RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ARTNQ5T4W7 220 aa9.67□□□□□ -0.86
SRGAP3-202ENST00000383836 LOXP28300 417 aaPredicted RBP9.67□□□□□ -0.86
SRGAP3-202ENST00000383836 ATP5EP2Q5VTU8 51 aa9.67□□□□□ -0.86
SRGAP3-202ENST00000383836 C5orf38Q86SI9 138 aa9.66□□□□□ -0.86
SRGAP3-202ENST00000383836 C20orf197Q8N268 126 aa9.66□□□□□ -0.86
SRGAP3-202ENST00000383836 ETDCA0A1B0GVM5 59 aa9.66□□□□□ -0.86
SRGAP3-202ENST00000383836 DIAPH2-AS1Q14236 149 aa9.66□□□□□ -0.86
SRGAP3-202ENST00000383836 MIAQ16674 131 aa9.66□□□□□ -0.86
SRGAP3-202ENST00000383836 TM2D2Q9BX73 214 aa9.66□□□□□ -0.86
SRGAP3-202ENST00000383836 BUB3O43684 328 aa9.66□□□□□ -0.86
SRGAP3-202ENST00000383836 NOP10Q9NPE3 64 aaKnown RBP9.66□□□□□ -0.86
SRGAP3-202ENST00000383836 IGHV1-58A0A0C4DH39 117 aa9.65□□□□□ -0.86
SRGAP3-202ENST00000383836 C16orf54Q6UWD8 224 aa9.65□□□□□ -0.86
SRGAP3-202ENST00000383836 H3BUA1 57 aa9.65□□□□□ -0.87
SRGAP3-202ENST00000383836 K7EQD1 137 aa9.65□□□□□ -0.87
SRGAP3-202ENST00000383836 IGLV3-9A0A075B6K5 115 aa9.64□□□□□ -0.87
SRGAP3-202ENST00000383836 IMUPQ9GZP8 106 aa9.64□□□□□ -0.87
SRGAP3-202ENST00000383836 ZFHX2Q9C0A1 2572 aaPredicted RBP9.64□□□□□ -0.87
SRGAP3-202ENST00000383836 NDUFC1O43677 76 aa9.64□□□□□ -0.87
SRGAP3-202ENST00000383836 COX7A2LO14548 114 aa9.64□□□□□ -0.87
SRGAP3-202ENST00000383836 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
SRGAP3-202ENST00000383836 ZNF503-AS2A6NEH8 195 aa9.64□□□□□ -0.87
SRGAP3-202ENST00000383836 FRMD6-AS1P0C7T7 363 aa9.64□□□□□ -0.87
SRGAP3-202ENST00000383836 CRIPAKQ8N1N5 446 aa9.64□□□□□ -0.87
SRGAP3-202ENST00000383836 A0A096LPF7 62 aa9.64□□□□□ -0.87
SRGAP3-202ENST00000383836 TMEM105Q8N8V8 129 aa9.63□□□□□ -0.87
SRGAP3-202ENST00000383836 ZNF503Q96F45 646 aa9.63□□□□□ -0.87
SRGAP3-202ENST00000383836 TEX22C9J3V5 150 aa9.63□□□□□ -0.87
SRGAP3-202ENST00000383836 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
SRGAP3-202ENST00000383836 MTORP42345 2549 aa9.63□□□□□ -0.87
SRGAP3-202ENST00000383836 SEC61GP60059 68 aa9.63□□□□□ -0.87
SRGAP3-202ENST00000383836 ZNF524Q96C55 264 aa9.63□□□□□ -0.87
SRGAP3-202ENST00000383836 Q9HAA7 133 aa9.63□□□□□ -0.87
SRGAP3-202ENST00000383836 A0A1B0GXF2 115 aa9.63□□□□□ -0.87
SRGAP3-202ENST00000383836 RPL18AQ02543 176 aaKnown RBP9.62□□□□□ -0.87
SRGAP3-202ENST00000383836 FANCD2OSQ96PS1 177 aa9.62□□□□□ -0.87
SRGAP3-202ENST00000383836 SPRY2O43597 315 aa9.62□□□□□ -0.87
SRGAP3-202ENST00000383836 I3L2K1 104 aa9.62□□□□□ -0.87
SRGAP3-202ENST00000383836 FAM110AQ9BQ89 295 aa9.62□□□□□ -0.87
SRGAP3-202ENST00000383836 MSMBP08118 114 aa9.62□□□□□ -0.87
SRGAP3-202ENST00000383836 IGKV2D-26A0A0A0MRZ7 120 aa9.62□□□□□ -0.87
SRGAP3-202ENST00000383836 TRBV7-3A0A075B6L6 115 aa9.62□□□□□ -0.87
SRGAP3-202ENST00000383836 MED14OSP0DP75 135 aa9.62□□□□□ -0.87
SRGAP3-202ENST00000383836 C19orf71A6NCJ1 209 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 IGHV3-30-3P0DP02 117 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 C9orf47Q6ZRZ4 202 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 PATE2Q6UY27 113 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 IGLV1-44P01699 117 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 PRR30Q53SZ7 412 aaPredicted RBP9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 Q6ZQT7 251 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 NCR3O14931 201 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 C1orf195Q5TG92 126 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 KAAG1Q9UBP8 84 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 P0DMU3 169 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 FAM231AP0DMU4 169 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 FAM231CP0DMU5 169 aa9.61□□□□□ -0.87
SRGAP3-202ENST00000383836 HIST2H2BDQ6DRA6 164 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 CCDC179H3BU77 68 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 NFE4Q86UQ8 179 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 GNLYP22749 145 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 LRRC75A-AS1Q8N1F1 130 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 C20orf173Q96LM9 149 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 MRPL36Q9P0J6 103 aaKnown RBP9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 J3QKU1 62 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 SERP2Q8N6R1 65 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 DIRC1Q969H9 104 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 K7EIM0 57 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 CEP295Q9C0D2 2601 aa9.6□□□□□ -0.87
SRGAP3-202ENST00000383836 FGF23Q9GZV9 251 aaPredicted RBP9.59□□□□□ -0.87
SRGAP3-202ENST00000383836 MDFICQ9P1T7 246 aa9.59□□□□□ -0.87
SRGAP3-202ENST00000383836 IGKV2D-24A0A075B6R9 120 aa9.59□□□□□ -0.87
SRGAP3-202ENST00000383836 PROK2Q9HC23 129 aa9.59□□□□□ -0.87
SRGAP3-202ENST00000383836 C10orf105Q8TEF2 133 aa9.59□□□□□ -0.87
SRGAP3-202ENST00000383836 YPEL4Q96NS1 127 aa9.59□□□□□ -0.87
SRGAP3-202ENST00000383836 CAMK2N2Q96S95 79 aa9.59□□□□□ -0.87
SRGAP3-202ENST00000383836 IGKV1-17P01599 117 aa9.59□□□□□ -0.87
SRGAP3-202ENST00000383836 Q96MF0 132 aa9.59□□□□□ -0.87
SRGAP3-202ENST00000383836 ENHOQ6UWT2 76 aa9.58□□□□□ -0.88
SRGAP3-202ENST00000383836 BPY2O14599 106 aa9.58□□□□□ -0.88
SRGAP3-202ENST00000383836 HOXB4P17483 251 aaPredicted RBP9.58□□□□□ -0.88
SRGAP3-202ENST00000383836 WFDC11Q8NEX6 87 aa9.58□□□□□ -0.88
SRGAP3-202ENST00000383836 NPBQ8NG41 125 aa9.58□□□□□ -0.88
SRGAP3-202ENST00000383836 C11orf1Q9H5F2 150 aa9.58□□□□□ -0.88
SRGAP3-202ENST00000383836 LYPD6Q86Y78 171 aa9.58□□□□□ -0.88
SRGAP3-202ENST00000383836 C16orf74Q96GX8 76 aa9.58□□□□□ -0.88
SRGAP3-202ENST00000383836 A0A0J9YXY3 114 aa9.57□□□□□ -0.88
SRGAP3-202ENST00000383836 KLK5Q9Y337 293 aaPredicted RBP9.57□□□□□ -0.88
SRGAP3-202ENST00000383836 PIK3CD-AS1Q5SR53 167 aa9.57□□□□□ -0.88
SRGAP3-202ENST00000383836 IGLV11-55A0A075B6I3 123 aa9.57□□□□□ -0.88
SRGAP3-202ENST00000383836 IGLV10-54A0A075B6I4 117 aa9.56□□□□□ -0.88
SRGAP3-202ENST00000383836 IGLV2-14P01704 120 aa9.56□□□□□ -0.88
SRGAP3-202ENST00000383836 COX7CP15954 63 aa9.56□□□□□ -0.88
SRGAP3-202ENST00000383836 KRTAP27-1Q3LI81 207 aa9.56□□□□□ -0.88
SRGAP3-202ENST00000383836 SEM1Q6ZVN7 128 aa9.56□□□□□ -0.88
SRGAP3-202ENST00000383836 C11orf53Q8IXP5 236 aa9.56□□□□□ -0.88
SRGAP3-202ENST00000383836 TP73-AS1Q9UF72 201 aa9.56□□□□□ -0.88
SRGAP3-202ENST00000383836 IGKV1OR2-108A0A075B7D4 117 aa9.56□□□□□ -0.88
SRGAP3-202ENST00000383836 GYPEP15421 78 aa9.56□□□□□ -0.88
SRGAP3-202ENST00000383836 TRBV30A0A0K0K1B3 111 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms