RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NXPH4O95158 308 aa9.01□□□□□ -0.97
NPHP4-202ENST00000378161 SOSTDC1Q6X4U4 206 aa9.01□□□□□ -0.97
NPHP4-202ENST00000378161 LY6G5BQ8NDX9 201 aa9.01□□□□□ -0.97
NPHP4-202ENST00000378161 IGHV3-66A0A0C4DH42 116 aa9.01□□□□□ -0.97
NPHP4-202ENST00000378161 BUB1B-PAK6H3BSN5 160 aa9.01□□□□□ -0.97
NPHP4-202ENST00000378161 COX7A2LO14548 114 aa9.01□□□□□ -0.97
NPHP4-202ENST00000378161 C2orf48Q96LS8 159 aa9.01□□□□□ -0.97
NPHP4-202ENST00000378161 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
NPHP4-202ENST00000378161 UBE2L6O14933 153 aa9□□□□□ -0.97
NPHP4-202ENST00000378161 F8WEM9 126 aa9□□□□□ -0.97
NPHP4-202ENST00000378161 ATP5EP2Q5VTU8 51 aa9□□□□□ -0.97
NPHP4-202ENST00000378161 LYPD2Q6UXB3 125 aa9□□□□□ -0.97
NPHP4-202ENST00000378161 CLEC19AQ6UXS0 136 aa9□□□□□ -0.97
NPHP4-202ENST00000378161 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
NPHP4-202ENST00000378161 C17orf77Q96MU5 243 aa9□□□□□ -0.97
NPHP4-202ENST00000378161 SNURFQ9Y675 71 aa9□□□□□ -0.97
NPHP4-202ENST00000378161 PRRC2CQ9Y520 2896 aaKnown RBP9□□□□□ -0.97
NPHP4-202ENST00000378161 TRGV3P03979 118 aa8.99□□□□□ -0.97
NPHP4-202ENST00000378161 C19orf54Q5BKX5 351 aa8.99□□□□□ -0.97
NPHP4-202ENST00000378161 DKK4Q9UBT3 224 aa8.99□□□□□ -0.97
NPHP4-202ENST00000378161 EML6Q6ZMW3 1958 aa8.99□□□□□ -0.97
NPHP4-202ENST00000378161 SDHAF1A6NFY7 115 aa8.99□□□□□ -0.97
NPHP4-202ENST00000378161 HTN1P15515 57 aa8.99□□□□□ -0.97
NPHP4-202ENST00000378161 Q5XG85 94 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 RITA1Q96K30 269 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 TRBV7-6A0A0J9YX20 115 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 C10orf142B7Z368 130 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 NOTCH3Q9UM47 2321 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 NCOR2Q9Y618 2525 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 TMEM223A0PJW6 202 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 ZNF672Q499Z4 452 aaPredicted RBP8.98□□□□□ -0.97
NPHP4-202ENST00000378161 ZNF561-AS1K7EIQ3 104 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 RNF185Q96GF1 192 aa8.98□□□□□ -0.97
NPHP4-202ENST00000378161 TRBV12-3P01733 135 aa8.97□□□□□ -0.97
NPHP4-202ENST00000378161 HOXD3P31249 432 aaPredicted RBP8.97□□□□□ -0.97
NPHP4-202ENST00000378161 BLCAPP62952 87 aa8.97□□□□□ -0.97
NPHP4-202ENST00000378161 UPK3BQ9BT76 320 aa8.97□□□□□ -0.97
NPHP4-202ENST00000378161 A0A0J9YXY3 114 aa8.97□□□□□ -0.97
NPHP4-202ENST00000378161 IGFL4Q6B9Z1 124 aa8.97□□□□□ -0.97
NPHP4-202ENST00000378161 CDH23Q9H251 3354 aa8.96□□□□□ -0.98
NPHP4-202ENST00000378161 PTPRQQ9UMZ3 2332 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 PIEZO2Q9H5I5 2752 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 FAM223BA6NKX1 122 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 LHBP01229 141 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 H3BRN7 92 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 C15orf32Q32M92 178 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 ENHOQ6UWT2 76 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 RPL39LQ96EH5 51 aaKnown RBP8.95□□□□□ -0.98
NPHP4-202ENST00000378161 TRAV7A0A075B6U4 112 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 TRAV13-2A0A0B4J235 113 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 CRIP1P50238 77 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 MIAQ16674 131 aa8.95□□□□□ -0.98
NPHP4-202ENST00000378161 EIF4EBP1Q13541 118 aaPredicted RBP8.94□□□□□ -0.98
NPHP4-202ENST00000378161 Q9HAA7 133 aa8.94□□□□□ -0.98
NPHP4-202ENST00000378161 FUSP35637 526 aaKnown RBP eCLIP8.94□□□□□ -0.98
NPHP4-202ENST00000378161 MINOS1Q5TGZ0 78 aa8.94□□□□□ -0.98
NPHP4-202ENST00000378161 APRG1Q8IVJ8 170 aa8.94□□□□□ -0.98
NPHP4-202ENST00000378161 TIMM17AQ99595 171 aa8.94□□□□□ -0.98
NPHP4-202ENST00000378161 MINOS1-NBL1R4GNA1 71 aa8.94□□□□□ -0.98
NPHP4-202ENST00000378161 A0A0J9YXV3 536 aa8.94□□□□□ -0.98
NPHP4-202ENST00000378161 C9orf139Q6ZV77 190 aa8.94□□□□□ -0.98
NPHP4-202ENST00000378161 LY6EQ16553 131 aa8.93□□□□□ -0.98
NPHP4-202ENST00000378161 VMO1Q7Z5L0 202 aa8.93□□□□□ -0.98
NPHP4-202ENST00000378161 IGF2RP11717 2491 aa8.93□□□□□ -0.98
NPHP4-202ENST00000378161 LYRM9A8MSI8 78 aa8.93□□□□□ -0.98
NPHP4-202ENST00000378161 E7EQL1 145 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 PAX4O43316 350 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 PROP1O75360 226 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 GAS8-AS1O95177 125 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 IGFL3Q6UXB1 125 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 IGHV1OR15-1A0A075B7D0 117 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 IGLV2-11P01706 119 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 ZNF876PQ49A33 203 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 RNASE4P34096 147 aaKnown RBP8.92□□□□□ -0.98
NPHP4-202ENST00000378161 FHL2Q14192 279 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 KAAG1Q9UBP8 84 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 FAM215AQ9Y5M1 114 aa8.92□□□□□ -0.98
NPHP4-202ENST00000378161 PAX8Q06710 450 aa8.91□□□□□ -0.98
NPHP4-202ENST00000378161 ORMDL1Q9P0S3 153 aa8.91□□□□□ -0.98
NPHP4-202ENST00000378161 DEFB121Q5J5C9 76 aa8.91□□□□□ -0.98
NPHP4-202ENST00000378161 IGKV1D-37A0A075B6S9 117 aa8.91□□□□□ -0.98
NPHP4-202ENST00000378161 H0YGX0 51 aa8.91□□□□□ -0.98
NPHP4-202ENST00000378161 RPL39P62891 51 aaKnown RBP8.91□□□□□ -0.98
NPHP4-202ENST00000378161 PLA2G2CQ5R387 149 aa8.91□□□□□ -0.98
NPHP4-202ENST00000378161 IGHV3OR16-10A0A075B7F0 116 aa8.91□□□□□ -0.98
NPHP4-202ENST00000378161 TMEM61Q8N0U2 210 aa8.91□□□□□ -0.98
NPHP4-202ENST00000378161 PLAC8L1A1L4L8 177 aa8.9□□□□□ -0.98
NPHP4-202ENST00000378161 DAZAP2Q15038 168 aaPredicted RBP8.9□□□□□ -0.98
NPHP4-202ENST00000378161 IGHV3-30-3P0DP02 117 aa8.9□□□□□ -0.98
NPHP4-202ENST00000378161 SAA4P35542 130 aa8.9□□□□□ -0.98
NPHP4-202ENST00000378161 SS18Q15532 418 aa8.9□□□□□ -0.98
NPHP4-202ENST00000378161 FAM110DQ8TAY7 271 aaPredicted RBP8.9□□□□□ -0.98
NPHP4-202ENST00000378161 MRPL36Q9P0J6 103 aaKnown RBP8.9□□□□□ -0.98
NPHP4-202ENST00000378161 BPTFQ12830 3046 aa8.9□□□□□ -0.99
NPHP4-202ENST00000378161 IGKV3-20P01619 116 aa8.89□□□□□ -0.99
NPHP4-202ENST00000378161 PRB1P04280 392 aa8.89□□□□□ -0.99
NPHP4-202ENST00000378161 CEP295Q9C0D2 2601 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms