1Q9GZL8 116 aa16.71■□□□□ 0.27
RARA-202ENST00000394081 AKAP13Q12802 2813 aa16.7■□□□□ 0.26
RARA-202ENST00000394081 ACACBO00763 2458 aa16.7■□□□□ 0.26
RARA-202ENST00000394081 LY6DQ14210 128 aa16.69■□□□□ 0.26
RARA-202ENST00000394081 TRAV12-2A0A075B6T6 113 aa16.67■□□□□ 0.26
RARA-202ENST00000394081 A6NDX4 124 aa16.67■□□□□ 0.26
RARA-202ENST00000394081 NDUFA1O15239 70 aa16.67■□□□□ 0.26
RARA-202ENST00000394081 A0A1W2PPR1 153 aa16.66■□□□□ 0.26
RARA-202ENST00000394081 PIK3CD-AS1Q5SR53 167 aa16.66■□□□□ 0.26
RARA-202ENST00000394081 CFHR3Q02985 330 aa16.66■□□□□ 0.26
RARA-202ENST00000394081 K7EQG2 157 aa16.65■□□□□ 0.26
RARA-202ENST00000394081 SHISA2Q6UWI4 295 aa16.65■□□□□ 0.26
RARA-202ENST00000394081 COPS9Q8WXC6 57 aa16.65■□□□□ 0.26
RARA-202ENST00000394081 LINC01587Q99440 93 aa16.65■□□□□ 0.26
RARA-202ENST00000394081 CHCHD5Q9BSY4 110 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms