RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 PRSS46E5RG02 174 aa4.99□□□□□ -1.61
NEDD9-202ENST00000379446 MIFP14174 115 aa4.99□□□□□ -1.61
NEDD9-202ENST00000379446 RPL18AQ02543 176 aaKnown RBP4.99□□□□□ -1.61
NEDD9-202ENST00000379446 C14orf178Q8N769 122 aaPredicted RBP4.99□□□□□ -1.61
NEDD9-202ENST00000379446 THAP8Q8NA92 274 aa4.99□□□□□ -1.61
NEDD9-202ENST00000379446 ZNF503Q96F45 646 aa4.99□□□□□ -1.61
NEDD9-202ENST00000379446 S100A7L2Q5SY68 101 aa4.99□□□□□ -1.61
NEDD9-202ENST00000379446 GDF5OSQ5U4N7 250 aa4.99□□□□□ -1.61
NEDD9-202ENST00000379446 Q6ZS46 218 aa4.99□□□□□ -1.61
NEDD9-202ENST00000379446 NDUFA4L2Q9NRX3 87 aa4.99□□□□□ -1.61
NEDD9-202ENST00000379446 MRPL36Q9P0J6 103 aaKnown RBP4.99□□□□□ -1.61
NEDD9-202ENST00000379446 HHLA3Q9XRX5 114 aa4.99□□□□□ -1.61
NEDD9-202ENST00000379446 CRYGDP07320 174 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 LINC00158P58513 81 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 PRELID3AQ96N28 172 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 COL6A3P12111 3177 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 VWC2LB2RUY7 222 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 LECT2O14960 151 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 NDUFA3O95167 84 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 PROK1P58294 105 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 NFE4Q86UQ8 179 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 RITA1Q96K30 269 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 COX8AP10176 69 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 C14orf177Q52M58 125 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 SMIM20Q8N5G0 67 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 MAP6D1Q9H9H5 199 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 MUC4Q99102 2169 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 TRBV20-1A0A075B6N2 111 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 IGHV4-28A0A0C4DH34 117 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 A0A1B0GUT8 65 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 SPXQ9BT56 116 aa4.98□□□□□ -1.61
NEDD9-202ENST00000379446 A8MWV9 139 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 D6R8Y8 96 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 ARMS2P0C7Q2 107 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 TMEM243Q9BU79 118 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 WI2-2373I1.2A0A1W2PRP0 233 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 INS-IGF2F8WCM5 200 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 SIVA1O15304 175 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 TIRAPP58753 221 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 PATE2Q6UY27 113 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 LY6G5BQ8NDX9 201 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 NPBQ8NG41 125 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 IFI27L1Q96BM0 104 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 TIMM17AQ99595 171 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 CYSLTR1Q9Y271 337 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 STAB2Q8WWQ8 2551 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 UNQ9165/PRO28630Q6UXU0 137 aa4.97□□□□□ -1.61
NEDD9-202ENST00000379446 A0A1B0GW15 77 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 SMIM27A0A1W2PRY6 76 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 C16orf90A8MZG2 172 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 FXYD2P54710 66 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 KLF5Q13887 457 aaPredicted RBP4.96□□□□□ -1.61
NEDD9-202ENST00000379446 POU2AF1Q16633 256 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 PRIMA1Q86XR5 153 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 AMN1Q8IY45 258 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 FAM167A-AS1Q96KT0 104 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 C20orf78Q9BR46 151 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 SCRT2Q9NQ03 307 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 DKK2Q9UBU2 259 aa4.96□□□□□ -1.61
NEDD9-202ENST00000379446 WDFY3Q8IZQ1 3526 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 F8WEM9 126 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 TCRAP04437 139 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 LGALS3P17931 250 aaKnown RBP4.96□□□□□ -1.62
NEDD9-202ENST00000379446 CHCHD1Q96BP2 118 aaKnown RBP4.96□□□□□ -1.62
NEDD9-202ENST00000379446 FXYD5Q96DB9 178 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 CITED1Q99966 193 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 SHANK2-AS3Q9BTD1 123 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 PRSS29PA6NIE9 313 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 FNDC10F2Z333 226 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 SLC25A20O43772 301 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 ZC2HC1BQ5TFG8 222 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 PRO0255Q9UI72 69 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 TRAV8-2A0A0B4J237 113 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 IGLV2-8P01709 118 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 XCL1P47992 114 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 CHAC1Q9BUX1 264 aa4.96□□□□□ -1.62
NEDD9-202ENST00000379446 TET2Q6N021 2002 aaPredicted RBP4.96□□□□□ -1.62
NEDD9-202ENST00000379446 TMEM213A2RRL7 107 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 BUB3O43684 328 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 PTH2Q96A98 100 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 FMC1Q96HJ9 113 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 UBE2D1P51668 147 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 DEFB1P60022 68 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 C8orf31Q8N9H6 132 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 COPS9Q8WXC6 57 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 CAMK2N2Q96S95 79 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 TRBV7-9A0A0J9YWB2 115 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 GAGE2EQ4V326 116 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 BOD1L2Q8IYS8 172 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 GAGE2DQ9UEU5 116 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 UTP20O75691 2785 aaKnown RBP4.95□□□□□ -1.62
NEDD9-202ENST00000379446 C3orf84H3BNL1 204 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 K7EMT4 169 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 TNFRSF6BO95407 300 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 LTAP01374 205 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 KPRPQ5T749 579 aaPredicted RBP4.95□□□□□ -1.62
NEDD9-202ENST00000379446 C17orf77Q96MU5 243 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 SCGB3A1Q96QR1 104 aa4.95□□□□□ -1.62
NEDD9-202ENST00000379446 ODF3BA8MYP8 253 aa4.94□□□□□ -1.62
NEDD9-202ENST00000379446 FAM229AH3BQW9 127 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms