RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 HERVK_113P63121 156 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 PRR9Q5T870 116 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 CEMP1Q6PRD7 247 aaPredicted RBP4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 ICOSQ9Y6W8 199 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 MALRD1Q5VYJ5 2156 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 GON4LQ3T8J9 2241 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 TRBV27A0A0K0K1C4 114 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 OOSP1A8MZH6 123 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 M0R1B8 84 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 C22orf24Q9Y442 160 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 SVILO95425 2214 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 MED13Q9UHV7 2174 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 LOC107984640A0A0U1RRK4 108 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 NDUFB3O43676 98 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 CDK2AP2O75956 126 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 COX7CP15954 63 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 NSUN5P1Q3KNT7 163 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 LINC00643Q86TS7 51 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 FAM236AA0A1B0GUQ0 79 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 FAM236BA0A1B0GV22 79 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 LYRM9A8MSI8 78 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 PATE3B3GLJ2 98 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 ZNF56Q15929 161 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 IGFL4Q6B9Z1 124 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 C2orf82Q6UX34 121 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 Q8N6K4 173 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 UPK3BQ9BT76 320 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 A0A0J9YXY3 114 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 RBMY1CP0DJD4 496 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 SPANXN1Q5VSR9 72 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 ZFAND2AQ8N6M9 145 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 FAM104AQ969W3 186 aa4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 ZNF256Q9Y2P7 627 aaPredicted RBP4.92□□□□□ -1.62
CDKAL1-202ENST00000378610 KRTAP21-3Q3LHN1 58 aa4.91□□□□□ -1.62
CDKAL1-202ENST00000378610 F6UB75 175 aa4.91□□□□□ -1.62
CDKAL1-202ENST00000378610 K7ENP7 123 aa4.91□□□□□ -1.62
CDKAL1-202ENST00000378610 RNASE3P12724 160 aaKnown RBP4.91□□□□□ -1.62
CDKAL1-202ENST00000378610 Q6ZSN1 163 aa4.91□□□□□ -1.62
CDKAL1-202ENST00000378610 RNF182Q8N6D2 247 aa4.91□□□□□ -1.62
CDKAL1-202ENST00000378610 KLK15Q9H2R5 256 aa4.91□□□□□ -1.62
CDKAL1-202ENST00000378610 KALRNO60229 2985 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 IGHV4-28A0A0C4DH34 117 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 EPM2AB3EWF7 344 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 OVOL1O14753 267 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 TIMM17BO60830 172 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 RPL35AP18077 110 aaKnown RBP4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 RNASE4P34096 147 aaKnown RBP4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 C9orf153Q5TBE3 101 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 IGFL3Q6UXB1 125 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 LY6G5BQ8NDX9 201 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 FAM218AQ96MZ4 157 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 PRO0628Q9UI54 55 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 CNTRLQ7Z7A1 2325 aa4.9□□□□□ -1.62
CDKAL1-202ENST00000378610 ODF3BA8MYP8 253 aa4.9□□□□□ -1.63
CDKAL1-202ENST00000378610 SOCS3O14543 225 aa4.9□□□□□ -1.63
CDKAL1-202ENST00000378610 LGALS3P17931 250 aaKnown RBP4.9□□□□□ -1.63
CDKAL1-202ENST00000378610 Q5XG85 94 aa4.9□□□□□ -1.63
CDKAL1-202ENST00000378610 NDPQ00604 133 aa4.9□□□□□ -1.63
CDKAL1-202ENST00000378610 INTS1Q8N201 2190 aaKnown RBP4.9□□□□□ -1.63
CDKAL1-202ENST00000378610 ARHGAP32A7KAX9 2087 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 MUC4Q99102 2169 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 IGHV4-39P01824 125 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 CCL8P80075 99 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 RHOHQ15669 191 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 MIAQ16674 131 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 C1orf195Q5TG92 126 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 TMEM61Q8N0U2 210 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 DAND5Q8N907 189 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 PRORYQ9H606 182 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 EDA2RQ9HAV5 297 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 DSPP15924 2871 aaKnown RBP4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 IGLV9-49A0A0B4J1Y8 123 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 DLX1P56177 255 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 TMEM258P61165 79 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 ODF3L2Q3SX64 289 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 FAM222AQ5U5X8 452 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 DPH3Q96FX2 82 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 LINC00527Q9UJ94 153 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 FAM215AQ9Y5M1 114 aa4.89□□□□□ -1.63
CDKAL1-202ENST00000378610 I3L3M4 83 aa4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 CDX4O14627 284 aaPredicted RBP4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 RPL39P62891 51 aaKnown RBP4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 MRPS36P82909 103 aaKnown RBP4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 TIMM21Q9BVV7 248 aa4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 APOC4P55056 127 aa4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 RPL18AQ02543 176 aaKnown RBP4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 ADAMTSL4-AS1Q5T5F5 129 aa4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 TRBV7-1A0A0A6YYK4 115 aa4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 TMEM86BQ8N661 226 aa4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 C3orf56Q8N813 242 aa4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 OR13C6PQ8NH95 151 aa4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 LINC00477Q96M19 166 aa4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 PYGO1Q9Y3Y4 419 aa4.88□□□□□ -1.63
CDKAL1-202ENST00000378610 BSNQ9UPA5 3926 aa4.87□□□□□ -1.63
CDKAL1-202ENST00000378610 IGHV3OR16-10A0A075B7F0 116 aa4.87□□□□□ -1.63
CDKAL1-202ENST00000378610 TRAV21A0A0B4J279 112 aa4.87□□□□□ -1.63
CDKAL1-202ENST00000378610 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
CDKAL1-202ENST00000378610 SUMO4Q6EEV6 95 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms