RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 LINC01549A6NIU2 74 aa8.95□□□□□ -0.98
RFC3-201ENST00000380071 PAPPA-AS1Q5QFB9 102 aa8.95□□□□□ -0.98
RFC3-201ENST00000380071 CREBBPQ92793 2442 aa8.95□□□□□ -0.98
RFC3-201ENST00000380071 ACACBO00763 2458 aa8.95□□□□□ -0.98
RFC3-201ENST00000380071 IGHV3-73A0A0B4J1V6 119 aa8.94□□□□□ -0.98
RFC3-201ENST00000380071 A0A0J9YY99 117 aa8.94□□□□□ -0.98
RFC3-201ENST00000380071 HERVK_113P61574 105 aa8.94□□□□□ -0.98
RFC3-201ENST00000380071 HIST2H2BDQ6DRA6 164 aa8.94□□□□□ -0.98
RFC3-201ENST00000380071 TRPT1Q86TN4 253 aaKnown RBP8.94□□□□□ -0.98
RFC3-201ENST00000380071 PGPEP1Q9NXJ5 209 aa8.94□□□□□ -0.98
RFC3-201ENST00000380071 FAM208BQ5VWN6 2430 aa8.94□□□□□ -0.98
RFC3-201ENST00000380071 PROK1P58294 105 aa8.94□□□□□ -0.98
RFC3-201ENST00000380071 GTSF1LQ9H1H1 148 aa8.94□□□□□ -0.98
RFC3-201ENST00000380071 TSSC4Q9Y5U2 329 aaPredicted RBP8.94□□□□□ -0.98
RFC3-201ENST00000380071 INSL3P51460 131 aa8.93□□□□□ -0.98
RFC3-201ENST00000380071 DEFB131AP59861 70 aa8.93□□□□□ -0.98
RFC3-201ENST00000380071 KRTAP10-9P60411 292 aa8.93□□□□□ -0.98
RFC3-201ENST00000380071 GAGE13Q4V321 117 aa8.93□□□□□ -0.98
RFC3-201ENST00000380071 SFTA2Q6UW10 78 aa8.93□□□□□ -0.98
RFC3-201ENST00000380071 DUX3Q96PT4 197 aa8.93□□□□□ -0.98
RFC3-201ENST00000380071 FSHBP01225 129 aa8.93□□□□□ -0.98
RFC3-201ENST00000380071 IGHV4-31P0DP07 118 aa8.93□□□□□ -0.98
RFC3-201ENST00000380071 NSUN5P1Q3KNT7 163 aa8.93□□□□□ -0.98
RFC3-201ENST00000380071 SPAG8Q99932 426 aaPredicted RBP8.93□□□□□ -0.98
RFC3-201ENST00000380071 MRPL16Q9NX20 251 aaKnown RBP8.93□□□□□ -0.98
RFC3-201ENST00000380071 UBE2D1P51668 147 aa8.92□□□□□ -0.98
RFC3-201ENST00000380071 AKAP9Q99996 3911 aa8.92□□□□□ -0.98
RFC3-201ENST00000380071 I3L3M4 83 aa8.92□□□□□ -0.98
RFC3-201ENST00000380071 APOMO95445 188 aa8.92□□□□□ -0.98
RFC3-201ENST00000380071 AZU1P20160 251 aa8.92□□□□□ -0.98
RFC3-201ENST00000380071 RHOHQ15669 191 aa8.92□□□□□ -0.98
RFC3-201ENST00000380071 RNF152Q8N8N0 203 aa8.92□□□□□ -0.98
RFC3-201ENST00000380071 C20orf203Q8NBC4 194 aa8.92□□□□□ -0.98
RFC3-201ENST00000380071 AMELXQ99217 191 aa8.92□□□□□ -0.98
RFC3-201ENST00000380071 TEX15Q9BXT5 2789 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 TRGV11A0A075B6L2 103 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 RBMY1BA6NDE4 496 aaKnown RBP8.91□□□□□ -0.98
RFC3-201ENST00000380071 RBMY1EA6NEQ0 496 aaKnown RBP8.91□□□□□ -0.98
RFC3-201ENST00000380071 RBMY1DP0C7P1 496 aaKnown RBP8.91□□□□□ -0.98
RFC3-201ENST00000380071 Q9UF83 564 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 CR1P17927 2039 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 CUBNO60494 3623 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 ZFYVE26Q68DK2 2539 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 IGHV3-64A0A075B6Q5 118 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 TMEM238LA0A1B0GVL6 79 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 GAGE12HA6NDE8 117 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 A6NJY4 79 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 J3QQQ9 107 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 NFE4Q86UQ8 179 aa8.91□□□□□ -0.98
RFC3-201ENST00000380071 TSPAN13O95857 204 aa8.9□□□□□ -0.98
RFC3-201ENST00000380071 IGHV3-30P01768 117 aa8.9□□□□□ -0.98
RFC3-201ENST00000380071 IGHV3-30-5P0DP03 117 aa8.9□□□□□ -0.98
RFC3-201ENST00000380071 SMAGPQ0VAQ4 97 aa8.9□□□□□ -0.98
RFC3-201ENST00000380071 SLC25A29Q8N8R3 303 aa8.9□□□□□ -0.98
RFC3-201ENST00000380071 H3BMM0 161 aa8.9□□□□□ -0.99
RFC3-201ENST00000380071 ZNF462Q96JM2 2506 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 IGLV4-3A0A075B6K6 122 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 A0A0J9YXV3 536 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 TMEM223A0PJW6 202 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 SMCPP49901 116 aaPredicted RBP8.89□□□□□ -0.99
RFC3-201ENST00000380071 NDUFA11Q86Y39 141 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 PTPN13Q12923 2485 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 LOC107984156A0A0G2JMH3 177 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 CFC1BP0CG36 223 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 CFC1P0CG37 223 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 LGALS3P17931 250 aaKnown RBP8.89□□□□□ -0.99
RFC3-201ENST00000380071 CEMP1Q6PRD7 247 aaPredicted RBP8.89□□□□□ -0.99
RFC3-201ENST00000380071 ARL17AQ8IVW1 177 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 TMEM61Q8N0U2 210 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 BBC3Q96PG8 261 aaPredicted RBP8.89□□□□□ -0.99
RFC3-201ENST00000380071 SIGMAR1Q99720 223 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 SPATA25Q9BR10 227 aa8.89□□□□□ -0.99
RFC3-201ENST00000380071 NBPF19A0A087WUL8 3843 aa8.88□□□□□ -0.99
RFC3-201ENST00000380071 J3QR89 54 aa8.88□□□□□ -0.99
RFC3-201ENST00000380071 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
RFC3-201ENST00000380071 CFAP126Q5VTH2 177 aa8.88□□□□□ -0.99
RFC3-201ENST00000380071 Q6ZSN1 163 aa8.88□□□□□ -0.99
RFC3-201ENST00000380071 VCX2Q9H322 139 aa8.88□□□□□ -0.99
RFC3-201ENST00000380071 LRRK2Q5S007 2527 aa8.88□□□□□ -0.99
RFC3-201ENST00000380071 RHODO00212 210 aa8.88□□□□□ -0.99
RFC3-201ENST00000380071 PSMB2P49721 201 aa8.87□□□□□ -0.99
RFC3-201ENST00000380071 KHDC1LQ5JSQ8 128 aa8.87□□□□□ -0.99
RFC3-201ENST00000380071 DLX4Q92988 240 aaPredicted RBP8.87□□□□□ -0.99
RFC3-201ENST00000380071 NACAE9PAV3 2078 aa8.87□□□□□ -0.99
RFC3-201ENST00000380071 ABCA12Q86UK0 2595 aa8.87□□□□□ -0.99
RFC3-201ENST00000380071 LEPROTO15243 131 aa8.86□□□□□ -0.99
RFC3-201ENST00000380071 UBE2D3P61077 147 aa8.86□□□□□ -0.99
RFC3-201ENST00000380071 UBE2D2P62837 147 aa8.86□□□□□ -0.99
RFC3-201ENST00000380071 RNASE13Q5GAN3 156 aaKnown RBP8.86□□□□□ -0.99
RFC3-201ENST00000380071 A8MTW9 85 aa8.86□□□□□ -0.99
RFC3-201ENST00000380071 CD28P10747 220 aa8.86□□□□□ -0.99
RFC3-201ENST00000380071 M0R2P5 195 aa8.85□□□□□ -0.99
RFC3-201ENST00000380071 Q5PR19 223 aa8.85□□□□□ -0.99
RFC3-201ENST00000380071 Q8N2B8 174 aa8.85□□□□□ -0.99
RFC3-201ENST00000380071 SPXQ9BT56 116 aa8.85□□□□□ -0.99
RFC3-201ENST00000380071 TNFRSF18Q9Y5U5 241 aa8.85□□□□□ -0.99
RFC3-201ENST00000380071 C1QTNF4Q9BXJ3 329 aa8.85□□□□□ -0.99
RFC3-201ENST00000380071 MAP6D1Q9H9H5 199 aa8.85□□□□□ -0.99
RFC3-201ENST00000380071 EIF4EBP3O60516 100 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms