RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 AMN1Q8IY45 258 aa17.54■□□□□ 0.4
HOMER3-202ENST00000392351 RPL36ALQ969Q0 106 aaKnown RBP17.54■□□□□ 0.4
HOMER3-202ENST00000392351 BTF3L4Q96K17 158 aa17.54■□□□□ 0.4
HOMER3-202ENST00000392351 LINC00588Q9Y4M8 146 aa17.53■□□□□ 0.4
HOMER3-202ENST00000392351 URGCP-MRPS24S4R325 110 aa17.53■□□□□ 0.4
HOMER3-202ENST00000392351 TRBV7-3A0A075B6L6 115 aa17.53■□□□□ 0.4
HOMER3-202ENST00000392351 S100PP25815 95 aa17.53■□□□□ 0.4
HOMER3-202ENST00000392351 ATP6V0E2Q8NHE4 81 aa17.53■□□□□ 0.4
HOMER3-202ENST00000392351 RASL11AQ6T310 242 aa17.52■□□□□ 0.39
HOMER3-202ENST00000392351 LYPD5Q6UWN5 251 aa17.52■□□□□ 0.39
HOMER3-202ENST00000392351 GATD1Q8NB37 220 aa17.52■□□□□ 0.39
HOMER3-202ENST00000392351 RNF185Q96GF1 192 aa17.52■□□□□ 0.39
HOMER3-202ENST00000392351 DNAH1Q9P2D7 4330 aa17.52■□□□□ 0.39
HOMER3-202ENST00000392351 VPS13DQ5THJ4 4388 aa17.51■□□□□ 0.39
HOMER3-202ENST00000392351 RAB4AP20338 218 aa17.5■□□□□ 0.39
HOMER3-202ENST00000392351 FAM104BQ5XKR9 115 aa17.49■□□□□ 0.39
HOMER3-202ENST00000392351 TNFRSF18Q9Y5U5 241 aa17.49■□□□□ 0.39
HOMER3-202ENST00000392351 TRAV9-1A0A075B6T8 112 aa17.49■□□□□ 0.39
HOMER3-202ENST00000392351 UBE2D3P61077 147 aa17.49■□□□□ 0.39
HOMER3-202ENST00000392351 UBE2D2P62837 147 aa17.49■□□□□ 0.39
HOMER3-202ENST00000392351 NIT2Q9NQR4 276 aa17.49■□□□□ 0.39
HOMER3-202ENST00000392351 ATRAIDQ6UW56 229 aa17.48■□□□□ 0.39
HOMER3-202ENST00000392351 FRZBQ92765 325 aa17.48■□□□□ 0.39
HOMER3-202ENST00000392351 DNAJC30Q96LL9 226 aa17.48■□□□□ 0.39
HOMER3-202ENST00000392351 GTSF1LQ9H1H1 148 aa17.48■□□□□ 0.39
HOMER3-202ENST00000392351 MRPS16Q9Y3D3 137 aaKnown RBP17.48■□□□□ 0.39
HOMER3-202ENST00000392351 MRAP2Q96G30 205 aa17.47■□□□□ 0.39
HOMER3-202ENST00000392351 RPL39LQ96EH5 51 aaKnown RBP17.46■□□□□ 0.39
HOMER3-202ENST00000392351 SACSQ9NZJ4 4579 aa17.46■□□□□ 0.39
HOMER3-202ENST00000392351 GAS8-AS1O95177 125 aa17.45■□□□□ 0.38
HOMER3-202ENST00000392351 TIRAPP58753 221 aa17.45■□□□□ 0.38
HOMER3-202ENST00000392351 MRPL51Q4U2R6 128 aaKnown RBP17.45■□□□□ 0.38
HOMER3-202ENST00000392351 IGHV3-38A0A0C4DH36 116 aa17.44■□□□□ 0.38
HOMER3-202ENST00000392351 SMKR1H3BMG3 65 aa17.44■□□□□ 0.38
HOMER3-202ENST00000392351 NCR2O95944 276 aa17.44■□□□□ 0.38
HOMER3-202ENST00000392351 UPK3BQ9BT76 320 aa17.44■□□□□ 0.38
HOMER3-202ENST00000392351 OR10J3Q5JRS4 329 aa17.43■□□□□ 0.38
HOMER3-202ENST00000392351 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.43■□□□□ 0.38
HOMER3-202ENST00000392351 DAZ4Q86SG3 579 aaKnown RBP17.42■□□□□ 0.38
HOMER3-202ENST00000392351 DAZ3Q9NR90 486 aaKnown RBP17.42■□□□□ 0.38
HOMER3-202ENST00000392351 RPS10P46783 165 aaKnown RBP17.41■□□□□ 0.38
HOMER3-202ENST00000392351 LELP1Q5T871 98 aa17.4■□□□□ 0.38
HOMER3-202ENST00000392351 HYDINQ4G0P3 5121 aa17.4■□□□□ 0.38
HOMER3-202ENST00000392351 CKS2P33552 79 aa17.4■□□□□ 0.38
HOMER3-202ENST00000392351 Q9H8V8 135 aa17.4■□□□□ 0.38
HOMER3-202ENST00000392351 KMT2AQ03164 3969 aa17.39■□□□□ 0.37
HOMER3-202ENST00000392351 ELOBQ15370 118 aa17.39■□□□□ 0.37
HOMER3-202ENST00000392351 TMEM136Q6ZRR5 245 aa17.39■□□□□ 0.37
HOMER3-202ENST00000392351 IGLV2-18A0A075B6J9 118 aa17.38■□□□□ 0.37
HOMER3-202ENST00000392351 TGIF2-C20orf24A0A0A6YYL0 155 aa17.38■□□□□ 0.37
HOMER3-202ENST00000392351 D6R8Y8 96 aa17.38■□□□□ 0.37
HOMER3-202ENST00000392351 WFDC10BQ8IUB3 73 aa17.38■□□□□ 0.37
HOMER3-202ENST00000392351 TRAV8-6A0A0B4J262 113 aa17.37■□□□□ 0.37
HOMER3-202ENST00000392351 TRBV6-5A0A0K0K1A5 114 aa17.37■□□□□ 0.37
HOMER3-202ENST00000392351 SDHAF1A6NFY7 115 aa17.37■□□□□ 0.37
HOMER3-202ENST00000392351 NRACQ8N912 160 aa17.37■□□□□ 0.37
HOMER3-202ENST00000392351 RYR3Q15413 4870 aa17.37■□□□□ 0.37
HOMER3-202ENST00000392351 SIVA1O15304 175 aa17.36■□□□□ 0.37
HOMER3-202ENST00000392351 PPP1R17O96001 155 aa17.36■□□□□ 0.37
HOMER3-202ENST00000392351 ST20Q9HBF5 79 aa17.36■□□□□ 0.37
HOMER3-202ENST00000392351 CBLN2Q8IUK8 224 aa17.36■□□□□ 0.37
HOMER3-202ENST00000392351 TRBV6-8A0A0A6YYG3 113 aa17.35■□□□□ 0.37
HOMER3-202ENST00000392351 PPBPP02775 128 aa17.35■□□□□ 0.37
HOMER3-202ENST00000392351 ORMDL3Q8N138 153 aa17.35■□□□□ 0.37
HOMER3-202ENST00000392351 DEFB104AQ8WTQ1 72 aa17.35■□□□□ 0.37
HOMER3-202ENST00000392351 RYR2Q92736 4967 aa17.35■□□□□ 0.37
HOMER3-202ENST00000392351 HLA-DQA1P01909 254 aa17.34■□□□□ 0.37
HOMER3-202ENST00000392351 TMEM97Q5BJF2 176 aa17.34■□□□□ 0.37
HOMER3-202ENST00000392351 GNB1LQ9BYB4 327 aa17.34■□□□□ 0.37
HOMER3-202ENST00000392351 SMCO4Q9NRQ5 59 aa17.34■□□□□ 0.37
HOMER3-202ENST00000392351 TRBV24-1A0A075B6N3 115 aa17.33■□□□□ 0.37
HOMER3-202ENST00000392351 COX19Q49B96 90 aa17.33■□□□□ 0.37
HOMER3-202ENST00000392351 NTM-AS1Q6ZSK4 140 aa17.33■□□□□ 0.37
HOMER3-202ENST00000392351 TMEM70Q9BUB7 260 aa17.33■□□□□ 0.37
HOMER3-202ENST00000392351 SUMO2P61956 95 aaKnown RBP17.32■□□□□ 0.36
HOMER3-202ENST00000392351 DNAH6Q9C0G6 4158 aa17.32■□□□□ 0.36
HOMER3-202ENST00000392351 M0R2N4 97 aa17.32■□□□□ 0.36
HOMER3-202ENST00000392351 TNFRSF6BO95407 300 aa17.32■□□□□ 0.36
HOMER3-202ENST00000392351 COTL1Q14019 142 aa17.32■□□□□ 0.36
HOMER3-202ENST00000392351 PRELID3AQ96N28 172 aa17.32■□□□□ 0.36
HOMER3-202ENST00000392351 YPEL4Q96NS1 127 aa17.32■□□□□ 0.36
HOMER3-202ENST00000392351 NPYP01303 97 aa17.31■□□□□ 0.36
HOMER3-202ENST00000392351 APCSP02743 223 aa17.3■□□□□ 0.36
HOMER3-202ENST00000392351 POLR2KP53803 58 aaKnown RBP17.3■□□□□ 0.36
HOMER3-202ENST00000392351 TRBV25-1A0A075B6N4 114 aa17.29■□□□□ 0.36
HOMER3-202ENST00000392351 NBDYA0A0U1RRE5 68 aa17.29■□□□□ 0.36
HOMER3-202ENST00000392351 I3L3M4 83 aa17.29■□□□□ 0.36
HOMER3-202ENST00000392351 MT-ND6P03923 174 aa17.29■□□□□ 0.36
HOMER3-202ENST00000392351 DNAH10OSP0CZ25 163 aa17.29■□□□□ 0.36
HOMER3-202ENST00000392351 PMCHP20382 165 aa17.29■□□□□ 0.36
HOMER3-202ENST00000392351 C20orf78Q9BR46 151 aa17.29■□□□□ 0.36
HOMER3-202ENST00000392351 IGHV1-24A0A0C4DH33 117 aa17.28■□□□□ 0.36
HOMER3-202ENST00000392351 TRBV27A0A0K0K1C4 114 aa17.28■□□□□ 0.36
HOMER3-202ENST00000392351 PHOX2AO14813 284 aa17.28■□□□□ 0.36
HOMER3-202ENST00000392351 IQCJQ1A5X6 159 aa17.28■□□□□ 0.36
HOMER3-202ENST00000392351 KIAA1644Q3SXP7 199 aa17.28■□□□□ 0.36
HOMER3-202ENST00000392351 CHCHD5Q9BSY4 110 aa17.28■□□□□ 0.36
HOMER3-202ENST00000392351 LINC01556Q5JQF7 62 aa17.27■□□□□ 0.35
HOMER3-202ENST00000392351 MRPL18Q9H0U6 180 aaKnown RBP17.27■□□□□ 0.35
HOMER3-202ENST00000392351 VCYO14598 125 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms