RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 A0A0D9SG52 128 aa10.84□□□□□ -0.67
PTPRK-208ENST00000392449 CXCL1P09341 107 aa10.84□□□□□ -0.67
PTPRK-208ENST00000392449 GZMBP10144 247 aa10.84□□□□□ -0.67
PTPRK-208ENST00000392449 RPL35P42766 123 aaKnown RBP10.84□□□□□ -0.67
PTPRK-208ENST00000392449 KCNIP4Q6PIL6 250 aa10.84□□□□□ -0.67
PTPRK-208ENST00000392449 ATRAIDQ6UW56 229 aa10.84□□□□□ -0.67
PTPRK-208ENST00000392449 Q8N976 141 aa10.84□□□□□ -0.67
PTPRK-208ENST00000392449 CHCHD7Q9BUK0 85 aa10.84□□□□□ -0.67
PTPRK-208ENST00000392449 SSBP4Q9BWG4 385 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-208ENST00000392449 F5H697 171 aa10.83□□□□□ -0.68
PTPRK-208ENST00000392449 NTM-AS1Q6ZSK4 140 aa10.83□□□□□ -0.68
PTPRK-208ENST00000392449 GNG13Q9P2W3 67 aa10.83□□□□□ -0.68
PTPRK-208ENST00000392449 OR5AL1P0C617 328 aa10.82□□□□□ -0.68
PTPRK-208ENST00000392449 ELOBQ15370 118 aa10.82□□□□□ -0.68
PTPRK-208ENST00000392449 CHCHD5Q9BSY4 110 aa10.82□□□□□ -0.68
PTPRK-208ENST00000392449 KIF25-AS1Q9Y6Z4 181 aa10.82□□□□□ -0.68
PTPRK-208ENST00000392449 ANGP03950 147 aaKnown RBP10.81□□□□□ -0.68
PTPRK-208ENST00000392449 CLPSL2Q6UWE3 100 aa10.81□□□□□ -0.68
PTPRK-208ENST00000392449 TPPP3Q9BW30 176 aa10.81□□□□□ -0.68
PTPRK-208ENST00000392449 C1orf43Q9BWL3 253 aa10.81□□□□□ -0.68
PTPRK-208ENST00000392449 CENPWQ5EE01 88 aa10.81□□□□□ -0.68
PTPRK-208ENST00000392449 IGLV2-8P01709 118 aa10.8□□□□□ -0.68
PTPRK-208ENST00000392449 HLA-DQA1P01909 254 aa10.8□□□□□ -0.68
PTPRK-208ENST00000392449 CRPP02741 224 aa10.8□□□□□ -0.68
PTPRK-208ENST00000392449 PLA2G1BP04054 148 aaKnown RBP10.8□□□□□ -0.68
PTPRK-208ENST00000392449 Q0VG73 95 aa10.8□□□□□ -0.68
PTPRK-208ENST00000392449 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
PTPRK-208ENST00000392449 RAB19A4D1S5 217 aa10.79□□□□□ -0.68
PTPRK-208ENST00000392449 MGPP08493 103 aa10.79□□□□□ -0.68
PTPRK-208ENST00000392449 GAGE6Q13070 117 aa10.79□□□□□ -0.68
PTPRK-208ENST00000392449 AP1S3Q96PC3 154 aa10.79□□□□□ -0.68
PTPRK-208ENST00000392449 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
PTPRK-208ENST00000392449 MANBALQ9NQG1 85 aa10.79□□□□□ -0.68
PTPRK-208ENST00000392449 SMIM17P0DL12 118 aa10.78□□□□□ -0.68
PTPRK-208ENST00000392449 CIRBP-AS1Q8TBR5 109 aa10.78□□□□□ -0.68
PTPRK-208ENST00000392449 USP17L23D6RBM5 183 aa10.77□□□□□ -0.69
PTPRK-208ENST00000392449 IGLC6P0CF74 106 aa10.77□□□□□ -0.69
PTPRK-208ENST00000392449 RBX1P62877 108 aa10.77□□□□□ -0.69
PTPRK-208ENST00000392449 EIF5AP63241 154 aaKnown RBP10.77□□□□□ -0.69
PTPRK-208ENST00000392449 OR2D3Q8NGH3 330 aa10.77□□□□□ -0.69
PTPRK-208ENST00000392449 DEFB104AQ8WTQ1 72 aa10.77□□□□□ -0.69
PTPRK-208ENST00000392449 VAX2Q9UIW0 290 aa10.77□□□□□ -0.69
PTPRK-208ENST00000392449 KRTAP10-4P60372 401 aaPredicted RBP10.76□□□□□ -0.69
PTPRK-208ENST00000392449 FER1L6-AS1Q8NA97 138 aa10.76□□□□□ -0.69
PTPRK-208ENST00000392449 TRBV20OR9-2A0A075B6H5 130 aa10.75□□□□□ -0.69
PTPRK-208ENST00000392449 TRAV1-1A0A0B4J248 108 aa10.75□□□□□ -0.69
PTPRK-208ENST00000392449 C19orf71A6NCJ1 209 aa10.75□□□□□ -0.69
PTPRK-208ENST00000392449 M0QY20 66 aa10.75□□□□□ -0.69
PTPRK-208ENST00000392449 SUMO4Q6EEV6 95 aa10.75□□□□□ -0.69
PTPRK-208ENST00000392449 LINC00269Q8N2A0 174 aa10.75□□□□□ -0.69
PTPRK-208ENST00000392449 LRP1Q07954 4544 aaKnown RBP10.75□□□□□ -0.69
PTPRK-208ENST00000392449 PRSS1P07477 247 aa10.74□□□□□ -0.69
PTPRK-208ENST00000392449 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.74□□□□□ -0.69
PTPRK-208ENST00000392449 DAZAP1Q96EP5 407 aaKnown RBP10.74□□□□□ -0.69
PTPRK-208ENST00000392449 TRBV25-1A0A075B6N4 114 aa10.74□□□□□ -0.69
PTPRK-208ENST00000392449 GNG4P50150 75 aa10.74□□□□□ -0.69
PTPRK-208ENST00000392449 NKX2-5P52952 324 aaPredicted RBP10.74□□□□□ -0.69
PTPRK-208ENST00000392449 MIAQ16674 131 aa10.74□□□□□ -0.69
PTPRK-208ENST00000392449 KRTAP26-1Q6PEX3 210 aa10.74□□□□□ -0.69
PTPRK-208ENST00000392449 PRR34Q9NV39 138 aa10.74□□□□□ -0.69
PTPRK-208ENST00000392449 IGLV10-54A0A075B6I4 117 aa10.73□□□□□ -0.69
PTPRK-208ENST00000392449 MEF2BQ02080 365 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-208ENST00000392449 C14orf177Q52M58 125 aa10.73□□□□□ -0.69
PTPRK-208ENST00000392449 SULT1A2P50226 295 aa10.72□□□□□ -0.69
PTPRK-208ENST00000392449 IQCJQ1A5X6 159 aa10.72□□□□□ -0.69
PTPRK-208ENST00000392449 TMEM97Q5BJF2 176 aa10.72□□□□□ -0.69
PTPRK-208ENST00000392449 LYZL1Q6UWQ5 148 aa10.72□□□□□ -0.69
PTPRK-208ENST00000392449 IGHV1-24A0A0C4DH33 117 aa10.71□□□□□ -0.69
PTPRK-208ENST00000392449 KRTAP29-1A8MX34 341 aaPredicted RBP10.71□□□□□ -0.69
PTPRK-208ENST00000392449 P01737 135 aa10.71□□□□□ -0.69
PTPRK-208ENST00000392449 RAB5CP51148 216 aa10.71□□□□□ -0.69
PTPRK-208ENST00000392449 RPS20P60866 119 aaKnown RBP10.71□□□□□ -0.69
PTPRK-208ENST00000392449 PKIAP61925 76 aa10.71□□□□□ -0.69
PTPRK-208ENST00000392449 GFRA4Q9GZZ7 299 aa10.71□□□□□ -0.69
PTPRK-208ENST00000392449 MED9Q9NWA0 146 aa10.71□□□□□ -0.69
PTPRK-208ENST00000392449 CACNG7P62955 275 aa10.7□□□□□ -0.7
PTPRK-208ENST00000392449 C20orf203Q8NBC4 194 aa10.7□□□□□ -0.7
PTPRK-208ENST00000392449 IGLV4-60A0A075B6I1 120 aa10.69□□□□□ -0.7
PTPRK-208ENST00000392449 PANO1I0J062 215 aa10.69□□□□□ -0.7
PTPRK-208ENST00000392449 PDE6DO43924 150 aa10.69□□□□□ -0.7
PTPRK-208ENST00000392449 IFNA1P01562 189 aa10.69□□□□□ -0.7
PTPRK-208ENST00000392449 BCL2P10415 239 aa10.69□□□□□ -0.7
PTPRK-208ENST00000392449 REG3AQ06141 175 aa10.69□□□□□ -0.7
PTPRK-208ENST00000392449 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.69□□□□□ -0.7
PTPRK-208ENST00000392449 PKHD1L1Q86WI1 4243 aa10.69□□□□□ -0.7
PTPRK-208ENST00000392449 TEX46H3BTG2 121 aa10.68□□□□□ -0.7
PTPRK-208ENST00000392449 H7C1H1 209 aa10.68□□□□□ -0.7
PTPRK-208ENST00000392449 NTF3P20783 257 aa10.68□□□□□ -0.7
PTPRK-208ENST00000392449 EIF5AL1Q6IS14 154 aaKnown RBP10.68□□□□□ -0.7
PTPRK-208ENST00000392449 RASL11AQ6T310 242 aa10.68□□□□□ -0.7
PTPRK-208ENST00000392449 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
PTPRK-208ENST00000392449 NUDT10Q8NFP7 164 aa10.68□□□□□ -0.7
PTPRK-208ENST00000392449 SMIM12Q96EX1 92 aa10.68□□□□□ -0.7
PTPRK-208ENST00000392449 NUDT11Q96G61 164 aa10.68□□□□□ -0.7
PTPRK-208ENST00000392449 TMEM243Q9BU79 118 aa10.68□□□□□ -0.7
PTPRK-208ENST00000392449 RNASE7Q9H1E1 156 aaKnown RBP10.68□□□□□ -0.7
PTPRK-208ENST00000392449 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
PTPRK-208ENST00000392449 XKRY2A2RUG3 117 aa10.67□□□□□ -0.7
PTPRK-208ENST00000392449 F2Z2F3 143 aa10.67□□□□□ -0.7
PTPRK-208ENST00000392449 K7EN84 100 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms