RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 PRR14LQ5THK1 2151 aa7.37□□□□□ -1.23
SNX1-202ENST00000380285 IGHV3-30-3P0DP02 117 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 RPL39P62891 51 aaKnown RBP7.36□□□□□ -1.23
SNX1-202ENST00000380285 PIP4P1Q86T03 277 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 C20orf173Q96LM9 149 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 MLST8Q9BVC4 326 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 UBE2BP63146 152 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 C9orf66Q5T8R8 295 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 AJUBAQ96IF1 538 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 LECT2O14960 151 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 GYPEP15421 78 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 NDUFC1O43677 76 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 SPART-AS1P0CW21 52 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 Q96MF0 132 aa7.36□□□□□ -1.23
SNX1-202ENST00000380285 RETNQ9HD89 108 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 IGKV2D-24A0A075B6R9 120 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 DEFB105AQ8NG35 78 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 U3KQK5 164 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 FSTL3O95633 263 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 IGLV2-8P01709 118 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 LTBP2Q14767 1821 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 PRR30Q53SZ7 412 aaPredicted RBP7.35□□□□□ -1.23
SNX1-202ENST00000380285 MBD6Q96DN6 1003 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 RS1O15537 224 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 SEC61GP60059 68 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 CLPSL2Q6UWE3 100 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 IGLC6P0CF74 106 aa7.35□□□□□ -1.23
SNX1-202ENST00000380285 TET2Q6N021 2002 aaPredicted RBP7.34□□□□□ -1.23
SNX1-202ENST00000380285 TRBV12-3P01733 135 aa7.34□□□□□ -1.23
SNX1-202ENST00000380285 PRB1P04280 392 aa7.34□□□□□ -1.23
SNX1-202ENST00000380285 CLEC2BQ92478 149 aa7.34□□□□□ -1.23
SNX1-202ENST00000380285 NEXN-AS1Q8NBZ9 246 aa7.34□□□□□ -1.23
SNX1-202ENST00000380285 TMEM263Q8WUH6 116 aaKnown RBP7.34□□□□□ -1.23
SNX1-202ENST00000380285 TRBV30A0A0K0K1B3 111 aa7.34□□□□□ -1.23
SNX1-202ENST00000380285 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
SNX1-202ENST00000380285 DEFB112Q30KQ8 113 aa7.34□□□□□ -1.24
SNX1-202ENST00000380285 RITA1Q96K30 269 aa7.34□□□□□ -1.24
SNX1-202ENST00000380285 ZMAT4Q9H898 229 aa7.34□□□□□ -1.24
SNX1-202ENST00000380285 IGKV1D-37A0A075B6S9 117 aa7.33□□□□□ -1.24
SNX1-202ENST00000380285 PROP1O75360 226 aa7.33□□□□□ -1.24
SNX1-202ENST00000380285 WT1P19544 449 aaPredicted RBP7.33□□□□□ -1.24
SNX1-202ENST00000380285 TP73-AS1Q9UF72 201 aa7.33□□□□□ -1.24
SNX1-202ENST00000380285 COL4A3Q01955 1670 aa7.33□□□□□ -1.24
SNX1-202ENST00000380285 MIR7-3HGQ8N6C7 128 aa7.33□□□□□ -1.24
SNX1-202ENST00000380285 HHLA3Q9XRX5 114 aa7.33□□□□□ -1.24
SNX1-202ENST00000380285 TIMM17BO60830 172 aa7.33□□□□□ -1.24
SNX1-202ENST00000380285 C14orf132Q9NPU4 83 aa7.33□□□□□ -1.24
SNX1-202ENST00000380285 PRAC2D3DTV9 90 aa7.33□□□□□ -1.24
SNX1-202ENST00000380285 IGHV4-59P01825 116 aa7.32□□□□□ -1.24
SNX1-202ENST00000380285 C1orf195Q5TG92 126 aa7.32□□□□□ -1.24
SNX1-202ENST00000380285 RNF183Q96D59 192 aa7.32□□□□□ -1.24
SNX1-202ENST00000380285 A0A0J9YX75 114 aa7.32□□□□□ -1.24
SNX1-202ENST00000380285 TIRAPP58753 221 aa7.32□□□□□ -1.24
SNX1-202ENST00000380285 RPL18AQ02543 176 aaKnown RBP7.32□□□□□ -1.24
SNX1-202ENST00000380285 UPK3BQ9BT76 320 aa7.32□□□□□ -1.24
SNX1-202ENST00000380285 Q6ZQT7 251 aa7.32□□□□□ -1.24
SNX1-202ENST00000380285 C4orf3Q8WVX3 66 aa7.32□□□□□ -1.24
SNX1-202ENST00000380285 NFE4Q86UQ8 179 aa7.31□□□□□ -1.24
SNX1-202ENST00000380285 DKK4Q9UBT3 224 aa7.31□□□□□ -1.24
SNX1-202ENST00000380285 PRB2P02812 416 aaPredicted RBP7.31□□□□□ -1.24
SNX1-202ENST00000380285 TTTY13Q9BZ97 58 aa7.31□□□□□ -1.24
SNX1-202ENST00000380285 FAM236DA0A1B0GTK5 79 aa7.31□□□□□ -1.24
SNX1-202ENST00000380285 FAM236CP0DP71 79 aa7.31□□□□□ -1.24
SNX1-202ENST00000380285 COX7BP24311 80 aa7.31□□□□□ -1.24
SNX1-202ENST00000380285 EIF4EBP1Q13541 118 aaPredicted RBP7.31□□□□□ -1.24
SNX1-202ENST00000380285 PTH2Q96A98 100 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 UFSP1Q6NVU6 142 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 SPRY4Q9C004 299 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 SPAG11BQ08648 103 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 SPRNQ5BIV9 151 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 FBXL19-AS1Q494R0 122 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 MT-ATP8P03928 68 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 CLUHP3Q96NS8 147 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 NDUFC2-KCTD14E9PQ53 114 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 SLURP1P55000 103 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 RBX1P62877 108 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 GDF5OSQ5U4N7 250 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 DAND5Q8N907 189 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 A0A096LPF7 62 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 TMEM223A0PJW6 202 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 CCL18P55774 89 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 FAM222AQ5U5X8 452 aa7.3□□□□□ -1.24
SNX1-202ENST00000380285 A0A0U1RQV1 116 aa7.29□□□□□ -1.24
SNX1-202ENST00000380285 IBA57-AS1B1ANH7 110 aa7.29□□□□□ -1.24
SNX1-202ENST00000380285 FRMD6-AS1P0C7T7 363 aa7.29□□□□□ -1.24
SNX1-202ENST00000380285 DAZAP2Q15038 168 aaPredicted RBP7.29□□□□□ -1.24
SNX1-202ENST00000380285 E7EUB6 86 aa7.29□□□□□ -1.24
SNX1-202ENST00000380285 APRG1Q8IVJ8 170 aa7.29□□□□□ -1.24
SNX1-202ENST00000380285 DSCAMO60469 2012 aa7.29□□□□□ -1.24
SNX1-202ENST00000380285 GPR179Q6PRD1 2367 aa7.29□□□□□ -1.24
SNX1-202ENST00000380285 A0A0J9YY99 117 aa7.29□□□□□ -1.24
SNX1-202ENST00000380285 INSL3P51460 131 aa7.29□□□□□ -1.24
SNX1-202ENST00000380285 TEX49A0A1B0GTD5 131 aa7.28□□□□□ -1.24
SNX1-202ENST00000380285 BPY2O14599 106 aa7.28□□□□□ -1.24
SNX1-202ENST00000380285 PYGO1Q9Y3Y4 419 aa7.28□□□□□ -1.24
SNX1-202ENST00000380285 ZNF295-AS1Q8N0V1 137 aa7.28□□□□□ -1.24
SNX1-202ENST00000380285 IGHV4-28A0A0C4DH34 117 aa7.28□□□□□ -1.24
SNX1-202ENST00000380285 PRRC2AP48634 2157 aaKnown RBP7.28□□□□□ -1.24
SNX1-202ENST00000380285 Q6Q795 121 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms