RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CXorf1O96002 111 aa11.42□□□□□ -0.58
PDLIM4-202ENST00000379018 SUN5Q8TC36 379 aa11.42□□□□□ -0.58
PDLIM4-202ENST00000379018 SFRP2Q96HF1 295 aa11.42□□□□□ -0.58
PDLIM4-202ENST00000379018 PSMG3Q9BT73 122 aaPredicted RBP11.42□□□□□ -0.58
PDLIM4-202ENST00000379018 SEC11CQ9BY50 192 aa11.42□□□□□ -0.58
PDLIM4-202ENST00000379018 SH2D1AO60880 128 aa11.41□□□□□ -0.58
PDLIM4-202ENST00000379018 TRBV6-8A0A0A6YYG3 113 aa11.4□□□□□ -0.58
PDLIM4-202ENST00000379018 TRBV10-1A0A0K0K1A3 114 aa11.4□□□□□ -0.58
PDLIM4-202ENST00000379018 PEX7O00628 323 aa11.4□□□□□ -0.58
PDLIM4-202ENST00000379018 NDUFS6O75380 124 aaKnown RBP11.4□□□□□ -0.58
PDLIM4-202ENST00000379018 ATP6V0CP27449 155 aa11.4□□□□□ -0.58
PDLIM4-202ENST00000379018 ZNF56Q15929 161 aa11.4□□□□□ -0.58
PDLIM4-202ENST00000379018 C9orf163Q8N9P6 203 aa11.4□□□□□ -0.58
PDLIM4-202ENST00000379018 DPH3Q96FX2 82 aa11.4□□□□□ -0.58
PDLIM4-202ENST00000379018 ACTR3CQ9C0K3 210 aaPredicted RBP11.4□□□□□ -0.58
PDLIM4-202ENST00000379018 CRIP1P50238 77 aa11.39□□□□□ -0.59
PDLIM4-202ENST00000379018 SERF2P84101 59 aa11.39□□□□□ -0.59
PDLIM4-202ENST00000379018 Q6ZRU5 148 aa11.39□□□□□ -0.59
PDLIM4-202ENST00000379018 ZFP82Q8N141 532 aa11.39□□□□□ -0.59
PDLIM4-202ENST00000379018 TRAV1-1A0A0B4J248 108 aa11.38□□□□□ -0.59
PDLIM4-202ENST00000379018 A0A1W2PRE2 83 aa11.38□□□□□ -0.59
PDLIM4-202ENST00000379018 MBP02144 154 aa11.38□□□□□ -0.59
PDLIM4-202ENST00000379018 MIAQ16674 131 aa11.38□□□□□ -0.59
PDLIM4-202ENST00000379018 FAM162BQ5T6X4 162 aa11.38□□□□□ -0.59
PDLIM4-202ENST00000379018 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
PDLIM4-202ENST00000379018 SVBPQ8N300 66 aa11.38□□□□□ -0.59
PDLIM4-202ENST00000379018 NEXN-AS1Q8NBZ9 246 aa11.38□□□□□ -0.59
PDLIM4-202ENST00000379018 GAGE6Q13070 117 aa11.37□□□□□ -0.59
PDLIM4-202ENST00000379018 DNLZQ5SXM8 178 aa11.37□□□□□ -0.59
PDLIM4-202ENST00000379018 IGLV10-54A0A075B6I4 117 aa11.36□□□□□ -0.59
PDLIM4-202ENST00000379018 RPL19P84098 196 aaKnown RBP11.36□□□□□ -0.59
PDLIM4-202ENST00000379018 LINC00269Q8N2A0 174 aa11.36□□□□□ -0.59
PDLIM4-202ENST00000379018 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
PDLIM4-202ENST00000379018 LRP2P98164 4655 aa11.36□□□□□ -0.59
PDLIM4-202ENST00000379018 CHTF8P0CG12 524 aa11.35□□□□□ -0.59
PDLIM4-202ENST00000379018 UBE2G1P62253 170 aa11.35□□□□□ -0.59
PDLIM4-202ENST00000379018 SDIM1Q6ZPB5 146 aa11.35□□□□□ -0.59
PDLIM4-202ENST00000379018 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.35□□□□□ -0.59
PDLIM4-202ENST00000379018 OR10G8Q8NGN5 311 aa11.35□□□□□ -0.59
PDLIM4-202ENST00000379018 hDV102S1A0JD36 115 aa11.34□□□□□ -0.59
PDLIM4-202ENST00000379018 ADCYAP1P18509 176 aa11.34□□□□□ -0.59
PDLIM4-202ENST00000379018 SSTP61278 116 aa11.34□□□□□ -0.59
PDLIM4-202ENST00000379018 ODF1Q14990 250 aa11.34□□□□□ -0.59
PDLIM4-202ENST00000379018 PEA15Q15121 130 aa11.34□□□□□ -0.59
PDLIM4-202ENST00000379018 MUC21A0A0G2JKD1 596 aa11.33□□□□□ -0.6
PDLIM4-202ENST00000379018 MUC21A0A140T8X8 626 aa11.33□□□□□ -0.6
PDLIM4-202ENST00000379018 F5H697 171 aa11.33□□□□□ -0.6
PDLIM4-202ENST00000379018 SNAPINO95295 136 aa11.33□□□□□ -0.6
PDLIM4-202ENST00000379018 RAB4BP61018 213 aa11.33□□□□□ -0.6
PDLIM4-202ENST00000379018 PKIAP61925 76 aa11.33□□□□□ -0.6
PDLIM4-202ENST00000379018 RBX1P62877 108 aa11.33□□□□□ -0.6
PDLIM4-202ENST00000379018 LINC01559Q495D7 138 aa11.33□□□□□ -0.6
PDLIM4-202ENST00000379018 NKX6-2Q9C056 277 aaPredicted RBP11.33□□□□□ -0.6
PDLIM4-202ENST00000379018 RNF213Q63HN8 5207 aa11.32□□□□□ -0.6
PDLIM4-202ENST00000379018 FAM74A7A6NL05 159 aa11.32□□□□□ -0.6
PDLIM4-202ENST00000379018 APOC3P02656 99 aa11.32□□□□□ -0.6
PDLIM4-202ENST00000379018 ZNF726P1Q15940 193 aa11.32□□□□□ -0.6
PDLIM4-202ENST00000379018 OR10AG1Q8NH19 301 aa11.32□□□□□ -0.6
PDLIM4-202ENST00000379018 MBD3L1Q8WWY6 194 aa11.32□□□□□ -0.6
PDLIM4-202ENST00000379018 HIST1H2BAQ96A08 127 aa11.32□□□□□ -0.6
PDLIM4-202ENST00000379018 ZFP30Q9Y2G7 519 aa11.32□□□□□ -0.6
PDLIM4-202ENST00000379018 TNXBP22105 4242 aa11.31□□□□□ -0.6
PDLIM4-202ENST00000379018 A0A087WYN8 130 aa11.31□□□□□ -0.6
PDLIM4-202ENST00000379018 F8W036 122 aa11.31□□□□□ -0.6
PDLIM4-202ENST00000379018 H2AFB1P0C5Y9 115 aa11.31□□□□□ -0.6
PDLIM4-202ENST00000379018 TAGLN2P37802 199 aaKnown RBP11.31□□□□□ -0.6
PDLIM4-202ENST00000379018 ZNF674Q2M3X9 581 aa11.31□□□□□ -0.6
PDLIM4-202ENST00000379018 AKR1C8PQ5T2L2 129 aa11.31□□□□□ -0.6
PDLIM4-202ENST00000379018 NTM-AS1Q6ZSK4 140 aa11.31□□□□□ -0.6
PDLIM4-202ENST00000379018 FMC1Q96HJ9 113 aa11.31□□□□□ -0.6
PDLIM4-202ENST00000379018 DERL1Q9BUN8 251 aa11.31□□□□□ -0.6
PDLIM4-202ENST00000379018 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
PDLIM4-202ENST00000379018 KRTAP26-1Q6PEX3 210 aa11.3□□□□□ -0.6
PDLIM4-202ENST00000379018 PRR34Q9NV39 138 aa11.3□□□□□ -0.6
PDLIM4-202ENST00000379018 IGHV3-64A0A075B6Q5 118 aa11.29□□□□□ -0.6
PDLIM4-202ENST00000379018 PHOX2AO14813 284 aa11.29□□□□□ -0.6
PDLIM4-202ENST00000379018 SRSF3P84103 164 aaKnown RBP11.29□□□□□ -0.6
PDLIM4-202ENST00000379018 PRR27Q6MZM9 219 aa11.29□□□□□ -0.6
PDLIM4-202ENST00000379018 CLRN3Q8NCR9 226 aa11.29□□□□□ -0.6
PDLIM4-202ENST00000379018 FAM213BQ8TBF2 198 aa11.29□□□□□ -0.6
PDLIM4-202ENST00000379018 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
PDLIM4-202ENST00000379018 TRBV25-1A0A075B6N4 114 aa11.28□□□□□ -0.6
PDLIM4-202ENST00000379018 TRBV6-1A0A0K0K1D8 114 aa11.28□□□□□ -0.6
PDLIM4-202ENST00000379018 AKR1C3P42330 323 aa11.28□□□□□ -0.6
PDLIM4-202ENST00000379018 REG3AQ06141 175 aa11.28□□□□□ -0.6
PDLIM4-202ENST00000379018 SCO1O75880 301 aa11.27□□□□□ -0.61
PDLIM4-202ENST00000379018 LTAP01374 205 aa11.27□□□□□ -0.61
PDLIM4-202ENST00000379018 CNBPP62633 177 aaKnown RBP11.27□□□□□ -0.61
PDLIM4-202ENST00000379018 CIRBPQ14011 172 aaKnown RBP11.27□□□□□ -0.61
PDLIM4-202ENST00000379018 TMEM97Q5BJF2 176 aa11.27□□□□□ -0.61
PDLIM4-202ENST00000379018 SPANXN1Q5VSR9 72 aa11.27□□□□□ -0.61
PDLIM4-202ENST00000379018 CST9LP1Q5W188 147 aa11.27□□□□□ -0.61
PDLIM4-202ENST00000379018 COX8CQ7Z4L0 72 aa11.27□□□□□ -0.61
PDLIM4-202ENST00000379018 C7orf33Q8WU49 177 aa11.27□□□□□ -0.61
PDLIM4-202ENST00000379018 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.26□□□□□ -0.61
PDLIM4-202ENST00000379018 FHITP49789 147 aa11.26□□□□□ -0.61
PDLIM4-202ENST00000379018 SPACA4Q8TDM5 124 aa11.26□□□□□ -0.61
PDLIM4-202ENST00000379018 SLPIP03973 132 aa11.25□□□□□ -0.61
PDLIM4-202ENST00000379018 SMIM17P0DL12 118 aa11.25□□□□□ -0.61
PDLIM4-202ENST00000379018 GTSF1Q8WW33 167 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms