RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 ECSCRQ19T08 205 aa5.65□□□□□ -1.5
TRBV28-201ENST00000390400 ODF3L2Q3SX64 289 aa5.65□□□□□ -1.5
TRBV28-201ENST00000390400 ORMDL2Q53FV1 153 aa5.65□□□□□ -1.5
TRBV28-201ENST00000390400 SIGLEC15Q6ZMC9 328 aa5.65□□□□□ -1.5
TRBV28-201ENST00000390400 Q6ZSV7 163 aa5.65□□□□□ -1.5
TRBV28-201ENST00000390400 ZC2HC1AQ96GY0 325 aa5.65□□□□□ -1.5
TRBV28-201ENST00000390400 SPXQ9BT56 116 aa5.65□□□□□ -1.5
TRBV28-201ENST00000390400 IGHV4-4A0A075B6R2 117 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 TRAV41A0A0B4J266 112 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 FABP5P3A8MUU1 101 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 SNAI2O43623 268 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 IGF1P05019 195 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 P0DMU3 169 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 FAM231AP0DMU4 169 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 FAM231CP0DMU5 169 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 IFITM1P13164 125 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 HLA-DMBP28068 263 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 ZNF138P52744 262 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 CRIP2P52943 208 aaPredicted RBP5.64□□□□□ -1.51
TRBV28-201ENST00000390400 XGP55808 180 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 NDUFV3P56181 108 aaKnown RBP5.64□□□□□ -1.51
TRBV28-201ENST00000390400 HERVK_113P61574 105 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 RPL32P62910 135 aaKnown RBP5.64□□□□□ -1.51
TRBV28-201ENST00000390400 MORN3Q6PF18 240 aaPredicted RBP5.64□□□□□ -1.51
TRBV28-201ENST00000390400 GOLT1AQ6ZVE7 132 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 SH2D6Q7Z4S9 175 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 PRNTQ86SH4 94 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 C20orf78Q9BR46 151 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 C16orf95Q9H693 158 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 ZNF580Q9UK33 172 aa5.64□□□□□ -1.51
TRBV28-201ENST00000390400 IGLV2-18A0A075B6J9 118 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 CGB1A6NKQ9 187 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 E7EUB6 86 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 G3V318 75 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 ACYP1P07311 99 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 APELAP0DMC3 54 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 ORM2P19652 201 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 LEPP41159 167 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 WT1-ASQ06250 92 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 LAGE3Q14657 143 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 TTC32Q5I0X7 151 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 LYZL1Q6UWQ5 148 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 PRIMA1Q86XR5 153 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.63□□□□□ -1.51
TRBV28-201ENST00000390400 NEXN-AS1Q8NBZ9 246 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 MRPL53Q96EL3 112 aaKnown RBP5.63□□□□□ -1.51
TRBV28-201ENST00000390400 MDFICQ9P1T7 246 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 LINC00527Q9UJ94 153 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 F11RQ9Y624 299 aaKnown RBP5.63□□□□□ -1.51
TRBV28-201ENST00000390400 COL6A5A8TX70 2615 aa5.63□□□□□ -1.51
TRBV28-201ENST00000390400 IGKV2D-26A0A0A0MRZ7 120 aa5.62□□□□□ -1.51
TRBV28-201ENST00000390400 CLPSL1A2RUU4 121 aa5.62□□□□□ -1.51
TRBV28-201ENST00000390400 M0R381 172 aa5.62□□□□□ -1.51
TRBV28-201ENST00000390400 MT-ATP8P03928 68 aa5.62□□□□□ -1.51
TRBV28-201ENST00000390400 RPL7P18124 248 aaKnown RBP5.62□□□□□ -1.51
TRBV28-201ENST00000390400 C10orf126Q8N4M7 172 aa5.62□□□□□ -1.51
TRBV28-201ENST00000390400 LINC01006Q8NI28 216 aa5.62□□□□□ -1.51
TRBV28-201ENST00000390400 ASCL2Q99929 193 aa5.62□□□□□ -1.51
TRBV28-201ENST00000390400 NAA38Q9BRA0 125 aaKnown RBP5.62□□□□□ -1.51
TRBV28-201ENST00000390400 LENEPQ9Y5L5 61 aa5.62□□□□□ -1.51
TRBV28-201ENST00000390400 CUBNO60494 3623 aa5.61□□□□□ -1.51
TRBV28-201ENST00000390400 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.61□□□□□ -1.51
TRBV28-201ENST00000390400 A0A0B4J2C4 111 aa5.61□□□□□ -1.51
TRBV28-201ENST00000390400 A0A1B0GX51 115 aa5.61□□□□□ -1.51
TRBV28-201ENST00000390400 H3BT86 120 aa5.61□□□□□ -1.51
TRBV28-201ENST00000390400 H3BUA1 57 aa5.61□□□□□ -1.51
TRBV28-201ENST00000390400 MRPS12O15235 138 aaKnown RBP5.61□□□□□ -1.51
TRBV28-201ENST00000390400 SH2D1AO60880 128 aa5.61□□□□□ -1.51
TRBV28-201ENST00000390400 LGALS1P09382 135 aaKnown RBP5.61□□□□□ -1.51
TRBV28-201ENST00000390400 CD7P09564 240 aa5.61□□□□□ -1.51
TRBV28-201ENST00000390400 RNF185Q96GF1 192 aa5.61□□□□□ -1.51
TRBV28-201ENST00000390400 C18orf15Q96N68 181 aa5.61□□□□□ -1.51
TRBV28-201ENST00000390400 SLC50A1Q9BRV3 221 aa5.61□□□□□ -1.51
TRBV28-201ENST00000390400 WNK1Q9H4A3 2382 aa5.6□□□□□ -1.51
TRBV28-201ENST00000390400 STAB1Q9NY15 2570 aa5.6□□□□□ -1.51
TRBV28-201ENST00000390400 TRBV7-7A0A0K0K1E9 115 aa5.6□□□□□ -1.51
TRBV28-201ENST00000390400 TMEM89A2RUT3 159 aa5.6□□□□□ -1.51
TRBV28-201ENST00000390400 K7ERJ3 54 aa5.6□□□□□ -1.51
TRBV28-201ENST00000390400 CRIP1P50238 77 aa5.6□□□□□ -1.51
TRBV28-201ENST00000390400 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
TRBV28-201ENST00000390400 KRTAP24-1Q3LI83 254 aa5.6□□□□□ -1.51
TRBV28-201ENST00000390400 NFE4Q86UQ8 179 aa5.6□□□□□ -1.51
TRBV28-201ENST00000390400 TOMM6Q96B49 74 aa5.6□□□□□ -1.51
TRBV28-201ENST00000390400 MCRIP2Q9BUT9 160 aaKnown RBP5.6□□□□□ -1.51
TRBV28-201ENST00000390400 UFC1Q9Y3C8 167 aa5.6□□□□□ -1.51
TRBV28-201ENST00000390400 A0A0J9YX75 114 aa5.59□□□□□ -1.51
TRBV28-201ENST00000390400 LOC389332A0A1B0GUA5 103 aa5.59□□□□□ -1.51
TRBV28-201ENST00000390400 BRI3O95415 125 aa5.59□□□□□ -1.51
TRBV28-201ENST00000390400 TRGV3P03979 118 aa5.59□□□□□ -1.51
TRBV28-201ENST00000390400 DEFB121Q5J5C9 76 aa5.59□□□□□ -1.51
TRBV28-201ENST00000390400 TMEM78Q5T7P6 136 aa5.59□□□□□ -1.51
TRBV28-201ENST00000390400 C10orf99Q6UWK7 81 aa5.59□□□□□ -1.51
TRBV28-201ENST00000390400 GTSCR1Q86UQ5 136 aa5.59□□□□□ -1.51
TRBV28-201ENST00000390400 NDUFA11Q86Y39 141 aa5.59□□□□□ -1.51
TRBV28-201ENST00000390400 DNAJC30Q96LL9 226 aa5.59□□□□□ -1.51
TRBV28-201ENST00000390400 MRPL35Q9NZE8 188 aaKnown RBP5.59□□□□□ -1.51
TRBV28-201ENST00000390400 IGLV11-55A0A075B6I3 123 aa5.58□□□□□ -1.52
TRBV28-201ENST00000390400 FAM223BA6NKX1 122 aa5.58□□□□□ -1.52
TRBV28-201ENST00000390400 I3L2K1 104 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms