RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 C10orf142B7Z368 130 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 CFC1BP0CG36 223 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 CFC1P0CG37 223 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 RPL36ALQ969Q0 106 aaKnown RBP4.41□□□□□ -1.7
RFC1-202ENST00000381897 ZNF407Q9C0G0 2248 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 CFAP47Q6ZTR5 3102 aa4.4□□□□□ -1.7
RFC1-202ENST00000381897 UQCRQO14949 82 aa4.4□□□□□ -1.7
RFC1-202ENST00000381897 IGLV1-44P01699 117 aa4.4□□□□□ -1.7
RFC1-202ENST00000381897 PSMB8P28062 276 aa4.4□□□□□ -1.7
RFC1-202ENST00000381897 FAM74A4Q5TZK3 123 aa4.4□□□□□ -1.7
RFC1-202ENST00000381897 LINC00574Q9H8X3 128 aa4.4□□□□□ -1.7
RFC1-202ENST00000381897 EGR2P11161 476 aaPredicted RBP4.4□□□□□ -1.7
RFC1-202ENST00000381897 EML6Q6ZMW3 1958 aa4.4□□□□□ -1.7
RFC1-202ENST00000381897 LINC00694P0DN24 101 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 IGHV1-8P0DP01 117 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 SS18Q15532 418 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 IGFL3Q6UXB1 125 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 MDS2Q8NDY4 140 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 Q8TAT8 98 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 OVOL2Q9BRP0 275 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 INTS1Q8N201 2190 aaKnown RBP4.4□□□□□ -1.71
RFC1-202ENST00000381897 IGKV2D-26A0A0A0MRZ7 120 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 IGHV1-3A0A0C4DH29 117 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 C17orf100A8MU93 164 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 AVPP01185 164 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 LHBP01229 141 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 NDUFA11Q86Y39 141 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 MUSTN1Q8IVN3 82 aa4.4□□□□□ -1.71
RFC1-202ENST00000381897 IGLC6P0CF74 106 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 C14orf178Q8N769 122 aaPredicted RBP4.39□□□□□ -1.71
RFC1-202ENST00000381897 C9orf106Q8NAJ2 232 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 EXPH5Q8NEV8 1989 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 ROS1P08922 2347 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 TRBV7-3A0A075B6L6 115 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 CGB3P0DN86 165 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 CGB7P0DN87 165 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 PRR30Q53SZ7 412 aaPredicted RBP4.39□□□□□ -1.71
RFC1-202ENST00000381897 NOTCH2Q04721 2471 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 IGHV7-81A0A0B4J1V7 117 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 LEPROTO15243 131 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 OVOL3O00110 214 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 EFNA4P52798 201 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 ESPL1Q14674 2120 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 ZNF491Q8N8L2 437 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 ABCA4P78363 2273 aa4.39□□□□□ -1.71
RFC1-202ENST00000381897 WI2-2373I1.2A0A1W2PRP0 233 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 IGLV2-11P01706 119 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 HIGD2BQ4VC39 106 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 DEFB121Q5J5C9 76 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 IGHV3-73A0A0B4J1V6 119 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 P0DMU3 169 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 FAM231AP0DMU4 169 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 FAM231CP0DMU5 169 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 DHRS4-AS1Q9P1J3 65 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 CACNA1DQ01668 2161 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 PRR14LQ5THK1 2151 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 LY6G6EA0A0G2JKS1 128 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 I3L2K1 104 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 IGLV2-23P01705 113 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 C9orf139Q6ZV77 190 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 LCA10Q71F78 164 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 MAPKAPK5-AS1Q8N8E1 139 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 U3KQA8 63 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 INSL3P51460 131 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 ATP5EP56381 51 aaPredicted RBP4.38□□□□□ -1.71
RFC1-202ENST00000381897 HHLA3Q9XRX5 114 aa4.38□□□□□ -1.71
RFC1-202ENST00000381897 IGLV3-9A0A075B6K5 115 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 BUB1B-PAK6H3BSN5 160 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 RASL10AQ92737 203 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 DOCK10Q96BY6 2186 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 TNRC18O15417 2968 aaPredicted RBP4.37□□□□□ -1.71
RFC1-202ENST00000381897 NCKAP5O14513 1909 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 A0A096LNJ9 63 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 C11orf86A6NJI1 115 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 FAM19A3Q7Z5A8 133 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 C16orf74Q96GX8 76 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 LENEPQ9Y5L5 61 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 FREM1Q5H8C1 2179 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 TRAV12-2A0A075B6T6 113 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 LINC01546A6NGU7 62 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 WFDC9Q8NEX5 89 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 C17orf77Q96MU5 243 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 PIEZO2Q9H5I5 2752 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 CHD8Q9HCK8 2581 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 KRTAP16-1A8MUX0 517 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 IGFBPL1Q8WX77 278 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 CARD19Q96LW7 228 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 MRPL36Q9P0J6 103 aaKnown RBP4.37□□□□□ -1.71
RFC1-202ENST00000381897 ZNRD1Q9P1U0 126 aa4.37□□□□□ -1.71
RFC1-202ENST00000381897 ZFHX2Q9C0A1 2572 aaPredicted RBP4.36□□□□□ -1.71
RFC1-202ENST00000381897 IGHV4-61A0A0C4DH41 118 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 NXPH4O95158 308 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 IGHV4-59P01825 116 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 CMC4P56277 68 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms