RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 IGHV3-73A0A0B4J1V6 119 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 LST1O00453 97 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 IGHV3-30-3P0DP02 117 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 COX6B1P14854 86 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 Q6ZSV7 163 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 PIP4P1Q86T03 277 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 RNF5Q99942 180 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 MRAPQ8TCY5 172 aa8.33□□□□□ -1.08
USP6NL-202ENST00000379237 A0A0U1RQV1 116 aa8.32□□□□□ -1.08
USP6NL-202ENST00000379237 ZNRF2Q8NHG8 242 aa8.32□□□□□ -1.08
USP6NL-202ENST00000379237 KIR2DL5BQ8NHK3 375 aa8.32□□□□□ -1.08
USP6NL-202ENST00000379237 C9orf139Q6ZV77 190 aa8.32□□□□□ -1.08
USP6NL-202ENST00000379237 PTPN13Q12923 2485 aa8.32□□□□□ -1.08
USP6NL-202ENST00000379237 OVOL1O14753 267 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 SUMO4Q6EEV6 95 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 IGLV3-9A0A075B6K5 115 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 ZNF883P0CG24 379 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 BRK1Q8WUW1 75 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 JPT2Q9H910 190 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 IGHV7-4-1A0A0J9YVY3 117 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 CRPP02741 224 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 CTSGP08311 255 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 BSPH1Q075Z2 132 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 SERP2Q8N6R1 65 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 LINC00574Q9H8X3 128 aa8.31□□□□□ -1.08
USP6NL-202ENST00000379237 LOC400499M0QZD8 3231 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 IGLV4-69A0A075B6H9 119 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 LINC01546A6NGU7 62 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 SOCS3O14543 225 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
USP6NL-202ENST00000379237 PRIMA1Q86XR5 153 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 Q9HAA7 133 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 RBM3P98179 157 aaKnown RBP8.3□□□□□ -1.08
USP6NL-202ENST00000379237 TOMM7Q9P0U1 55 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 C2CD3Q4AC94 2353 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 C19orf54Q5BKX5 351 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 WFDC11Q8NEX6 87 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 DEFB1P60022 68 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 C20orf197Q8N268 126 aa8.3□□□□□ -1.08
USP6NL-202ENST00000379237 F6UB75 175 aa8.29□□□□□ -1.08
USP6NL-202ENST00000379237 BUB3O43684 328 aa8.29□□□□□ -1.08
USP6NL-202ENST00000379237 NXPH4O95158 308 aa8.29□□□□□ -1.08
USP6NL-202ENST00000379237 SMAD5-AS1Q9Y6J3 95 aa8.29□□□□□ -1.08
USP6NL-202ENST00000379237 A0A0G2JNJ9 132 aa8.29□□□□□ -1.08
USP6NL-202ENST00000379237 LY6DQ14210 128 aa8.29□□□□□ -1.08
USP6NL-202ENST00000379237 MIAQ16674 131 aa8.29□□□□□ -1.08
USP6NL-202ENST00000379237 Q9UFV3 132 aa8.29□□□□□ -1.08
USP6NL-202ENST00000379237 ZFHX4Q86UP3 3567 aa8.28□□□□□ -1.08
USP6NL-202ENST00000379237 IGLV11-55A0A075B6I3 123 aa8.28□□□□□ -1.08
USP6NL-202ENST00000379237 PFN2P35080 140 aa8.28□□□□□ -1.08
USP6NL-202ENST00000379237 IGF1P05019 195 aa8.28□□□□□ -1.08
USP6NL-202ENST00000379237 LINC01560Q8TB33 94 aa8.28□□□□□ -1.08
USP6NL-202ENST00000379237 C14orf132Q9NPU4 83 aa8.28□□□□□ -1.08
USP6NL-202ENST00000379237 TRBV7-1A0A0A6YYK4 115 aa8.28□□□□□ -1.08
USP6NL-202ENST00000379237 IGKV3OR2-268A0A0C4DH90 116 aa8.28□□□□□ -1.08
USP6NL-202ENST00000379237 NBEAQ8NFP9 2946 aa8.28□□□□□ -1.08
USP6NL-202ENST00000379237 GHRHP01286 108 aa8.28□□□□□ -1.08
USP6NL-202ENST00000379237 RPS28P62857 69 aaKnown RBP8.28□□□□□ -1.08
USP6NL-202ENST00000379237 PCSK5Q92824 1860 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 USP17L23D6RBM5 183 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 OVOL3O00110 214 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 S100A7L2Q5SY68 101 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 RNASE6Q93091 150 aaKnown RBP8.27□□□□□ -1.09
USP6NL-202ENST00000379237 FANCD2OSQ96PS1 177 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 A0A087WVE0 104 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 IGHV3-11P01762 117 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 CRYGDP07320 174 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 TIRAPP58753 221 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 V9GYY9 64 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 LTBP2Q14767 1821 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 TRAV23DV6A0A075B6W5 121 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 CXCL5P42830 114 aa8.27□□□□□ -1.09
USP6NL-202ENST00000379237 COX7A2LO14548 114 aa8.26□□□□□ -1.09
USP6NL-202ENST00000379237 Q9H8V8 135 aa8.26□□□□□ -1.09
USP6NL-202ENST00000379237 ZNF580Q9UK33 172 aa8.26□□□□□ -1.09
USP6NL-202ENST00000379237 A8MZ25 164 aa8.26□□□□□ -1.09
USP6NL-202ENST00000379237 CRYGAP11844 174 aa8.26□□□□□ -1.09
USP6NL-202ENST00000379237 TMEM61Q8N0U2 210 aa8.26□□□□□ -1.09
USP6NL-202ENST00000379237 FAM236DA0A1B0GTK5 79 aa8.26□□□□□ -1.09
USP6NL-202ENST00000379237 IGIPA6NJ69 53 aa8.26□□□□□ -1.09
USP6NL-202ENST00000379237 FAM236CP0DP71 79 aa8.26□□□□□ -1.09
USP6NL-202ENST00000379237 PRRC2AP48634 2157 aaKnown RBP8.25□□□□□ -1.09
USP6NL-202ENST00000379237 KNCNA6PVL3 124 aa8.25□□□□□ -1.09
USP6NL-202ENST00000379237 RPL35AP18077 110 aaKnown RBP8.25□□□□□ -1.09
USP6NL-202ENST00000379237 NCOR2Q9Y618 2525 aa8.25□□□□□ -1.09
USP6NL-202ENST00000379237 IGHV1-58A0A0C4DH39 117 aa8.25□□□□□ -1.09
USP6NL-202ENST00000379237 MBD3L4A6NDZ8 208 aaPredicted RBP8.25□□□□□ -1.09
USP6NL-202ENST00000379237 MBD3L3A6NE82 208 aaPredicted RBP8.25□□□□□ -1.09
USP6NL-202ENST00000379237 MBD3L5A6NJ08 208 aaPredicted RBP8.25□□□□□ -1.09
USP6NL-202ENST00000379237 C9orf47Q6ZRZ4 202 aa8.25□□□□□ -1.09
USP6NL-202ENST00000379237 IGHG2P01859 326 aa8.25□□□□□ -1.09
USP6NL-202ENST00000379237 EBI3Q14213 229 aa8.25□□□□□ -1.09
USP6NL-202ENST00000379237 COX8CQ7Z4L0 72 aa8.24□□□□□ -1.09
USP6NL-202ENST00000379237 MOB4Q9Y3A3 225 aa8.24□□□□□ -1.09
USP6NL-202ENST00000379237 G3V318 75 aa8.24□□□□□ -1.09
USP6NL-202ENST00000379237 LINC00158P58513 81 aa8.24□□□□□ -1.09
USP6NL-202ENST00000379237 IGHV1-69P01742 117 aa8.24□□□□□ -1.09
USP6NL-202ENST00000379237 MALP21145 153 aa8.24□□□□□ -1.09
USP6NL-202ENST00000379237 OVOL2Q9BRP0 275 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 254.4 ms